Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3061 Trochodendron aralioides HOM05D007498 ORTHO05D009384 3.9e-213 744.6 389 100.0
Dinv08726 Davidia involucrata HOM05D007498 ORTHO05D009384 1.7e-155 553.1 401 73.1
CSS0038240 Camellia sinensis var. sinensis HOM05D007498 ORTHO05D009384 1.0e-149 533.9 398 71.1
GSVIVG01030496001 Vitis vinifera HOM05D007498 ORTHO05D009384 6.8e-149 531.2 395 72.7
QL08p030918 Quercus lobata HOM05D007498 ORTHO05D009384 4.9e-147 525.0 384 70.8
Nn1g03383 Nelumbo nucifera HOM05D007498 ORTHO05D009384 1.8e-146 523.1 390 70.5
Actinidia09741 Actinidia chinensis HOM05D007498 ORTHO05D009384 2.0e-145 519.6 393 70.7
Actinidia13735 Actinidia chinensis HOM05D007498 ORTHO05D009384 2.7e-145 519.2 379 72.8
CiPaw.03G155900 Carya illinoinensis HOM05D007498 ORTHO05D009384 2.7e-145 519.2 397 69.3
MBI19_g41387_MAGBIO Magnolia biondii HOM05D007498 ORTHO05D009384 5.9e-145 518.1 390 67.9
Hma1.2p1_2381F.1_g320980 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 6.6e-144 514.6 398 68.6
Hma1.2p1_0445F.1_g154420 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 1.5e-143 513.5 398 68.8
Manes.12G070200 Manihot esculenta HOM05D007498 ORTHO05D009384 1.9e-143 513.1 395 68.1
PSO541G2474 Papaver somniferum HOM05D007498 ORTHO05D009384 6.1e-142 508.1 381 67.5
Aqoxy1G04193 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 2.6e-140 502.7 370 70.3
Rhsim06G0166900 Rhododendron simsii HOM05D007498 ORTHO05D009384 3.4e-140 502.3 441 62.8
Rhsim09G0054300 Rhododendron simsii HOM05D007498 ORTHO05D009384 3.4e-140 502.3 441 62.6
PSO675G1300 Papaver somniferum HOM05D007498 ORTHO05D009384 6.4e-139 498.0 427 61.6
Ciclev10015493m.g Citrus clementina HOM05D007498 ORTHO05D009384 1.9e-138 496.5 393 68.4
Thecc.01G181300 Theobroma cacao HOM05D007498 ORTHO05D009384 1.7e-136 490.0 388 66.8
COL.COLO4_21864 Corchorus olitorius HOM05D007498 ORTHO05D009384 1.5e-135 486.9 387 65.6
Prupe.3G211200 Prunus persica HOM05D007498 ORTHO05D009384 4.3e-135 485.3 393 64.9
TWI18G0826 Tripterygium wilfordii HOM05D007498 ORTHO05D009384 4.3e-135 485.3 383 65.8
vmacro12166 Vaccinium macrocarpon HOM05D007498 ORTHO05D009384 4.3e-135 485.3 472 58.1
CANSAT64G1398 Cannabis sativa HOM05D007498 ORTHO05D009384 7.3e-135 484.6 385 63.4
Eucgr.A01096 Eucalyptus grandis HOM05D007498 ORTHO05D009384 1.1e-133 480.7 404 63.6
Sabra14G0119400 Salix brachista HOM05D007498 ORTHO05D009384 5.2e-133 478.4 418 62.7
Sc21g0001170 Simmondsia chinensis HOM05D007498 ORTHO05D009384 8.9e-133 477.6 393 63.1
MD17G1103400 Malus domestica HOM05D007498 ORTHO05D009384 5.8e-132 474.9 395 63.3
Cc05_g03070 Coffea canephora HOM05D007498 ORTHO05D009384 3.2e-130 469.2 370 64.9
Lj1A780G53 Lonicera japonica HOM05D007498 ORTHO05D009384 3.2e-130 469.2 399 61.7
Gohir.A07G187000 Gossypium hirsutum HOM05D007498 ORTHO05D009384 4.1e-130 468.8 386 64.2
Gorai.001G216600 Gossypium raimondii HOM05D007498 ORTHO05D009384 7.1e-130 468.0 386 64.0
RcHm_v2.0_Chr2g0158311 Rosa chinensis HOM05D007498 ORTHO05D009384 1.7e-128 463.4 395 63.0
Lj6g0022389 Lotus japonicus HOM05D007498 ORTHO05D009384 3.3e-127 459.1 391 62.1
Sopen05g026100 Solanum pennellii HOM05D007498 ORTHO05D009384 3.3e-127 459.1 371 63.9
FvH4_6g42420 Fragaria vesca HOM05D007498 ORTHO05D009384 7.3e-127 458.0 388 61.6
Solyc05g042050.4 Solanum lycopersicum HOM05D007498 ORTHO05D009384 1.4e-125 453.8 371 63.1
Sp3g24210 Schrenkiella parvula HOM05D007498 ORTHO05D009384 2.3e-125 453.0 377 64.5
AL3G43270 Arabidopsis lyrata HOM05D007498 ORTHO05D009384 8.9e-125 451.1 371 63.9
PGR042G1731 Punica granatum HOM05D007498 ORTHO05D009384 8.9e-125 451.1 397 61.7
Carub.0003s2696 Capsella rubella HOM05D007498 ORTHO05D009384 1.2e-124 450.7 377 63.1
FAN05G5059 Fragaria x ananassa HOM05D007498 ORTHO05D009384 1.2e-124 450.7 386 60.6
Phvul.006G012811 Phaseolus vulgaris HOM05D007498 ORTHO05D009384 1.5e-124 450.3 387 61.5
Nitab4.5_0006063g0010 Nicotiana tabacum HOM05D007498 ORTHO05D009384 2.6e-124 449.5 366 63.7
Medtr3g080260 Medicago truncatula HOM05D007498 ORTHO05D009384 5.8e-124 448.4 405 59.5
AT2G05755 Arabidopsis thaliana HOM05D007498 ORTHO05D009384 2.9e-123 446.0 379 63.1
TPR.G34497 Trifolium pratense HOM05D007498 ORTHO05D009384 2.9e-123 446.0 395 59.2
A03p44690 Brassica napus HOM05D007498 ORTHO05D009384 1.4e-122 443.7 376 62.2
Nitab4.5_0000019g0370 Nicotiana tabacum HOM05D007498 ORTHO05D009384 1.9e-122 443.4 352 64.2
CARHR103340 Cardamine hirsuta HOM05D007498 ORTHO05D009384 4.1e-122 442.2 373 61.7
BcaB08g34508 Brassica carinata HOM05D007498 ORTHO05D009384 9.2e-122 441.0 376 63.3
HanXRQChr12g0373631 Helianthus annuus HOM05D007498 ORTHO05D009384 1.2e-121 440.7 379 60.7
BcaC01g03153 Brassica carinata HOM05D007498 ORTHO05D009384 2.7e-121 439.5 376 62.0
C03p55520 Brassica napus HOM05D007498 ORTHO05D009384 2.7e-121 439.5 376 61.7
Lsat_1_v5_gn_5_123880 Lactuca sativa HOM05D007498 ORTHO05D009384 4.6e-121 438.7 380 59.7
Aa31LG8G11370 Aethionema arabicum HOM05D007498 ORTHO05D009384 7.8e-121 438.0 370 61.6
THA.LOC104815344 Tarenaya hassleriana HOM05D007498 ORTHO05D009384 7.8e-121 438.0 390 59.5
Peaxi162Scf00100g01524 Petunia axillaris HOM05D007498 ORTHO05D009384 6.6e-120 434.9 339 67.0
BraA03t13603Z Brassica rapa HOM05D007498 ORTHO05D009384 1.5e-119 433.7 389 60.2
BolC3t17828H Brassica oleracea HOM05D000228 ORTHO05D001122 1.6e-118 430.3 389 59.6
CsaV3_6G037690 Cucumis sativus L. HOM05D007498 ORTHO05D009384 1.4e-117 427.2 387 58.7
Gorai.001G095600 Gossypium raimondii HOM05D007498 ORTHO05D009384 3.1e-117 426.0 397 58.9
ATR0059G023 Amborella trichopoda HOM05D007498 ORTHO05D009384 3.4e-116 422.5 395 57.7
Lsat_1_v5_gn_7_95281 Lactuca sativa HOM05D007498 ORTHO05D009384 5.8e-116 421.8 386 55.7
Sed0020195 Sechium edule HOM05D007498 ORTHO05D009384 1.3e-115 420.6 383 58.0
MD09G1113300 Malus domestica HOM05D007498 ORTHO05D009384 5.6e-111 405.2 331 62.8
Gohir.D07G193500 Gossypium hirsutum HOM05D007498 ORTHO05D009384 4.8e-110 402.1 316 66.1
Duzib138G1101 Durio zibethinus HOM05D007498 ORTHO05D009384 9.9e-108 394.4 397 57.9
ClCG07G002420 Citrullus lanatus HOM05D007498 ORTHO05D009384 2.5e-95 353.2 394 51.3
MELO3C014431.2 Cucumis melo HOM05D007498 ORTHO05D009384 1.1e-93 347.8 412 49.5
Thhalv10002583m.g Eutrema salsugineum HOM05D007498 ORTHO05D009384 2.3e-88 330.1 373 53.4
Gohir.A07G083200 Gossypium hirsutum HOM05D007498 ORTHO05D009384 3.9e-88 329.3 280 63.9
Gohir.D07G089300 Gossypium hirsutum HOM05D007498 ORTHO05D009384 6.7e-88 328.6 281 63.0
Aqoxy1G02942 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 2.5e-87 326.6 250 66.0
SEGI_23048 Sequoiadendron giganteum HOM05D007498 ORTHO05D009384 5.8e-84 315.5 344 46.5
CDE07G0657 Ceratophyllum demersum HOM05D000323 ORTHO05D009384 7.1e-82 308.5 359 49.0
FAN09G2551 Fragaria x ananassa HOM05D007498 ORTHO05D009384 1.6e-81 307.4 315 54.3
ECA234G3795 Erigeron canadensis HOM05D007498 ORTHO05D009384 2.3e-80 303.5 285 57.9
Psat5g106880 Pisum sativum HOM05D007498 ORTHO05D009384 3.0e-80 303.1 280 57.5
Potri.014G157700 Populus trichocarpa HOM05D007498 ORTHO05D009384 4.2e-74 282.7 235 65.5
Ca_16281_v3 Cicer arietinum L. HOM05D007498 ORTHO05D009384 7.2e-74 282.0 396 45.5
FAN14G0249 Fragaria x ananassa HOM05D007498 ORTHO05D001133 2.0e-63 247.3 389 43.4
DCAR_019260 Daucus carota HOM05D007498 ORTHO05D001133 6.7e-56 222.2 170 64.1
AagrBONN_evm.TU.Sc2ySwM_344.4295 Anthoceros agrestis HOM05D007498 ORTHO05D009384 1.2e-52 211.5 325 37.2
MD09G1113200 Malus domestica HOM05D007498 ORTHO05D009384 1.2e-52 211.5 230 52.2
Cpa.g.sc132.15 Carica papaya HOM05D007498 ORTHO05D009384 1.6e-52 211.1 143 72.0
Mapoly0005s0243 Marchantia polymorpha HOM05D007498 ORTHO05D009384 2.0e-47 194.1 354 35.3
Haze_12773 Corylus avellana HOM05D007498 ORTHO05D009384 9.4e-42 175.3 217 52.5
Pp3c17_21590 Physcomitrium patens HOM05D007498 ORTHO05D009384 2.7e-41 173.7 302 35.8
SMO146G0054 Selaginella moellendorffii HOM05D007498 ORTHO05D009384 3.8e-35 153.3 294 34.4
VMungo0540G0169 Vigna mungo HOM05D007498 ORTHO05D009384 8.3e-30 135.6 111 64.0
Atru.chr6.3249 Acer truncatum HOM05D007498 ORTHO05D009384 7.3e-26 122.5 91 64.8
Aqoxy1G02941 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.2e-25 121.7 94 66.0
Atru.chr6.3248 Acer truncatum HOM05D007498 ORTHO05D009384 5.4e-21 106.3 72 76.4
VMungo0540G1885 Vigna mungo HOM05D007498 ORTHO05D009384 9.8e-15 85.5 67 61.2
Cfa025227 Carpinus fangiana HOM05D007498 ORTHO05D009384 1.4e-08 65.1 339 25.1
BcaB06g26853 Brassica carinata HOM05D007498 ORTHO05D009384 5.2e-08 63.2 111 40.5
Cre07.g355550 Chlamydomonas reinhardtii HOM05D024201 ORTHO05D009384 1.5e-07 61.6 316 21.2
Cre02.g079650 Chlamydomonas reinhardtii HOM05D024201 ORTHO05D009384 2.6e-07 60.8 264 22.3


User provided reference genes

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