Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3002 Trochodendron aralioides HOM05D005239 ORTHO05D006698 6.2e-258 893.6 464 100.0
TAR636G2805 Trochodendron aralioides HOM05D005239 ORTHO05D006698 6.1e-213 744.2 460 85.9
Nn6g33642 Nelumbo nucifera HOM05D005239 ORTHO05D006698 2.2e-194 682.6 462 77.1
Dinv43567 Davidia involucrata HOM05D005239 ORTHO05D006698 1.3e-178 630.2 407 78.9
Aqoxy3G02472 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 3.2e-177 625.5 461 73.5
CSS0007844 Camellia sinensis var. sinensis HOM05D005239 ORTHO05D006698 1.5e-174 616.7 464 70.7
Dinv44000 Davidia involucrata HOM05D005239 ORTHO05D001060 3.4e-171 605.5 387 80.6
Hma1.2p1_0601F.1_g187220 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 4.1e-169 598.6 468 68.6
vmacro21097 Vaccinium macrocarpon HOM05D005239 ORTHO05D006698 2.2e-162 576.2 459 69.1
Cfa011001 Carpinus fangiana HOM05D002067 ORTHO05D001060 5.4e-161 571.6 434 69.1
PSO170G2576 Papaver somniferum HOM05D005239 ORTHO05D006698 5.4e-161 571.6 467 67.0
Rhsim01G0145300 Rhododendron simsii HOM05D005239 ORTHO05D006698 2.1e-160 569.7 496 63.9
CiPaw.13G020400 Carya illinoinensis HOM05D005239 ORTHO05D006698 3.5e-160 568.9 466 68.9
Actinidia21601 Actinidia chinensis HOM05D005239 ORTHO05D006698 3.0e-159 565.8 463 67.0
CsaV3_3G010220 Cucumis sativus L. HOM05D005239 ORTHO05D006698 5.1e-159 565.1 423 69.3
MELO3C006242.2 Cucumis melo HOM05D005239 ORTHO05D006698 1.9e-158 563.1 467 65.3
PSO302G0170 Papaver somniferum HOM05D005239 ORTHO05D006698 3.3e-158 562.4 472 65.9
TWI59G0212 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 4.7e-157 558.5 473 65.5
MD08G1235300 Malus domestica HOM05D005239 ORTHO05D006698 1.4e-156 557.0 466 66.3
Prupe.1G571600 Prunus persica HOM05D005239 ORTHO05D006698 4.0e-156 555.4 445 67.4
ATR1153G024 Amborella trichopoda HOM05D005239 ORTHO05D006698 6.8e-156 554.7 448 67.0
Gorai.006G218900 Gossypium raimondii HOM05D005239 ORTHO05D006698 6.8e-156 554.7 461 65.7
PGR119G0794 Punica granatum HOM05D005239 ORTHO05D006698 6.8e-156 554.7 419 69.7
Duzib151G1142 Durio zibethinus HOM05D005239 ORTHO05D006698 1.2e-155 553.9 451 65.6
RcHm_v2.0_Chr6g0273481 Rosa chinensis HOM05D005239 ORTHO05D006698 1.2e-155 553.9 458 65.9
Atru.chr9.1540 Acer truncatum HOM05D005239 ORTHO05D006698 4.4e-155 552.0 436 67.9
TWI14G1099 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 7.6e-155 551.2 470 65.3
Gohir.D09G195500 Gossypium hirsutum HOM05D005239 ORTHO05D006698 9.9e-155 550.8 461 65.5
Sed0027364 Sechium edule HOM05D005239 ORTHO05D006698 3.7e-154 548.9 452 65.3
Gohir.A09G201600 Gossypium hirsutum HOM05D005239 ORTHO05D006698 6.4e-154 548.1 461 65.9
Potri.002G216100 Populus trichocarpa HOM05D005239 ORTHO05D006698 1.1e-153 547.4 450 67.8
Ah.06g191320 Amaranthus hybridus HOM05D005239 ORTHO05D006698 1.4e-153 547.0 467 66.4
Nitab4.5_0004264g0020 Nicotiana tabacum HOM05D005239 ORTHO05D006698 1.9e-153 546.6 433 66.3
Sed0010493 Sechium edule HOM05D005239 ORTHO05D006698 1.9e-153 546.6 446 65.9
GSVIVG01018386001 Vitis vinifera HOM05D005239 ORTHO05D006698 2.4e-153 546.2 460 66.1
FvH4_2g12720 Fragaria vesca HOM05D005239 ORTHO05D006698 9.2e-153 544.3 411 69.1
CDE04G1215 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 1.2e-152 543.9 467 62.5
Ciclev10020370m.g Citrus clementina HOM05D005239 ORTHO05D006698 1.2e-152 543.9 420 69.3
Thecc.04G216000 Theobroma cacao HOM05D005239 ORTHO05D006698 4.6e-152 542.0 456 66.0
Sabra02G0168400 Salix brachista HOM05D005239 ORTHO05D006698 7.8e-152 541.2 447 65.1
DCAR_029633 Daucus carota HOM05D005239 ORTHO05D006698 1.3e-151 540.4 416 67.8
Manes.05G061000 Manihot esculenta HOM05D005239 ORTHO05D006698 1.1e-150 537.3 433 68.1
FAN27G2303 Fragaria x ananassa HOM05D005239 ORTHO05D006698 1.5e-150 537.0 471 62.8
Solyc01g080860.3 Solanum lycopersicum HOM05D005239 ORTHO05D006698 1.9e-150 536.6 464 63.1
Sopen01g032450 Solanum pennellii HOM05D005239 ORTHO05D006698 1.9e-150 536.6 464 63.1
Sc20g0003020 Simmondsia chinensis HOM05D005239 ORTHO05D006698 4.3e-150 535.4 395 71.9
FAN15G3107 Fragaria x ananassa HOM05D005239 ORTHO05D006698 7.3e-150 534.6 471 62.6
Peaxi162Scf01144g00013 Petunia axillaris HOM05D005239 ORTHO05D006698 9.6e-150 534.3 436 66.3
Haze_02934 Corylus avellana HOM05D005239 ORTHO05D006698 2.8e-149 532.7 463 62.9
QL04p024849 Quercus lobata HOM05D005239 ORTHO05D006698 2.8e-149 532.7 399 70.7
CANSAT54G1536 Cannabis sativa HOM05D005239 ORTHO05D006698 6.2e-149 531.6 443 66.4
COL.COLO4_20862 Corchorus olitorius HOM05D005239 ORTHO05D006698 6.2e-149 531.6 466 62.2
Glyma.20G243400 Glycine max HOM05D005239 ORTHO05D006698 1.4e-148 530.4 371 74.4
ClCG05G002730 Citrullus lanatus HOM05D005239 ORTHO05D006698 5.2e-148 528.5 465 62.6
CAN.G1480.7 Capsicum annuum HOM05D005239 ORTHO05D006698 2.6e-147 526.2 397 69.5
AUR62041654 Chenopodium quinoa HOM05D005239 ORTHO05D006698 2.6e-147 526.2 464 63.6
Cc02_g25930 Coffea canephora HOM05D005239 ORTHO05D006698 4.4e-147 525.4 464 64.0
PGSC0003DMG400001672 Solanum tuberosum HOM05D005239 ORTHO05D006698 4.4e-147 525.4 470 61.5
Eucgr.H02846 Eucalyptus grandis HOM05D005239 ORTHO05D006698 8.4e-146 521.2 471 61.8
AUR62035533 Chenopodium quinoa HOM05D005239 ORTHO05D006698 1.4e-145 520.4 463 63.5
ECA234G1231 Erigeron canadensis HOM05D005239 ORTHO05D006698 5.4e-145 518.5 407 66.8
VMungo0720G0476 Vigna mungo HOM05D005239 ORTHO05D006698 2.1e-144 516.5 409 69.9
Phvul.007G006700 Phaseolus vulgaris HOM05D005239 ORTHO05D006698 1.0e-143 514.2 381 72.2
SGA_v2.0_scaffold69G23296 Striga asiatica HOM05D005239 ORTHO05D006698 1.0e-143 514.2 458 62.0
THA.LOC104817164 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 1.0e-143 514.2 457 61.9
Oeu002884.1 Olea europaea HOM05D005239 ORTHO05D006698 3.0e-143 512.7 475 60.8
THA.LOC104802511 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 1.5e-142 510.4 460 61.3
Lj9A547G68 Lonicera japonica HOM05D005239 ORTHO05D006698 1.9e-142 510.0 337 76.9
arahy.Tifrunner.gnm1.ann1.X9CQTL Arachis hypogaea HOM05D005239 ORTHO05D006698 7.3e-142 508.1 376 70.2
SGA_v2.0_scaffold52G19274 Striga asiatica HOM05D005239 ORTHO05D006698 2.8e-141 506.1 458 60.9
arahy.Tifrunner.gnm1.ann1.XN1C7B Arachis hypogaea HOM05D005239 ORTHO05D006698 4.8e-141 505.4 381 68.8
Lj5g0010357 Lotus japonicus HOM05D005239 ORTHO05D006698 8.1e-141 504.6 418 65.8
HPP92_001886 Vanilla planifolia HOM05D005239 ORTHO05D006698 1.4e-140 503.8 424 65.6
EL10Ac4g08842 Beta vulgaris HOM05D005239 ORTHO05D006698 1.8e-140 503.4 447 62.9
Medtr1g116110 Medicago truncatula HOM05D005239 ORTHO05D006698 3.1e-140 502.7 370 70.5
HanXRQChr17g0562471 Helianthus annuus HOM05D005239 ORTHO05D006698 2.0e-139 500.0 410 64.1
Aa31LG1G26110 Aethionema arabicum HOM05D005239 ORTHO05D006698 1.3e-138 497.3 393 65.6
Ca_11344_v3 Cicer arietinum L. HOM05D005239 ORTHO05D006698 1.7e-138 496.9 378 68.8
TPR.G10426 Trifolium pratense HOM05D005239 ORTHO05D006698 9.3e-137 491.1 365 69.6
Os01g0527700 Oryza sativa ssp. japonica HOM05D005239 ORTHO05D006698 1.3e-135 487.3 360 69.7
Lalb_Chr02g0143811 Lupinus albus HOM05D005239 ORTHO05D006698 2.3e-135 486.5 365 68.8
Zm00001eb402310 Zea mays HOM05D005239 ORTHO05D006698 1.1e-134 484.2 361 69.8
Thhalv10001456m.g Eutrema salsugineum HOM05D005239 ORTHO05D006698 1.3e-133 480.7 402 63.2
Psat6g232360 Pisum sativum HOM05D005239 ORTHO05D006698 1.3e-133 480.7 366 68.3
Carub.0004s2708 Capsella rubella HOM05D005239 ORTHO05D006698 1.8e-132 476.9 407 62.9
BcaB06g29384 Brassica carinata HOM05D005239 ORTHO05D006698 5.3e-132 475.3 374 64.7
AT2G44520 Arabidopsis thaliana HOM05D005239 ORTHO05D006698 6.9e-132 474.9 408 62.5
AL4G43540 Arabidopsis lyrata HOM05D005239 ORTHO05D006698 1.5e-131 473.8 466 57.5
BcaC02g07098 Brassica carinata HOM05D005239 ORTHO05D006698 7.6e-131 471.5 381 64.3
Sp4g26610 Schrenkiella parvula HOM05D005239 ORTHO05D006698 1.7e-130 470.3 404 61.9
BolC4t28610H Brassica oleracea HOM05D005239 ORTHO05D006698 2.9e-130 469.5 381 64.0
unitig_26.g9718 Utricularia gibba HOM05D005239 ORTHO05D006698 6.4e-130 468.4 441 57.6
BraA04t18797Z Brassica rapa HOM05D005239 ORTHO05D006698 1.4e-129 467.2 379 64.6
Nitab4.5_0001476g0120 Nicotiana tabacum HOM05D005239 ORTHO05D006698 2.1e-128 463.4 434 59.9
Duzib212G0896 Durio zibethinus HOM05D005239 ORTHO05D006698 1.1e-126 457.6 464 58.4
Lsat_1_v5_gn_4_39040 Lactuca sativa HOM05D005239 ORTHO05D006698 1.3e-125 454.1 403 61.5
Zm00001eb005400 Zea mays HOM05D005239 ORTHO05D006698 5.3e-124 448.7 338 68.6
C04p05410 Brassica napus HOM05D005239 ORTHO05D006698 2.0e-123 446.8 354 66.4
BolC4t22181H Brassica oleracea HOM05D005239 ORTHO05D006698 2.0e-123 446.8 354 66.4
C04p71050 Brassica napus HOM05D000073 ORTHO05D006698 2.7e-120 436.4 345 65.5
BcaNung07053 Brassica carinata HOM05D005239 ORTHO05D006698 1.3e-119 434.1 374 61.5
MD15G1426600 Malus domestica HOM05D005239 ORTHO05D006698 3.9e-119 432.6 310 72.3
A04p33360 Brassica napus HOM05D000073 ORTHO05D006698 5.1e-119 432.2 340 66.2
Actinidia33289 Actinidia chinensis HOM05D005239 ORTHO05D006698 3.1e-116 422.9 336 68.5
BcaC02g12301 Brassica carinata HOM05D005239 ORTHO05D006698 5.3e-116 422.2 347 64.3
SEGI_24425 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 2.3e-111 406.8 272 71.7
AagrBONN_evm.TU.Sc2ySwM_369.187 Anthoceros agrestis HOM05D005239 ORTHO05D006698 1.5e-110 404.1 362 58.0
Cpa.g.sc20.28 Carica papaya HOM05D005239 ORTHO05D006698 3.1e-108 396.4 344 64.0
Hma1.2p1_0601F.1_g187230 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 6.9e-108 395.2 306 69.6
Migut.B01467 Erythranthe guttata HOM05D005239 ORTHO05D006698 2.0e-107 393.7 328 64.9
Mapoly0029s0153 Marchantia polymorpha HOM05D005239 ORTHO05D006698 3.1e-100 369.8 371 53.4
SMO364G0841 Selaginella moellendorffii HOM05D005239 ORTHO05D006698 5.9e-99 365.5 351 54.1
CDE12G0888 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 2.2e-90 337.0 253 68.4
PSO357G0304 Papaver somniferum HOM05D005239 ORTHO05D006698 1.6e-88 330.9 201 81.6
CBR_g3821 Chara braunii HOM05D005239 ORTHO05D006698 6.1e-88 328.9 429 44.5
CAN.G74.42 Capsicum annuum HOM05D005239 ORTHO05D006698 3.0e-87 326.6 316 57.3
CARHR139710 Cardamine hirsuta HOM05D005239 ORTHO05D006698 6.7e-87 325.5 251 66.1
Pp3c14_19200 Physcomitrium patens HOM05D005239 ORTHO05D006698 1.2e-83 314.7 261 60.5
Oeu037395.1 Olea europaea HOM05D005239 ORTHO05D006698 6.3e-77 292.4 346 53.2
Cre12.g516350 Chlamydomonas reinhardtii HOM05D005239 ORTHO05D006698 5.7e-70 269.2 278 52.5
Aqoxy5G02001 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 6.3e-69 265.8 174 77.0
PRCOL_00000009 Prasinoderma coloniale HOM05D005239 ORTHO05D006698 8.3e-69 265.4 348 45.4
MCO03G363 Micromonas commoda HOM05D005239 ORTHO05D006698 1.3e-66 258.1 283 51.2
BraA05t19443Z Brassica rapa HOM05D005239 ORTHO05D006698 3.8e-66 256.5 294 51.7
MD15G1426900 Malus domestica HOM05D005239 ORTHO05D006698 5.6e-65 252.7 193 66.3
A05p04670 Brassica napus HOM05D005239 ORTHO05D006698 2.1e-64 250.8 294 51.4
BcaB02g08828 Brassica carinata HOM05D005239 ORTHO05D006698 1.5e-49 201.4 246 50.4
SHI13675 Sapria himalayana HOM05D005239 ORTHO05D006698 1.2e-48 198.4 205 54.6
FAN24G3432 Fragaria x ananassa HOM05D005239 ORTHO05D006698 8.9e-47 192.2 165 63.0
Cfa027222 Carpinus fangiana HOM05D005239 ORTHO05D006698 3.2e-36 157.1 326 35.9
PGR004G1759 Punica granatum HOM05D005239 ORTHO05D006698 4.7e-32 143.3 121 62.8
PSO081G0040 Papaver somniferum HOM05D005239 ORTHO05D006698 1.5e-30 138.3 83 81.9
Glyma.10G293300 Glycine max HOM05D005239 ORTHO05D006698 6.0e-27 126.3 76 76.3
TPR.G37315 Trifolium pratense HOM05D005239 ORTHO05D006698 1.0e-26 125.6 83 73.5
RcHm_v2.0_Chr6g0271171 Rosa chinensis HOM05D005239 ORTHO05D006698 1.1e-23 115.5 71 80.3
RcHm_v2.0_Chr7g0200821 Rosa chinensis HOM05D005239 ORTHO05D006698 1.7e-21 108.2 71 76.1
CDE12G0056 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 2.9e-21 107.5 92 62.0
Cc02_g25970 Coffea canephora HOM05D005239 ORTHO05D006698 2.0e-14 84.7 99 48.5
SEGI_27712 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 6.4e-13 79.7 57 71.9
SHI13676 Sapria himalayana HOM05D005239 ORTHO05D006698 7.4e-09 66.2 59 62.7
MSTRG.17096 Avicennia marina HOM05D005239 ORTHO05D006698 9.0e-07 59.3 34 85.3


User provided reference genes

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