Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3058 Trochodendron aralioides HOM05D007357 ORTHO05D009314 8.1e-95 350.5 191 100.0
Actinidia14748 Actinidia chinensis HOM05D007357 ORTHO05D009314 2.3e-57 226.1 195 69.7
CSS0024010 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 1.3e-52 210.3 195 65.6
Nn4g25471 Nelumbo nucifera HOM05D007357 ORTHO05D009314 8.7e-49 197.6 192 65.6
Rhsim07G0138300 Rhododendron simsii HOM05D007357 ORTHO05D009314 3.8e-44 182.2 192 60.4
Haze_08047 Corylus avellana HOM05D007357 ORTHO05D009314 2.3e-41 172.9 193 54.4
QL02p024644 Quercus lobata HOM05D007357 ORTHO05D009314 3.7e-39 165.6 196 57.7
Nitab4.5_0001033g0080 Nicotiana tabacum HOM05D007357 ORTHO05D009314 1.8e-38 163.3 206 51.5
Cfa012604 Carpinus fangiana HOM05D007357 ORTHO05D009314 4.1e-38 162.2 220 48.2
CSS0046502 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 6.9e-38 161.4 166 62.0
Migut.A00548 Erythranthe guttata HOM05D007357 ORTHO05D009314 5.9e-37 158.3 214 52.3
PGSC0003DMG400030879 Solanum tuberosum HOM05D007357 ORTHO05D009314 5.9e-37 158.3 202 50.5
CiPaw.11G103400 Carya illinoinensis HOM05D007357 ORTHO05D009314 1.0e-36 157.5 162 58.6
Peaxi162Scf00408g00712 Petunia axillaris HOM05D007357 ORTHO05D009314 1.0e-36 157.5 207 49.3
Sopen08g024580 Solanum pennellii HOM05D007357 ORTHO05D009314 1.0e-36 157.5 202 50.5
PSO063G0202 Papaver somniferum HOM05D007357 ORTHO05D009314 2.9e-36 156.0 210 50.5
ECA246G3443 Erigeron canadensis HOM05D007357 ORTHO05D009314 6.5e-36 154.8 173 55.5
Oeu059314.1 Olea europaea HOM05D007357 ORTHO05D009314 2.5e-35 152.9 235 47.2
COL.COLO4_16848 Corchorus olitorius HOM05D007357 ORTHO05D009314 7.2e-35 151.4 179 55.3
Cc08_g05250 Coffea canephora HOM05D007357 ORTHO05D009314 9.4e-35 151.0 209 49.8
Aqoxy5G03983 Aquilegia oxysepala HOM05D007357 ORTHO05D009314 1.2e-34 150.6 180 51.7
Sed0001819 Sechium edule HOM05D007357 ORTHO05D009314 1.2e-34 150.6 191 50.8
VMungo1215G1709 Vigna mungo HOM05D007357 ORTHO05D009314 1.2e-34 150.6 183 52.5
HanXRQChr17g0539311 Helianthus annuus HOM05D007357 ORTHO05D009314 2.1e-34 149.8 203 46.8
Prupe.5G019800 Prunus persica HOM05D007357 ORTHO05D009314 2.1e-34 149.8 191 49.7
CsaV3_3G030320 Cucumis sativus L. HOM05D007357 ORTHO05D009314 2.7e-34 149.4 196 50.0
Lsat_1_v5_gn_3_28060 Lactuca sativa HOM05D007357 ORTHO05D009314 4.6e-34 148.7 198 48.5
ClCG07G002370 Citrullus lanatus HOM05D007357 ORTHO05D009314 7.9e-34 147.9 196 49.5
Manes.17G008100 Manihot esculenta HOM05D007357 ORTHO05D009314 1.8e-33 146.7 192 52.6
CAN.G1269.3 Capsicum annuum HOM05D007357 ORTHO05D009314 2.3e-33 146.4 168 53.6
Gohir.A12G203400 Gossypium hirsutum HOM05D007357 ORTHO05D009314 5.1e-33 145.2 178 51.7
Gohir.D12G206000 Gossypium hirsutum HOM05D007357 ORTHO05D009314 1.1e-32 144.1 178 51.7
CDE12G0114 Ceratophyllum demersum HOM05D007357 ORTHO05D009314 2.0e-32 143.3 188 47.3
Gorai.008G220900 Gossypium raimondii HOM05D007357 ORTHO05D009314 2.0e-32 143.3 178 51.7
TWI34G1682 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 2.0e-32 143.3 194 49.5
Ah.07g201200 Amaranthus hybridus HOM05D007357 ORTHO05D009314 3.3e-32 142.5 204 49.0
Phvul.002G128100 Phaseolus vulgaris HOM05D007357 ORTHO05D009314 3.3e-32 142.5 182 50.5
Sc07g0008390 Simmondsia chinensis HOM05D007357 ORTHO05D009314 4.4e-32 142.1 178 48.3
TWI34G1422 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 4.4e-32 142.1 194 49.5
arahy.Tifrunner.gnm1.ann1.0Q5JCD Arachis hypogaea HOM05D007357 ORTHO05D009314 9.7e-32 141.0 191 49.2
arahy.Tifrunner.gnm1.ann1.JPN6B0 Arachis hypogaea HOM05D007357 ORTHO05D009314 9.7e-32 141.0 191 49.2
FvH4_5g24040 Fragaria vesca HOM05D007357 ORTHO05D009314 1.3e-31 140.6 121 62.0
FAN18G2492 Fragaria x ananassa HOM05D007357 ORTHO05D009314 1.3e-31 140.6 121 62.0
FAN18G4511 Fragaria x ananassa HOM05D007357 ORTHO05D009314 1.3e-31 140.6 121 62.0
MD06G1015900 Malus domestica HOM05D007357 ORTHO05D009314 2.8e-31 139.4 127 59.8
HPP92_025510 Vanilla planifolia HOM05D007357 ORTHO05D009314 3.7e-31 139.0 191 46.6
HPP92_025525 Vanilla planifolia HOM05D007357 ORTHO05D009314 3.7e-31 139.0 191 47.1
RcHm_v2.0_Chr7g0213521 Rosa chinensis HOM05D007357 ORTHO05D009314 4.8e-31 138.7 151 52.3
Sed0016962 Sechium edule HOM05D007357 ORTHO05D009314 4.8e-31 138.7 194 47.9
Potri.001G132232 Populus trichocarpa HOM05D007357 ORTHO05D009314 8.2e-31 137.9 124 59.7
FAN08G0560 Fragaria x ananassa HOM05D007357 ORTHO05D009314 1.4e-30 137.1 121 60.3
unitig_32.g10966 Utricularia gibba HOM05D007357 ORTHO05D009314 4.1e-30 135.6 209 45.5
CANSAT21G2249 Cannabis sativa HOM05D007357 ORTHO05D009314 5.3e-30 135.2 188 50.5
vmacro13970 Vaccinium macrocarpon HOM05D007357 ORTHO05D009314 6.9e-30 134.8 222 46.8
ATR0829G081 Amborella trichopoda HOM05D007357 ORTHO05D009314 1.2e-29 134.0 199 42.2
FvH4_3g08760 Fragaria vesca HOM05D007357 ORTHO05D009314 1.5e-29 133.7 121 58.7
Glyma.01G150100 Glycine max HOM05D007357 ORTHO05D009314 3.4e-29 132.5 184 48.4
AUR62007392 Chenopodium quinoa HOM05D007357 ORTHO05D009314 1.0e-28 131.0 158 50.6
Oeu042216.1 Olea europaea HOM05D007357 ORTHO05D009314 1.0e-28 131.0 221 46.2
AUR62027337 Chenopodium quinoa HOM05D007357 ORTHO05D009314 2.9e-28 129.4 124 54.8
AUR62044266 Chenopodium quinoa HOM05D007357 ORTHO05D009314 2.9e-28 129.4 190 45.3
MELO3C022754.2 Cucumis melo HOM05D007357 ORTHO05D009314 2.9e-28 129.4 196 44.9
Hma1.2p1_1179F.1_g264570 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 2.9e-28 129.4 173 51.4
DCAR_008186 Daucus carota HOM05D007357 ORTHO05D009314 5.0e-28 128.6 201 43.3
Cpa.g.sc223.2 Carica papaya HOM05D007357 ORTHO05D009314 5.5e-27 125.2 194 46.4
Solyc08g075930.4 Solanum lycopersicum HOM05D007357 ORTHO05D009314 3.6e-26 122.5 172 49.4
Os07g0452600 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 4.7e-26 122.1 120 52.5
Lj2g0006468 Lotus japonicus HOM05D007357 ORTHO05D009314 1.8e-25 120.2 193 46.1
Duzib068G0657 Durio zibethinus HOM05D007357 ORTHO05D009314 5.2e-25 118.6 147 53.1
SGA_v2.0_scaffold89G27413 Striga asiatica HOM05D003343 ORTHO05D003787 5.2e-25 118.6 169 52.7
Medtr5g026790 Medicago truncatula HOM05D007357 ORTHO05D009314 6.7e-25 118.2 192 44.3
ECA240G0146 Erigeron canadensis HOM05D007357 ORTHO05D009314 2.0e-24 116.7 196 41.3
Eucgr.D02601 Eucalyptus grandis HOM05D007357 ORTHO05D009314 5.7e-24 115.2 197 42.1
Ciclev10002529m.g Citrus clementina HOM05D007357 ORTHO05D009314 9.7e-24 114.4 212 40.1
PSO782G0982 Papaver somniferum HOM05D007357 ORTHO05D009314 6.3e-23 111.7 180 46.1
Zm00001eb096560 Zea mays HOM05D007357 ORTHO05D009314 4.1e-22 109.0 186 40.9
Psat2g142360 Pisum sativum HOM05D007357 ORTHO05D009314 7.0e-22 108.2 192 40.6
Glyma.09G214200 Glycine max HOM05D007357 ORTHO05D009314 1.2e-21 107.5 184 42.9
Haze_08057 Corylus avellana HOM05D007357 ORTHO05D009314 2.0e-21 106.7 191 42.4
Lalb_Chr05g0215411 Lupinus albus HOM05D007357 ORTHO05D009314 2.0e-21 106.7 189 42.3
Nitab4.5_0001786g0050 Nicotiana tabacum HOM05D007357 ORTHO05D009314 3.5e-21 105.9 206 41.7
Thecc.03G316500 Theobroma cacao HOM05D007357 ORTHO05D009314 1.0e-20 104.4 132 53.0
TWI79G1144 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 3.8e-20 102.4 149 49.7
EL10Ac5g11952 Beta vulgaris HOM05D000153 ORTHO05D000118 5.5e-19 98.6 190 39.5
Hund11140 Selenicereus undatus HOM05D007357 ORTHO05D009314 9.4e-19 97.8 125 48.0
TPR.G17258 Trifolium pratense HOM05D007357 ORTHO05D009314 4.7e-18 95.5 189 37.6
MD06G1016600 Malus domestica HOM05D007357 ORTHO05D009314 2.3e-17 93.2 162 40.7
FAN11G2380 Fragaria x ananassa HOM05D007357 ORTHO05D009314 5.2e-17 92.0 108 50.9
Sabra01G0102000 Salix brachista HOM05D007357 ORTHO05D009314 2.0e-16 90.1 76 55.3
arahy.Tifrunner.gnm1.ann1.L1IIZH Arachis hypogaea HOM05D007357 ORTHO05D009314 8.2e-15 84.7 119 46.2
CSS0020054 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 9.1e-14 81.3 58 74.1
Os08g0180400 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 2.0e-13 80.1 74 51.4
CSS0037866 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 3.5e-13 79.3 58 72.4
Zm00001eb171770 Zea mays HOM05D007357 ORTHO05D009314 1.7e-12 77.0 136 36.0
Ca_25098_v3 Cicer arietinum L. HOM05D007357 ORTHO05D009314 3.2e-11 72.8 164 39.0
MD06G1016300 Malus domestica HOM05D007357 ORTHO05D009314 1.2e-10 70.9 57 64.9
arahy.Tifrunner.gnm1.ann1.F5EPY8 Arachis hypogaea HOM05D007357 ORTHO05D009314 6.8e-09 65.1 95 48.4
AagrBONN_evm.TU.Sc2ySwM_228.1692 Anthoceros agrestis HOM05D007357 ORTHO05D009314 8.8e-09 64.7 135 29.6
Hma1.2p1_0784F.1_g217055 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 3.4e-08 62.8 49 65.3
Hma1.2p1_0944F.1_g240000 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 3.4e-08 62.8 49 65.3
Nitab4.5_0018136g0010 Nicotiana tabacum HOM05D007357 ORTHO05D009314 3.4e-08 62.8 100 43.0
Oeu059300.1 Olea europaea HOM05D007357 ORTHO05D009314 4.8e-07 58.9 63 55.6


User provided reference genes

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