Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2975 Trochodendron aralioides HOM05D018497 ORTHO05D021348 2.0e-89 332.8 219 100.0
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 5.2e-29 132.1 213 53.1
TAR626G0423 Trochodendron aralioides HOM05D018497 ORTHO05D021348 2.5e-23 113.2 239 37.7
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 2.8e-14 83.2 272 39.3
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 2.3e-13 80.1 168 35.7
Aqoxy193s002 Aquilegia oxysepala HOM05D018497 ORTHO05D021348 4.4e-12 75.9 300 31.7
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 1.7e-11 73.9 117 47.9
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 4.9e-11 72.4 279 36.2
Prupe.4G052000 Prunus persica HOM05D007160 ORTHO05D005331 1.1e-10 71.2 99 48.5
Aqoxy1G02278 Aquilegia oxysepala HOM05D018497 ORTHO05D021348 4.1e-10 69.3 174 31.6
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 4.1e-10 69.3 262 30.9
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 4.1e-10 69.3 149 35.6
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 7.0e-10 68.6 309 36.2
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 2.0e-09 67.0 161 37.3
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 1.0e-08 64.7 136 41.9
Lalb_Chr09g0327841 Lupinus albus HOM05D007160 ORTHO05D005331 1.0e-08 64.7 134 38.8
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 1.7e-08 63.9 159 37.7
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 2.9e-08 63.2 119 41.2
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 2.9e-08 63.2 86 43.0
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 2.9e-08 63.2 260 33.8
CSS0024231 Camellia sinensis var. sinensis HOM05D007160 ORTHO05D005331 5.0e-08 62.4 90 44.4
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 5.0e-08 62.4 170 34.7
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 5.0e-08 62.4 82 43.9
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 8.6e-08 61.6 144 32.6
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.5e-07 60.8 161 35.4
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 1.9e-07 60.5 148 35.8
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 2.5e-07 60.1 167 38.3
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 2.5e-07 60.1 167 38.3
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 3.3e-07 59.7 249 29.3
Aqoxy4G00632 Aquilegia oxysepala HOM05D018497 ORTHO05D021348 4.3e-07 59.3 149 40.3
CAN.G529.50 Capsicum annuum HOM05D007160 ORTHO05D005331 4.3e-07 59.3 78 46.2
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 4.3e-07 59.3 111 38.7
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.3e-07 59.3 121 42.1
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 4.3e-07 59.3 137 31.4
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 5.6e-07 58.9 149 34.2
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 5.6e-07 58.9 122 37.7
Thecc.06G181500 Theobroma cacao HOM05D007160 ORTHO05D005331 5.6e-07 58.9 181 54.7
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 7.3e-07 58.5 148 35.8
Nn1g04227 Nelumbo nucifera HOM05D018497 ORTHO05D021348 7.3e-07 58.5 73 49.3
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 7.3e-07 58.5 154 36.4
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 1.2e-06 57.8 76 43.4
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 1.2e-06 57.8 282 41.5
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 1.2e-06 57.8 282 41.5
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 1.6e-06 57.4 250 32.4
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.6e-06 57.4 122 40.2
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 1.6e-06 57.4 172 30.8
MD10G1289700 Malus domestica HOM05D007160 ORTHO05D005331 2.1e-06 57.0 282 38.3
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.1e-06 57.0 121 38.8
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 2.1e-06 57.0 82 42.7
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.8e-06 56.6 121 39.7
Nitab4.5_0004359g0050 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.8e-06 56.6 117 40.2
Peaxi162Scf00926g00031 Petunia axillaris HOM05D007160 ORTHO05D005331 3.6e-06 56.2 69 47.8
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 4.7e-06 55.8 114 35.1
Nitab4.5_0001955g0170 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.7e-06 55.8 98 40.8


User provided reference genes

Program Settings