Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 3.0e-204 714.9 351 100.0
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 8.5e-151 537.3 354 73.4
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 1.5e-150 536.6 334 77.8
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 3.2e-150 535.4 334 77.5
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 4.1e-145 518.5 334 74.9
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 7.0e-145 517.7 346 75.7
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 9.1e-145 517.3 350 70.9
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 2.7e-144 515.8 351 71.8
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 2.3e-143 512.7 338 74.3
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 5.0e-143 511.5 345 73.6
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 5.0e-143 511.5 336 72.9
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 3.3e-142 508.8 333 76.6
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 9.5e-142 507.3 346 72.5
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 2.1e-141 506.1 346 72.5
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 2.1e-141 506.1 341 74.8
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 3.6e-141 505.4 329 74.2
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 3.6e-141 505.4 347 72.3
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 3.6e-141 505.4 349 71.9
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 1.0e-140 503.8 349 71.3
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 1.0e-140 503.8 344 71.8
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 5.2e-140 501.5 324 74.1
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 6.8e-140 501.1 341 72.4
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 8.9e-140 500.7 346 72.3
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 8.9e-140 500.7 344 73.3
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 7.5e-139 497.7 324 73.5
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 9.8e-139 497.3 351 70.7
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 2.2e-138 496.1 342 72.8
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 6.3e-138 494.6 344 70.3
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 3.2e-137 492.3 324 72.5
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 3.2e-137 492.3 340 71.5
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 9.2e-137 490.7 345 71.6
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 2.7e-136 489.2 308 76.6
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 1.3e-135 486.9 349 70.5
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 1.9e-134 483.0 342 69.3
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 7.3e-134 481.1 337 71.5
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 1.2e-133 480.3 325 73.8
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 2.1e-133 479.6 344 68.9
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 2.1e-133 479.6 333 69.7
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 3.6e-133 478.8 318 72.3
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 3.1e-132 475.7 344 68.6
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 4.0e-132 475.3 324 72.5
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 4.0e-132 475.3 343 70.3
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 2.0e-131 473.0 324 71.3
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 7.5e-131 471.1 348 67.8
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 9.8e-131 470.7 318 71.4
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 9.8e-131 470.7 318 71.4
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 1.7e-130 469.9 364 65.4
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 1.7e-130 469.9 344 70.3
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 2.9e-130 469.2 322 72.4
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 6.4e-130 468.0 345 67.8
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 3.2e-129 465.7 313 71.9
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 3.2e-129 465.7 309 72.8
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 4.1e-129 465.3 320 69.7
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 5.4e-129 464.9 329 68.4
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 1.0e-127 460.7 325 69.5
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 1.5e-126 456.8 315 69.2
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 7.3e-126 454.5 325 68.9
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 9.5e-126 454.1 320 70.0
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 9.5e-126 454.1 325 68.0
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 1.4e-124 450.3 349 65.6
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 6.8e-124 448.0 316 69.0
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 1.2e-123 447.2 324 67.0
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 1.5e-123 446.8 324 67.0
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 2.6e-123 446.0 332 69.3
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 9.8e-123 444.1 323 68.4
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 9.8e-123 444.1 323 68.4
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 1.3e-122 443.7 344 66.6
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 2.2e-122 443.0 309 67.3
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 2.9e-122 442.6 337 65.3
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 4.9e-122 441.8 337 65.0
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 8.3e-122 441.0 356 63.8
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 2.4e-121 439.5 337 64.7
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 4.6e-120 435.3 366 63.1
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 4.4e-115 418.7 318 65.7
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 4.4e-115 418.7 310 67.7
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 1.1e-113 414.1 285 73.3
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 1.9e-110 403.3 288 69.1
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 1.2e-109 400.6 291 68.4
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 1.6e-109 400.2 299 66.9
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 1.4e-108 397.1 287 69.0
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 2.7e-104 382.9 326 62.3
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 3.9e-103 379.0 242 75.2
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 1.9e-102 376.7 326 59.8
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 1.4e-100 370.5 308 61.7
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 2.0e-99 366.7 253 73.9
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 5.6e-94 348.6 224 76.8
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 6.4e-90 335.1 218 72.0
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 9.3e-89 331.3 318 58.5
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 6.7e-87 325.1 300 52.7
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 1.3e-85 320.9 308 53.9
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.1e-84 316.2 325 51.7
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 4.2e-81 305.8 212 70.8
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 1.2e-80 304.3 203 73.4
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 1.3e-79 300.8 315 47.9
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.7e-77 292.7 319 51.7
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 7.7e-67 258.5 196 65.3
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 1.1e-65 254.6 362 38.4
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 2.5e-65 253.4 312 44.2
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 1.4e-55 221.1 258 44.6
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 3.9e-55 219.5 323 41.5
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 8.8e-55 218.4 170 66.5
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 1.8e-44 184.1 200 50.0
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 6.8e-39 165.6 110 67.3
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 8.8e-39 165.2 216 45.4
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 1.3e-37 161.4 140 56.4
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 5.4e-36 156.0 88 81.8
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 2.7e-35 153.7 102 73.5
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 4.5e-35 152.9 90 78.9
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 5.9e-35 152.5 112 64.3
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 3.0e-31 140.2 345 31.6
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 9.1e-28 128.6 91 72.5
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 7.7e-27 125.6 274 29.9
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 5.0e-26 122.9 100 60.0
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 2.8e-24 117.1 142 48.6
Potri.017G115350 Populus trichocarpa HOM05D006950 ORTHO05D008798 1.3e-10 71.6 56 60.7
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 5.2e-07 59.7 30 76.7
Oeu051786.1 Olea europaea HOM05D000916 ORTHO05D007921 1.2e-06 58.5 156 30.8
TWI12G0975 Tripterygium wilfordii HOM05D000916 ORTHO05D007921 2.0e-06 57.8 138 30.4
MBI03_g28954_MAGBIO Magnolia biondii HOM05D000916 ORTHO05D007921 2.6e-06 57.4 142 31.7
MSTRG.25473 Avicennia marina HOM05D000916 ORTHO05D007921 5.8e-06 56.2 303 28.4
AUR62017447 Chenopodium quinoa HOM05D000916 ORTHO05D007921 5.8e-06 56.2 166 30.7
Eucgr.F04110 Eucalyptus grandis HOM05D000916 ORTHO05D007921 5.8e-06 56.2 290 27.9
Medtr1g076920 Medicago truncatula HOM05D000916 ORTHO05D007921 9.8e-06 55.5 91 38.5


User provided reference genes

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