Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 1.1e-91 340.1 186 100.0
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 5.0e-57 224.9 177 74.0
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.3e-52 210.3 181 69.1
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 9.1e-51 204.1 184 66.8
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 1.5e-50 203.4 177 69.5
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 2.9e-49 199.1 177 67.8
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 8.5e-49 197.6 177 68.4
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 8.5e-49 197.6 175 66.9
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 2.5e-48 196.1 175 68.0
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 2.1e-47 193.0 174 67.8
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 2.6e-45 186.0 176 61.9
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 9.7e-45 184.1 173 64.7
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 1.1e-43 180.6 177 64.4
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 2.4e-43 179.5 177 63.8
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 7.0e-43 177.9 175 61.7
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 1.6e-42 176.8 166 65.1
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 1.3e-41 173.7 172 64.5
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 3.8e-41 172.2 173 60.1
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 5.0e-41 171.8 176 61.9
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 1.9e-40 169.9 178 61.8
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 1.6e-39 166.8 177 63.3
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 6.1e-39 164.9 153 63.4
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 1.0e-38 164.1 179 58.1
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 1.4e-38 163.7 177 53.7
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 1.5e-37 160.2 178 58.4
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 1.5e-37 160.2 177 58.8
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 2.6e-37 159.5 177 58.8
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 4.4e-37 158.7 174 55.7
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 5.7e-37 158.3 179 53.6
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 3.7e-36 155.6 135 69.6
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 3.7e-36 155.6 174 57.5
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 6.3e-36 154.8 172 59.9
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.1e-35 154.1 166 59.0
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 5.3e-35 151.8 148 65.5
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 7.0e-35 151.4 177 57.6
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 7.0e-35 151.4 173 59.5
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 7.0e-35 151.4 175 56.6
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 7.0e-35 151.4 175 56.6
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 7.0e-35 151.4 175 56.6
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 2.7e-34 149.4 176 54.5
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 3.5e-34 149.1 172 56.4
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 4.5e-34 148.7 174 55.7
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 5.9e-34 148.3 177 57.6
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 1.3e-33 147.1 180 52.8
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 2.9e-33 146.0 133 68.4
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 5.0e-33 145.2 145 63.4
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 1.1e-32 144.1 175 56.0
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 3.2e-32 142.5 144 63.9
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 3.2e-32 142.5 173 54.9
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 7.2e-32 141.4 173 52.6
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 9.4e-32 141.0 145 62.8
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 9.4e-32 141.0 175 53.7
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 9.4e-32 141.0 173 52.6
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 9.4e-32 141.0 179 55.3
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 2.1e-31 139.8 155 61.3
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 3.6e-31 139.0 173 56.6
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 6.1e-31 138.3 177 54.8
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 8.0e-31 137.9 177 54.8
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 1.0e-30 137.5 144 61.1
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 1.4e-30 137.1 146 61.0
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.8e-30 136.7 177 54.8
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 2.3e-30 136.3 139 62.6
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 4.0e-30 135.6 177 53.1
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 4.0e-30 135.6 135 63.7
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 5.2e-30 135.2 177 53.1
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 6.8e-30 134.8 139 61.9
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 6.8e-30 134.8 140 62.1
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 6.8e-30 134.8 139 62.6
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 1.5e-29 133.7 177 52.5
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 2.0e-29 133.3 151 57.6
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 2.6e-29 132.9 136 63.2
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 2.6e-29 132.9 151 57.6
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 2.6e-29 132.9 173 52.6
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 4.4e-29 132.1 146 61.0
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 5.7e-29 131.7 151 57.0
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 7.5e-29 131.3 142 59.9
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 7.5e-29 131.3 151 58.3
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 1.3e-28 130.6 173 50.3
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 2.8e-28 129.4 162 48.8
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 2.8e-28 129.4 151 58.3
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 2.8e-28 129.4 174 50.6
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 8.3e-28 127.9 160 52.5
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 8.3e-28 127.9 160 53.1
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 7.0e-27 124.8 116 71.6
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 4.5e-26 122.1 169 50.9
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 1.9e-24 116.7 168 51.2
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 3.3e-24 115.9 166 48.8
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 4.2e-24 115.5 161 48.4
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 3.6e-23 112.5 166 48.8
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 4.7e-23 112.1 99 72.7
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 2.0e-21 106.7 100 73.0
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 2.8e-20 102.8 177 47.5
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 2.4e-19 99.8 127 47.2
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 4.1e-19 99.0 93 72.0
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 9.2e-19 97.8 85 77.6
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.2e-18 97.4 81 77.8
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 3.5e-18 95.9 103 67.0
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 4.5e-18 95.5 121 52.1
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 5.6e-16 88.6 179 41.9
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 9.5e-16 87.8 139 46.0
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 1.4e-14 84.0 122 47.5
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 9.8e-13 77.8 82 67.1
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 2.2e-12 76.6 82 64.6
CDE02G3979 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 6.0e-10 68.6 119 37.0
AUR62044264 Chenopodium quinoa HOM05D007523 ORTHO05D009520 1.4e-06 57.4 157 40.8


User provided reference genes

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