Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3088 Trochodendron aralioides HOM05D005756 ORTHO05D007991 1.8e-265 918.7 460 100.0
Nn1g03213 Nelumbo nucifera HOM05D005756 ORTHO05D007991 2.6e-171 605.9 435 69.0
GSVIVG01030075001 Vitis vinifera HOM05D005756 ORTHO05D007991 7.7e-152 541.2 436 62.8
Peaxi162Scf00802g00236 Petunia axillaris HOM05D005756 ORTHO05D007991 4.7e-149 531.9 440 60.2
Haze_12636 Corylus avellana HOM05D005756 ORTHO05D007991 8.0e-149 531.2 439 60.8
CSS0006225 Camellia sinensis var. sinensis HOM05D005756 ORTHO05D007991 2.3e-148 529.6 435 61.8
FvH4_6g40720 Fragaria vesca HOM05D005756 ORTHO05D007991 3.0e-148 529.3 443 58.5
MD09G1126000 Malus domestica HOM05D005756 ORTHO05D007991 4.0e-148 528.9 441 60.1
Thecc.01G193500 Theobroma cacao HOM05D005756 ORTHO05D007991 6.8e-148 528.1 436 59.4
FAN05G2330 Fragaria x ananassa HOM05D005756 ORTHO05D007991 8.9e-148 527.7 444 58.6
Potri.014G166400 Populus trichocarpa HOM05D005756 ORTHO05D007991 8.9e-148 527.7 440 60.9
FAN09G1647 Fragaria x ananassa HOM05D005756 ORTHO05D007991 2.0e-147 526.6 442 58.1
Oeu021293.1 Olea europaea HOM05D005756 ORTHO05D007991 2.6e-147 526.2 429 60.1
FAN14G2144 Fragaria x ananassa HOM05D005756 ORTHO05D007991 4.4e-147 525.4 443 58.2
RcHm_v2.0_Chr2g0156171 Rosa chinensis HOM05D005756 ORTHO05D007991 2.9e-146 522.7 440 58.6
Sabra14G0126700 Salix brachista HOM05D005756 ORTHO05D007991 4.9e-146 521.9 440 59.5
Peaxi162Scf00218g00178 Petunia axillaris HOM05D005756 ORTHO05D007991 1.1e-145 520.8 447 59.3
Gohir.A07G191400 Gossypium hirsutum HOM05D005756 ORTHO05D007991 3.2e-145 519.2 438 58.4
Manes.12G064800 Manihot esculenta HOM05D005756 ORTHO05D007991 5.4e-145 518.5 437 60.0
Gorai.001G221400 Gossypium raimondii HOM05D005756 ORTHO05D007991 7.0e-145 518.1 436 58.7
COL.COLO4_33341 Corchorus olitorius HOM05D005756 ORTHO05D007991 1.6e-144 516.9 438 58.4
SalBow1G0676 Salvia bowleyana HOM05D005756 ORTHO05D007991 4.6e-144 515.4 426 60.8
CAN.G60.7 Capsicum annuum HOM05D005756 ORTHO05D007991 5.9e-144 515.0 434 59.9
Actinidia35206 Actinidia chinensis HOM05D005756 ORTHO05D007991 1.0e-143 514.2 434 60.6
Actinidia18810 Actinidia chinensis HOM05D005756 ORTHO05D007991 1.7e-143 513.5 430 60.0
Rhsim04G0027400 Rhododendron simsii HOM05D005756 ORTHO05D007991 1.7e-143 513.5 469 57.6
Gorai.001G191800 Gossypium raimondii HOM05D005756 ORTHO05D007991 5.0e-143 511.9 434 57.4
Gohir.D07G171500 Gossypium hirsutum HOM05D005756 ORTHO05D007991 8.6e-143 511.1 434 57.4
Duzib211G0508 Durio zibethinus HOM05D005756 ORTHO05D007991 1.9e-142 510.0 435 57.7
Ciclev10018016m.g Citrus clementina HOM05D005756 ORTHO05D007991 5.6e-142 508.4 449 58.8
CsaV3_6G009540 Cucumis sativus L. HOM05D005756 ORTHO05D007991 5.6e-142 508.4 446 58.3
PSO675G1451 Papaver somniferum HOM05D005756 ORTHO05D007991 5.6e-142 508.4 429 59.2
MELO3C025971.2 Cucumis melo HOM05D005756 ORTHO05D007991 1.6e-141 506.9 431 59.2
Duzib133G1068 Durio zibethinus HOM05D005756 ORTHO05D007991 1.6e-141 506.9 439 57.6
ClCG02G009290 Citrullus lanatus HOM05D005756 ORTHO05D007991 2.8e-141 506.1 431 58.2
Nitab4.5_0000006g0690 Nicotiana tabacum HOM05D005756 ORTHO05D007991 8.0e-141 504.6 424 58.3
Prupe.3G198700 Prunus persica HOM05D005756 ORTHO05D007991 1.4e-140 503.8 455 56.7
CiPaw.03G281000 Carya illinoinensis HOM05D005756 ORTHO05D007991 1.8e-140 503.4 436 58.9
Gohir.A07G164300 Gossypium hirsutum HOM05D005756 ORTHO05D007991 2.3e-140 503.1 434 56.0
SalBow1G7885 Salvia bowleyana HOM05D005756 ORTHO05D007991 3.1e-140 502.7 418 58.1
PSO541G4672 Papaver somniferum HOM05D005756 ORTHO05D007991 2.6e-139 499.6 436 58.3
Dinv26618 Davidia involucrata HOM05D005756 ORTHO05D007991 5.8e-139 498.4 431 58.9
AT5G35770 Arabidopsis thaliana HOM05D005756 ORTHO05D007991 1.3e-138 497.3 439 56.7
Nitab4.5_0010487g0010 Nicotiana tabacum HOM05D005756 ORTHO05D007991 8.3e-138 494.6 424 56.8
AL7G44670 Arabidopsis lyrata HOM05D005756 ORTHO05D007991 1.1e-137 494.2 438 56.4
QL08p028191 Quercus lobata HOM05D005756 ORTHO05D007991 1.4e-137 493.8 457 56.9
Manes.13G062400 Manihot esculenta HOM05D005756 ORTHO05D007991 4.1e-137 492.3 441 55.8
Solyc05g041220.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 7.0e-137 491.5 444 56.5
Oeu052200.1 Olea europaea HOM05D005756 ORTHO05D007991 1.6e-136 490.3 473 53.5
Migut.K00325 Erythranthe guttata HOM05D005756 ORTHO05D007991 4.6e-136 488.8 451 58.1
Sed0018608 Sechium edule HOM05D005756 ORTHO05D007991 1.0e-135 487.6 431 56.6
Sp7g06350 Schrenkiella parvula HOM05D005756 ORTHO05D007991 8.6e-135 484.6 440 56.4
Lsat_1_v5_gn_7_97180 Lactuca sativa HOM05D005756 ORTHO05D007991 1.1e-134 484.2 441 55.3
PGR042G1143 Punica granatum HOM05D005756 ORTHO05D007991 1.1e-134 484.2 417 57.6
Carub.0007s3155 Capsella rubella HOM05D005756 ORTHO05D007991 5.6e-134 481.9 442 55.2
Aa31sc373G50 Aethionema arabicum HOM05D005756 ORTHO05D007991 2.8e-133 479.6 441 54.9
A04p10010 Brassica napus HOM05D005756 ORTHO05D007991 1.4e-132 477.2 452 54.6
BraA04t16663Z Brassica rapa HOM05D005756 ORTHO05D007991 1.4e-132 477.2 452 54.6
Aqoxy4G02252 Aquilegia oxysepala HOM05D005756 ORTHO05D007991 4.0e-132 475.7 438 57.3
HanXRQChr11g0328881 Helianthus annuus HOM05D005756 ORTHO05D007991 1.2e-131 474.2 438 54.3
Hma1.2p1_0545F.1_g176030 Hydrangea macrophylla HOM05D005756 ORTHO05D007991 1.2e-131 474.2 384 63.0
BcaC02g09499 Brassica carinata HOM05D005756 ORTHO05D007991 2.0e-131 473.4 452 54.4
Cc00_g15460 Coffea canephora HOM05D005756 ORTHO05D007991 2.6e-131 473.0 382 61.8
BcaB06g26996 Brassica carinata HOM05D005756 ORTHO05D007991 4.4e-131 472.2 452 54.2
BolC4t25929H Brassica oleracea HOM05D005756 ORTHO05D007991 9.8e-131 471.1 452 54.2
THA.LOC104815437 Tarenaya hassleriana HOM05D005756 ORTHO05D007991 9.8e-131 471.1 437 55.1
C04p43490 Brassica napus HOM05D005756 ORTHO05D007991 1.7e-130 470.3 452 54.2
MD17G1116000 Malus domestica HOM05D005756 ORTHO05D007991 2.9e-130 469.5 375 60.3
ECA236G0821 Erigeron canadensis HOM05D005756 ORTHO05D007991 1.1e-129 467.6 431 56.1
Sed0020254 Sechium edule HOM05D005756 ORTHO05D007991 1.4e-129 467.2 419 56.1
Gohir.D07G197700 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.7e-127 460.3 379 59.1
Migut.J01345 Erythranthe guttata HOM05D005756 ORTHO05D007991 3.9e-127 459.1 459 54.0
Nitab4.5_0005267g0030 Nicotiana tabacum HOM05D005756 ORTHO05D007991 1.5e-126 457.2 383 59.0
CDE06G1141 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 1.6e-125 453.8 420 52.1
CANSAT64G2821 Cannabis sativa HOM05D005756 ORTHO05D007991 2.3e-124 449.9 436 51.8
Solyc07g045550.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 1.3e-122 444.1 379 57.5
DCAR_019686 Daucus carota HOM05D005756 ORTHO05D001984 3.8e-122 442.6 371 59.3
Sc21g0000630 Simmondsia chinensis HOM05D005756 ORTHO05D007991 4.9e-122 442.2 417 53.5
Oeu027646.1 Olea europaea HOM05D005756 ORTHO05D007991 1.9e-121 440.3 392 55.6
unitig_0.g2684 Utricularia gibba HOM05D005756 ORTHO05D007991 3.2e-121 439.5 503 48.5
vmacro09483 Vaccinium macrocarpon HOM05D005756 ORTHO05D007991 4.1e-121 439.1 383 56.7
Thhalv10005699m.g Eutrema salsugineum HOM05D005756 ORTHO05D007991 6.0e-120 435.3 387 56.1
Lj1C795T0 Lonicera japonica HOM05D005756 ORTHO05D007991 3.9e-119 432.6 380 58.2
Ah.01g013810 Amaranthus hybridus HOM05D005756 ORTHO05D007991 1.5e-115 420.6 437 51.5
PGSC0003DMG400018834 Solanum tuberosum HOM05D005756 ORTHO05D007991 2.2e-114 416.8 379 55.4
SHI10154 Sapria himalayana HOM05D005756 ORTHO05D007991 4.9e-114 415.6 382 53.9
Eucgr.A01028 Eucalyptus grandis HOM05D005756 ORTHO05D007991 6.4e-114 415.2 381 55.9
AUR62015018 Chenopodium quinoa HOM05D005756 ORTHO05D007991 1.9e-113 413.7 436 49.8
HanXRQChr04g0126551 Helianthus annuus HOM05D005756 ORTHO05D007991 2.4e-113 413.3 378 55.6
Psat2g005040 Pisum sativum HOM05D005756 ORTHO05D007991 3.9e-111 406.0 447 50.3
TPR.G1270 Trifolium pratense HOM05D005756 ORTHO05D007991 2.5e-110 403.3 445 48.8
CARHR216780 Cardamine hirsuta HOM05D005756 ORTHO05D007991 4.3e-110 402.5 349 57.0
Medtr5g097060 Medicago truncatula HOM05D005756 ORTHO05D007991 7.3e-110 401.7 438 50.7
LjContig00081g0010185 Lotus japonicus HOM05D005756 ORTHO05D007991 9.0e-108 394.8 450 49.1
Lalb_Chr10g0107581 Lupinus albus HOM05D005756 ORTHO05D007991 1.7e-106 390.6 431 48.7
SGA_v2.0_scaffold265G46105 Striga asiatica HOM05D005756 ORTHO05D007991 1.4e-105 387.5 430 49.3
Sopen05g025200 Solanum pennellii HOM05D005756 ORTHO05D000001 3.2e-105 386.3 433 49.4
Cpa.g.sc211.22 Carica papaya HOM05D005756 ORTHO05D007991 1.8e-103 380.6 322 56.5
Glyma.02G304600 Glycine max HOM05D005756 ORTHO05D007991 5.1e-103 379.0 438 48.6
EL10Ac9g22689 Beta vulgaris HOM05D005756 ORTHO05D007991 2.5e-102 376.7 400 50.5
Oeu032118.1 Olea europaea HOM05D005756 ORTHO05D007991 7.4e-102 375.2 444 47.1
Phvul.008G284100 Phaseolus vulgaris HOM05D005756 ORTHO05D007991 1.3e-101 374.4 435 47.4
arahy.Tifrunner.gnm1.ann1.5EZV1I Arachis hypogaea HOM05D005756 ORTHO05D007991 5.3e-100 369.0 440 45.5
arahy.Tifrunner.gnm1.ann1.P22I4F Arachis hypogaea HOM05D005756 ORTHO05D007991 9.0e-100 368.2 440 45.5
SEGI_35519 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 9.0e-100 368.2 430 45.6
SEGI_03134 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 1.5e-99 367.5 455 42.9
VMungo0647G0888 Vigna mungo HOM05D005756 ORTHO05D007991 2.0e-99 367.1 455 46.4
Atru.chr6.3377 Acer truncatum HOM05D005756 ORTHO05D007991 2.2e-98 363.6 333 56.5
SEGI_14875 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 1.9e-97 360.5 463 42.5
SGA_v2.0_scaffold12G05997 Striga asiatica HOM05D005756 ORTHO05D007991 4.6e-96 355.9 384 50.3
HPP92_014030 Vanilla planifolia HOM05D005756 ORTHO05D007991 2.8e-93 346.7 451 46.1
HPP92_028362 Vanilla planifolia HOM05D005756 ORTHO05D007991 2.8e-93 346.7 452 46.5
ATR0624G001 Amborella trichopoda HOM05D005756 ORTHO05D007991 4.8e-93 345.9 415 44.8
Ca_06445_v3 Cicer arietinum L. HOM05D005756 ORTHO05D007991 1.2e-91 341.3 399 46.9
TWI18G0016 Tripterygium wilfordii HOM05D005756 ORTHO05D007991 1.0e-90 338.2 440 41.8
unitig_748.g7200 Utricularia gibba HOM05D005756 ORTHO05D007991 6.0e-88 328.9 429 45.0
CANSAT64G2382 Cannabis sativa HOM05D005756 ORTHO05D007991 1.0e-87 328.2 297 53.9
Gohir.D11G156320 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.2e-83 314.7 457 40.5
CDE04G3001 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 5.5e-81 305.8 423 40.0
Glyma.14G009200 Glycine max HOM05D005756 ORTHO05D007991 1.8e-79 300.8 349 47.9
SEGI_34368 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 5.7e-78 295.8 387 41.6
AUR62029095 Chenopodium quinoa HOM05D005756 ORTHO05D007991 3.9e-71 273.1 267 53.2
SMO364G0494 Selaginella moellendorffii HOM05D005756 ORTHO05D007991 4.5e-59 233.0 407 34.6
Dinv21286 Davidia involucrata HOM05D005756 ORTHO05D007991 5.5e-49 199.5 278 42.4
MBI19_g37437_MAGBIO Magnolia biondii HOM05D005756 ORTHO05D007991 1.3e-37 161.8 132 62.9
SGA_v2.0_scaffold12G05995 Striga asiatica HOM05D002374 ORTHO05D406151 6.0e-27 126.3 149 46.3
Cpa.g.sc211.21 Carica papaya HOM05D005756 ORTHO05D018916 1.4e-15 88.6 68 70.6
SEGI_18115 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 8.9e-15 85.9 99 43.4
Hma1.2p1_0545F.1_g176010 Hydrangea macrophylla HOM05D005756 ORTHO05D018916 5.4e-12 76.6 52 71.2
Dinv21288 Davidia involucrata HOM05D005756 ORTHO05D018916 3.5e-11 73.9 52 65.4
Lj1C795T1 Lonicera japonica HOM05D005756 ORTHO05D018916 2.3e-10 71.2 86 55.8
DCAR_019685 Daucus carota HOM05D005756 ORTHO05D018916 5.1e-10 70.1 61 59.0
Oeu027645.1 Olea europaea HOM05D005756 ORTHO05D018916 3.3e-09 67.4 52 69.2
Sc21g0000680 Simmondsia chinensis HOM05D005756 ORTHO05D018916 4.4e-06 57.0 43 60.5


User provided reference genes

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