Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 2.4e-75 285.4 147 100.0
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 3.3e-64 248.4 141 87.9
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 1.6e-63 246.1 143 85.3
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 2.2e-63 245.7 145 84.8
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 2.8e-63 245.4 145 82.1
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 3.7e-63 245.0 145 82.1
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 4.8e-63 244.6 147 85.0
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 6.3e-63 244.2 145 83.4
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 8.2e-63 243.8 140 85.0
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 1.4e-62 243.0 145 82.1
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 1.8e-62 242.7 147 82.3
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 2.4e-62 242.3 145 80.7
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 2.4e-62 242.3 140 84.3
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 3.1e-62 241.9 142 85.2
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 5.3e-62 241.1 145 80.0
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 6.9e-62 240.7 145 82.8
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 6.9e-62 240.7 145 82.8
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 9.0e-62 240.4 147 77.6
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 1.2e-61 240.0 143 81.8
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 1.5e-61 239.6 142 83.8
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 2.0e-61 239.2 147 77.6
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 2.6e-61 238.8 145 82.1
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 3.4e-61 238.4 141 81.6
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 4.5e-61 238.0 145 80.7
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 4.5e-61 238.0 145 82.8
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 7.6e-61 237.3 147 78.2
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 1.0e-60 236.9 143 80.4
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 2.2e-60 235.7 143 80.4
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 2.2e-60 235.7 147 76.2
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 3.8e-60 235.0 143 81.8
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 1.1e-59 233.4 144 77.8
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 1.4e-59 233.0 145 82.8
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 1.9e-59 232.6 141 80.9
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 2.5e-59 232.3 143 81.1
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 2.5e-59 232.3 143 78.3
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 3.2e-59 231.9 143 77.6
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 3.2e-59 231.9 142 81.7
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 4.2e-59 231.5 143 79.0
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 7.2e-59 230.7 144 79.9
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 9.4e-59 230.3 145 75.9
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 1.2e-58 229.9 145 77.9
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 1.2e-58 229.9 143 79.7
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 1.6e-58 229.6 138 79.0
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 2.7e-58 228.8 143 79.0
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 3.6e-58 228.4 140 78.6
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 3.6e-58 228.4 140 78.6
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 3.6e-58 228.4 141 80.1
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 3.6e-58 228.4 143 79.7
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 7.9e-58 227.3 140 80.7
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 7.9e-58 227.3 141 77.3
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 5.1e-57 224.6 145 75.9
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 8.8e-57 223.8 143 76.9
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 1.1e-56 223.4 142 78.9
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 1.1e-56 223.4 142 78.2
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 1.9e-56 222.6 143 76.2
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 3.3e-56 221.9 143 76.2
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 3.3e-56 221.9 131 83.2
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 7.4e-56 220.7 151 72.8
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 1.3e-55 219.9 143 75.5
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 1.3e-55 219.9 138 79.0
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 4.8e-55 218.0 154 72.7
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 1.4e-54 216.5 145 73.8
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 2.4e-54 215.7 145 75.2
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 3.1e-54 215.3 153 70.6
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 1.2e-53 213.4 143 76.2
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 1.5e-53 213.0 147 74.1
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 1.5e-53 213.0 143 69.2
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 1.0e-52 210.3 129 81.4
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 1.7e-52 209.5 152 70.4
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 2.2e-52 209.1 142 75.4
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 5.0e-52 208.0 145 71.7
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 1.9e-51 206.1 145 72.4
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 9.4e-51 203.8 143 73.4
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 2.7e-50 202.2 194 58.8
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 4.7e-50 201.4 130 74.6
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.5e-48 196.4 140 71.4
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 1.5e-48 196.4 139 72.7
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 3.7e-47 191.8 156 66.7
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 4.8e-47 191.4 155 66.5
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 2.4e-46 189.1 109 83.5
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 3.1e-46 188.7 111 83.8
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 5.9e-45 184.5 126 76.2
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 1.0e-44 183.7 143 63.6
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 1.7e-44 183.0 148 62.8
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 6.1e-42 174.5 112 72.3
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 1.0e-41 173.7 140 63.6
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 1.5e-40 169.9 144 58.3
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 1.5e-40 169.9 123 71.5
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 2.0e-40 169.5 144 60.4
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 2.0e-40 169.5 144 58.3
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 3.3e-40 168.7 144 57.6
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 5.7e-40 167.9 144 56.9
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 5.7e-40 167.9 148 57.4
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 1.7e-39 166.4 145 56.6
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 2.2e-39 166.0 144 56.9
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 2.8e-39 165.6 139 57.6
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 4.8e-39 164.9 141 63.1
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 6.3e-39 164.5 144 56.9
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 6.3e-39 164.5 144 56.9
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 1.4e-38 163.3 145 55.9
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 1.4e-38 163.3 145 55.2
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 1.4e-38 163.3 144 56.2
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 5.3e-38 161.4 133 62.4
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 1.6e-37 159.8 144 55.6
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 1.6e-37 159.8 144 55.6
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 3.8e-36 155.2 116 65.5
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 2.0e-32 142.9 143 55.9
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 2.6e-32 142.5 103 68.9
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 1.7e-31 139.8 151 56.3
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 3.7e-31 138.7 116 59.5
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 9.1e-30 134.0 141 50.4
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 1.3e-28 130.2 81 77.8
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 7.2e-27 124.4 68 89.7
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 1.4e-22 110.2 65 76.9
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 2.6e-16 89.4 75 57.3
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 6.3e-15 84.7 96 50.0
Sabra10G0124400 Salix brachista HOM05D006937 ORTHO05D008747 2.9e-12 75.9 112 42.9
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 1.9e-11 73.2 56 67.9
Cpa.g.sc1.69 Carica papaya HOM05D006937 ORTHO05D008747 5.8e-08 61.6 36 83.3
PRCOL_00006274 Prasinoderma coloniale HOM05D006937 ORTHO05D008747 1.9e-06 56.6 138 31.2
Cc00_g19610 Coffea canephora HOM05D000421 ORTHO05D013979 7.0e-06 54.7 33 75.8
Cc08_g04320 Coffea canephora HOM05D006937 ORTHO05D013979 7.0e-06 54.7 33 75.8
COL.COLO4_21409 Corchorus olitorius HOM05D005191 ORTHO05D016248 7.0e-06 54.7 31 80.6


User provided reference genes

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