Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 0.0e+00 1240.3 632 100.0
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 1.8e-244 849.4 634 71.8
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 1.8e-236 822.8 659 67.4
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 2.9e-234 815.5 643 67.5
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 8.0e-232 807.4 644 66.3
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 3.1e-228 795.4 585 69.7
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 1.7e-221 773.1 647 62.8
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 1.2e-216 756.9 647 62.0
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 2.1e-216 756.1 650 63.7
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 2.1e-216 756.1 644 63.0
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 3.0e-215 752.3 644 63.0
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 5.2e-215 751.5 657 63.2
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 2.0e-214 749.6 642 63.6
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 9.2e-212 740.7 623 65.3
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 2.0e-211 739.6 638 62.4
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 2.0e-211 739.6 643 63.3
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 2.9e-210 735.7 636 63.4
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 2.5e-209 732.6 643 61.9
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 2.1e-208 729.6 640 62.0
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 8.0e-208 727.6 677 58.5
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 1.4e-207 726.9 652 62.0
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 2.6e-206 722.6 640 62.2
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 8.3e-205 717.6 643 61.7
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 3.2e-204 715.7 639 60.9
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 5.4e-204 714.9 639 61.0
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 4.6e-203 711.8 629 63.0
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 1.7e-202 709.9 649 60.1
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 3.9e-202 708.8 640 60.9
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 8.6e-202 707.6 639 60.6
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 1.9e-201 706.4 649 59.9
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 4.3e-201 705.3 645 60.6
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 3.6e-200 702.2 646 58.7
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 4.0e-199 698.7 633 59.6
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 1.3e-197 693.7 664 57.2
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 1.3e-197 693.7 667 57.4
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 6.4e-197 691.4 644 58.4
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 8.3e-197 691.0 642 59.2
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 8.3e-197 691.0 656 57.3
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 1.1e-196 690.6 615 60.0
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 4.1e-196 688.7 643 60.7
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 9.2e-196 687.6 632 61.1
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 2.3e-194 682.9 639 59.6
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 3.0e-194 682.6 642 59.7
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 1.5e-193 680.2 660 56.8
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 3.3e-193 679.1 643 58.0
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 5.6e-193 678.3 642 58.9
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 2.1e-192 676.4 636 59.7
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 4.7e-192 675.2 643 59.7
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 1.4e-191 673.7 642 56.9
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 3.1e-191 672.5 642 58.7
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 3.1e-191 672.5 644 58.5
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 1.5e-190 670.2 641 58.5
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 1.5e-190 670.2 639 57.9
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.0e-190 669.8 640 58.4
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.0e-190 669.8 640 58.4
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 2.0e-190 669.8 648 57.7
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 2.0e-190 669.8 639 58.8
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 2.6e-190 669.5 640 58.3
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 7.5e-190 667.9 629 56.6
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 2.2e-189 666.4 642 57.9
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 8.3e-189 664.5 640 58.9
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 1.4e-188 663.7 640 56.4
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 2.4e-188 662.9 641 56.8
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 3.2e-188 662.5 645 57.5
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 4.1e-188 662.1 640 59.2
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 7.1e-188 661.4 661 57.2
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 7.1e-188 661.4 628 59.4
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 2.7e-187 659.4 619 58.3
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 3.5e-187 659.1 632 58.4
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 1.3e-186 657.1 641 56.9
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 4.0e-183 645.6 640 55.6
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 8.9e-183 644.4 438 72.4
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.2e-182 644.0 653 53.3
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 2.0e-182 643.3 630 56.5
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 1.3e-181 640.6 547 62.7
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 1.7e-181 640.2 581 58.2
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 2.9e-181 639.4 644 55.4
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 1.4e-180 637.1 652 53.1
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.1e-180 635.6 650 53.1
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 9.2e-180 634.4 493 63.3
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 9.2e-180 634.4 493 63.3
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 1.2e-179 634.0 637 55.4
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 1.6e-179 633.6 646 54.8
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 5.6e-177 625.2 648 53.5
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 5.6e-177 625.2 642 54.0
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 1.6e-176 623.6 647 54.9
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 2.1e-176 623.2 653 55.0
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.4e-175 620.5 638 54.1
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 1.9e-172 610.1 643 54.0
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 2.4e-172 609.8 645 52.9
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 5.4e-172 608.6 644 52.8
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 3.1e-167 592.8 634 53.0
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.0e-166 590.1 462 62.1
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 1.7e-165 587.0 620 54.5
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 6.4e-165 585.1 628 53.0
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 5.4e-164 582.0 645 52.1
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 6.2e-160 568.5 625 53.3
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 5.8e-150 535.4 634 48.6
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 1.4e-148 530.8 515 56.5
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 2.1e-139 500.4 645 47.9
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 2.1e-139 500.4 354 68.4
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 2.4e-127 460.3 350 63.7
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 3.6e-123 446.4 649 41.8
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 8.8e-122 441.8 586 43.5
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 2.6e-121 440.3 464 49.6
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 8.2e-120 435.3 610 44.1
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 4.4e-113 412.9 508 45.1
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 1.5e-84 318.2 665 31.4
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 8.3e-80 302.4 517 36.0
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 2.2e-64 251.1 460 35.4
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 2.1e-54 218.0 510 30.4
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 2.8e-43 181.0 405 30.9
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 3.1e-26 124.4 98 58.2
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 3.1e-26 124.4 98 58.2
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 1.7e-24 118.6 98 56.1
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.6e-22 112.1 378 25.1


User provided reference genes

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