Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3076 Trochodendron aralioides HOM05D004935 ORTHO05D005676 1.9e-93 346.3 236 100.0
TAR622G0462 Trochodendron aralioides HOM05D004935 ORTHO05D005676 4.7e-60 235.3 235 62.1
Nn4g24526 Nelumbo nucifera HOM05D004935 ORTHO05D005676 2.7e-52 209.5 232 56.0
Aqoxy3G04045 Aquilegia oxysepala HOM05D004935 ORTHO05D005676 1.8e-48 196.8 198 57.6
Dinv28224 Davidia involucrata HOM05D004935 ORTHO05D005676 4.5e-47 192.2 232 56.5
Hma1.2p1_0034F.1_g021280 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 5.0e-46 188.7 236 50.4
FAN28G0886 Fragaria x ananassa HOM05D004935 ORTHO05D005676 1.2e-44 184.1 206 51.9
CANSAT78G0803 Cannabis sativa HOM05D004935 ORTHO05D005676 4.7e-44 182.2 217 54.8
CiPaw.03G075500 Carya illinoinensis HOM05D004935 ORTHO05D005676 4.7e-44 182.2 226 51.8
Prupe.3G163400 Prunus persica HOM05D004935 ORTHO05D005676 6.1e-44 181.8 207 52.7
Thecc.04G001700 Theobroma cacao HOM05D004935 ORTHO05D005676 8.0e-44 181.4 195 55.4
FvH4_1g28640 Fragaria vesca HOM05D004935 ORTHO05D005676 1.2e-42 177.6 203 51.7
MD09G1265200 Malus domestica HOM05D004935 ORTHO05D005676 1.2e-42 177.6 229 48.0
Ciclev10029179m.g Citrus clementina HOM05D004935 ORTHO05D005676 2.6e-42 176.4 194 56.7
Rhsim10G0182800 Rhododendron simsii HOM05D004935 ORTHO05D005676 2.6e-42 176.4 238 49.6
RcHm_v2.0_Chr3g0492651 Rosa chinensis HOM05D004935 ORTHO05D005676 2.6e-42 176.4 198 52.0
Manes.02G079800 Manihot esculenta HOM05D004935 ORTHO05D005676 4.4e-42 175.6 187 55.6
TWI53G1040 Tripterygium wilfordii HOM05D004935 ORTHO05D005676 4.4e-42 175.6 195 53.8
MD17G1261400 Malus domestica HOM05D004935 ORTHO05D005676 7.5e-42 174.9 229 48.9
Actinidia01601 Actinidia chinensis HOM05D004935 ORTHO05D005676 1.7e-41 173.7 230 49.6
FAN26G0615 Fragaria x ananassa HOM05D004935 ORTHO05D005676 2.2e-41 173.3 225 47.1
Manes.01G121800 Manihot esculenta HOM05D004935 ORTHO05D005676 2.8e-41 172.9 195 52.8
MBI13_g35399_MAGBIO Magnolia biondii HOM05D004935 ORTHO05D005676 6.3e-41 171.8 234 47.4
Duzib138G1863 Durio zibethinus HOM05D004935 ORTHO05D005676 8.3e-41 171.4 202 52.5
CiPaw.04G048500 Carya illinoinensis HOM05D004935 ORTHO05D005676 1.1e-40 171.0 223 49.8
PSO170G5471 Papaver somniferum HOM05D004935 ORTHO05D005676 1.4e-40 170.6 199 51.8
Gohir.A07G073800 Gossypium hirsutum HOM05D004935 ORTHO05D005676 5.4e-40 168.7 196 52.6
Actinidia17180 Actinidia chinensis HOM05D004935 ORTHO05D005676 9.1e-40 167.9 230 48.3
Hma1.2p1_0158F.1_g069850 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 1.2e-39 167.5 247 45.7
CSS0027542 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 1.6e-39 167.2 222 47.7
vmacro20490 Vaccinium macrocarpon HOM05D004935 ORTHO05D005676 1.6e-39 167.2 211 50.2
QL02p059972 Quercus lobata HOM05D004935 ORTHO05D005676 2.0e-39 166.8 195 51.3
COL.COLO4_19777 Corchorus olitorius HOM05D004935 ORTHO05D005676 2.7e-39 166.4 190 54.2
arahy.Tifrunner.gnm1.ann1.5XP26J Arachis hypogaea HOM05D004935 ORTHO05D005676 4.5e-39 165.6 191 52.4
Lj4A255T23 Lonicera japonica HOM05D004935 ORTHO05D005676 4.5e-39 165.6 192 53.6
PSO407G0171 Papaver somniferum HOM05D004935 ORTHO05D005676 4.5e-39 165.6 198 51.0
Sabra04G0054800 Salix brachista HOM05D004935 ORTHO05D005676 5.9e-39 165.2 191 49.7
Gohir.D07G078500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 7.7e-39 164.9 196 55.6
Nitab4.5_0002465g0010 Nicotiana tabacum HOM05D004935 ORTHO05D005676 7.7e-39 164.9 235 45.1
Potri.004G082300 Populus trichocarpa HOM05D004935 ORTHO05D005676 7.7e-39 164.9 196 50.5
Duzib133G0236 Durio zibethinus HOM05D004935 ORTHO05D005676 1.0e-38 164.5 195 52.3
Nitab4.5_0001088g0190 Nicotiana tabacum HOM05D004935 ORTHO05D005676 1.1e-37 161.0 191 51.8
Migut.K01110 Erythranthe guttata HOM05D004935 ORTHO05D005676 3.3e-37 159.5 201 47.8
Gorai.001G082900 Gossypium raimondii HOM05D004935 ORTHO05D005676 3.3e-37 159.5 198 55.1
TPR.G12527 Trifolium pratense HOM05D004935 ORTHO05D005676 3.3e-37 159.5 232 45.7
Medtr5g091900 Medicago truncatula HOM05D004935 ORTHO05D005676 5.6e-37 158.7 193 49.7
Cc07_g13020 Coffea canephora HOM05D004935 ORTHO05D005676 7.2e-37 158.3 225 53.8
Glyma.11G213800 Glycine max HOM05D004935 ORTHO05D005676 7.2e-37 158.3 226 45.6
Actinidia28792 Actinidia chinensis HOM05D004935 ORTHO05D005676 1.6e-36 157.1 228 43.9
Gohir.A11G169300 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.6e-36 157.1 191 51.8
Oeu032311.1 Olea europaea HOM05D004935 ORTHO05D005676 2.1e-36 156.8 232 44.4
Peaxi162Scf00078g00178 Petunia axillaris HOM05D004935 ORTHO05D005676 2.1e-36 156.8 227 45.8
PGSC0003DMG400013258 Solanum tuberosum HOM05D004935 ORTHO05D005676 2.1e-36 156.8 202 49.0
Dinv19063 Davidia involucrata HOM05D004935 ORTHO05D005676 3.6e-36 156.0 182 51.1
MSTRG.3688 Avicennia marina HOM05D004935 ORTHO05D005676 6.1e-36 155.2 224 45.1
Lj6g0018793 Lotus japonicus HOM05D004935 ORTHO05D005676 8.0e-36 154.8 192 51.0
Ca_06292_v3 Cicer arietinum L. HOM05D004935 ORTHO05D005676 1.0e-35 154.5 231 44.6
Sopen11g006600 Solanum pennellii HOM05D004935 ORTHO05D005676 2.3e-35 153.3 194 50.5
Gorai.007G188100 Gossypium raimondii HOM05D004935 ORTHO05D005676 3.0e-35 152.9 192 50.5
Gohir.D11G175500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 5.2e-35 152.1 192 50.5
Atru.chr1.1949 Acer truncatum HOM05D004935 ORTHO05D005676 6.8e-35 151.8 163 55.8
Glyma.18G042900 Glycine max HOM05D004935 ORTHO05D005676 6.8e-35 151.8 191 50.3
SGA_v2.0_scaffold45G17134 Striga asiatica HOM05D004935 ORTHO05D005676 1.5e-34 150.6 253 41.9
Cfa007772 Carpinus fangiana HOM05D004935 ORTHO05D005676 2.6e-34 149.8 295 40.7
CDE11G1189 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 3.4e-34 149.4 220 47.7
Solyc11g011760.3 Solanum lycopersicum HOM05D004935 ORTHO05D005676 5.7e-34 148.7 190 50.5
ClCG01G008740 Citrullus lanatus HOM05D004935 ORTHO05D005676 4.9e-33 145.6 229 42.8
Lj2A514G44 Lonicera japonica HOM05D004935 ORTHO05D005676 4.9e-33 145.6 245 41.6
Eucgr.J01625 Eucalyptus grandis HOM05D004935 ORTHO05D005676 8.3e-33 144.8 195 44.6
Sc11g0004790 Simmondsia chinensis HOM05D004935 ORTHO05D005676 1.1e-32 144.4 235 50.2
CsaV3_5G024270 Cucumis sativus L. HOM05D004935 ORTHO05D005676 1.4e-32 144.1 230 42.2
THA.LOC104820912 Tarenaya hassleriana HOM05D004935 ORTHO05D005676 1.4e-32 144.1 187 47.6
Hund13074 Selenicereus undatus HOM05D004935 ORTHO05D005676 3.2e-32 142.9 226 41.2
Phvul.001G228000 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 5.4e-32 142.1 190 47.9
PGR042G3611 Punica granatum HOM05D004935 ORTHO05D005676 5.4e-32 142.1 210 44.8
MELO3C025122.2 Cucumis melo HOM05D004935 ORTHO05D005676 7.0e-32 141.7 230 42.2
arahy.Tifrunner.gnm1.ann1.PKWW5Q Arachis hypogaea HOM05D004935 ORTHO05D005676 9.2e-32 141.4 166 53.0
CDE05G2820 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 2.0e-31 140.2 218 46.8
Oeu029081.1 Olea europaea HOM05D004935 ORTHO05D005676 2.7e-31 139.8 200 45.5
arahy.Tifrunner.gnm1.ann1.63R0A2 Arachis hypogaea HOM05D004935 ORTHO05D005676 4.6e-31 139.0 219 47.9
Lalb_Chr18g0053611 Lupinus albus HOM05D004935 ORTHO05D005676 5.9e-31 138.7 193 44.6
VMungo1383G0526 Vigna mungo HOM05D004935 ORTHO05D005676 5.9e-31 138.7 191 45.0
arahy.Tifrunner.gnm1.ann1.8KIW52 Arachis hypogaea HOM05D004935 ORTHO05D005676 1.3e-30 137.5 218 42.7
Psat2g014520 Pisum sativum HOM05D004935 ORTHO05D005676 1.3e-30 137.5 154 55.2
SalBow3G4475 Salvia bowleyana HOM05D004935 ORTHO05D005676 1.3e-30 137.5 217 43.3
Lalb_Chr10g0104161 Lupinus albus HOM05D004935 ORTHO05D005676 3.0e-30 136.3 203 43.3
unitig_748.g8451 Utricularia gibba HOM05D004935 ORTHO05D005676 7.3e-29 131.7 218 40.8
Zm00001eb179280 Zea mays HOM05D004935 ORTHO05D005676 1.2e-28 131.0 200 42.5
HPP92_017642 Vanilla planifolia HOM05D004935 ORTHO05D005676 2.1e-28 130.2 226 40.3
Psat2g044600 Pisum sativum HOM05D004935 ORTHO05D005676 2.8e-28 129.8 187 45.5
Zm00001eb041900 Zea mays HOM05D004935 ORTHO05D005676 6.2e-28 128.6 200 42.0
BolC3t13402H Brassica oleracea HOM05D004935 ORTHO05D005676 1.4e-27 127.5 161 47.8
Thhalv10014473m.g Eutrema salsugineum HOM05D004935 ORTHO05D005676 1.8e-27 127.1 197 54.3
AL6G27510 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 2.3e-27 126.7 214 40.2
Aa31LG11G13100 Aethionema arabicum HOM05D004935 ORTHO05D005676 5.2e-27 125.6 185 53.0
Carub.0006s1475 Capsella rubella HOM05D004935 ORTHO05D005676 1.2e-26 124.4 217 39.2
LjContig00141g0002036 Lotus japonicus HOM05D004935 ORTHO05D005676 1.2e-26 124.4 189 45.0
Sc11g0004530 Simmondsia chinensis HOM05D004935 ORTHO05D005676 1.2e-26 124.4 235 51.1
Sp6g27610 Schrenkiella parvula HOM05D004935 ORTHO05D005676 2.0e-26 123.6 196 53.1
TPR.G9990 Trifolium pratense HOM05D004935 ORTHO05D005676 2.6e-26 123.2 218 39.9
AT5G16550 Arabidopsis thaliana HOM05D004935 ORTHO05D005676 3.4e-26 122.9 214 38.3
BcaC04g18869 Brassica carinata HOM05D004935 ORTHO05D005676 5.8e-26 122.1 133 51.9
A10p22660 Brassica napus HOM05D004935 ORTHO05D005676 7.5e-26 121.7 134 52.2
BraA10t44327Z Brassica rapa HOM05D004935 ORTHO05D005676 7.5e-26 121.7 134 52.2
C09p60610 Brassica napus HOM05D004935 ORTHO05D005676 9.8e-26 121.3 133 51.1
BolC9t58894H Brassica oleracea HOM05D004935 ORTHO05D005676 9.8e-26 121.3 133 51.1
Lalb_Chr17g0345951 Lupinus albus HOM05D004935 ORTHO05D005676 2.2e-25 120.2 185 40.5
BcaB01g04976 Brassica carinata HOM05D004935 ORTHO05D005676 2.9e-25 119.8 132 51.5
BcaC03g18499 Brassica carinata HOM05D004935 ORTHO05D005676 3.7e-25 119.4 180 42.2
BraA03t10111Z Brassica rapa HOM05D000423 ORTHO05D005676 3.7e-25 119.4 137 48.2
BcaB08g36840 Brassica carinata HOM05D004935 ORTHO05D005676 6.4e-25 118.6 133 50.4
C03p09070 Brassica napus HOM05D004935 ORTHO05D005676 6.4e-25 118.6 168 42.9
Lsat_1_v5_gn_8_111520 Lactuca sativa HOM05D004935 ORTHO05D005676 1.4e-24 117.5 221 38.9
A03p07850 Brassica napus HOM05D004935 ORTHO05D005676 4.1e-24 115.9 172 42.4
Phvul.008G238800 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 7.0e-24 115.2 147 50.3
A02p03620 Brassica napus HOM05D004935 ORTHO05D005676 2.7e-23 113.2 181 43.6
EL10Ac2g03209 Beta vulgaris HOM05D004935 ORTHO05D005676 3.5e-23 112.8 155 47.1
Medtr5g077280 Medicago truncatula HOM05D004935 ORTHO05D005676 3.5e-23 112.8 163 44.8
BraA02t05331Z Brassica rapa HOM05D004935 ORTHO05D005676 7.8e-23 111.7 134 50.7
Glyma.02G242200 Glycine max HOM05D004935 ORTHO05D005676 2.3e-22 110.2 147 46.9
VMungo0647G1435 Vigna mungo HOM05D004935 ORTHO05D005676 6.6e-22 108.6 223 41.3
BcaC03g18497 Brassica carinata HOM05D004935 ORTHO05D005676 8.6e-22 108.2 132 50.0
C02p08410 Brassica napus HOM05D004935 ORTHO05D005676 8.6e-22 108.2 132 50.0
BolC2t06759H Brassica oleracea HOM05D004935 ORTHO05D005676 8.6e-22 108.2 132 50.0
HanXRQChr15g0489811 Helianthus annuus HOM05D004935 ORTHO05D005676 1.1e-19 101.3 165 45.5
AL3G36180 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 1.4e-19 100.9 118 46.6
GSVIVG01026318001 Vitis vinifera HOM05D004935 ORTHO05D005676 5.2e-19 99.0 75 73.3
AL92U10070 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 4.4e-18 95.9 111 47.7
Sed0000771 Sechium edule HOM05D004935 ORTHO05D005676 5.8e-18 95.5 229 39.7
Haze_14300 Corylus avellana HOM05D004935 ORTHO05D005676 2.1e-15 87.0 284 36.3
FAN19G0113 Fragaria x ananassa HOM05D004935 ORTHO05D005676 2.1e-15 87.0 84 54.8
AL6G14310 Arabidopsis lyrata HOM05D000097 ORTHO05D005676 1.7e-14 84.0 112 45.5
AagrBONN_evm.TU.Sc2ySwM_117.2252 Anthoceros agrestis HOM05D004935 ORTHO05D005676 1.1e-13 81.3 102 45.1
Oeu014715.1 Olea europaea HOM05D004935 ORTHO05D005676 1.1e-13 81.3 127 40.2
MSTRG.15645 Avicennia marina HOM05D004935 ORTHO05D005676 1.9e-13 80.5 87 48.3
Cpa.g.sc178.1 Carica papaya HOM05D004935 ORTHO05D005676 5.6e-13 79.0 99 49.5
ECA246G1322 Erigeron canadensis HOM05D004935 ORTHO05D005676 7.3e-13 78.6 81 56.8
CARHR196690 Cardamine hirsuta HOM05D004935 ORTHO05D005676 1.6e-12 77.4 104 46.2
Mapoly0035s0070 Marchantia polymorpha HOM05D004935 ORTHO05D005676 2.3e-11 73.6 105 40.0
Zm00001eb099130 Zea mays HOM05D004935 ORTHO05D005676 1.5e-10 70.9 91 44.0
Peaxi162Scf00085g00527 Petunia axillaris HOM05D004935 ORTHO05D005676 2.2e-09 67.0 89 47.2
DCAR_003417 Daucus carota HOM05D004935 ORTHO05D005676 7.1e-08 62.0 109 36.7
DCAR_003418 Daucus carota HOM05D004935 ORTHO05D005676 1.0e-06 58.2 104 40.4


User provided reference genes

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