Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2822 Trochodendron aralioides HOM05D005736 ORTHO05D007215 1.8e-96 355.9 181 100.0
TAR636G3309 Trochodendron aralioides HOM05D005736 ORTHO05D007215 2.2e-73 279.3 148 94.6
TAR362G0909 Trochodendron aralioides HOM05D005736 ORTHO05D007215 5.7e-42 174.9 133 69.2
TAR633G1366 Trochodendron aralioides HOM05D005736 ORTHO05D007215 5.4e-40 168.3 109 79.8
Actinidia16813 Actinidia chinensis HOM05D005736 ORTHO05D007215 1.5e-37 160.2 107 75.7
Nn3g21454 Nelumbo nucifera HOM05D005736 ORTHO05D007215 1.9e-37 159.8 108 72.2
ATR0796G081 Amborella trichopoda HOM05D005736 ORTHO05D007215 8.0e-36 154.5 109 71.6
Rhsim07G0188500 Rhododendron simsii HOM05D002832 ORTHO05D008667 8.0e-36 154.5 112 67.0
Sabra13G0020000 Salix brachista HOM05D005736 ORTHO05D007215 1.8e-35 153.3 102 72.5
Aqoxy5G00736 Aquilegia oxysepala HOM05D005736 ORTHO05D007215 2.3e-35 152.9 108 69.4
Manes.09G170200 Manihot esculenta HOM05D005736 ORTHO05D007215 2.3e-35 152.9 109 69.7
Potri.013G017000 Populus trichocarpa HOM05D005736 ORTHO05D007215 2.3e-35 152.9 102 72.5
vmacro04813 Vaccinium macrocarpon HOM05D005736 ORTHO05D007215 2.3e-35 152.9 106 70.8
Dinv30811 Davidia involucrata HOM05D005736 ORTHO05D007215 4.0e-35 152.1 105 72.4
Sabra13G0015800 Salix brachista HOM05D005736 ORTHO05D007215 5.2e-35 151.8 102 71.6
Sc09g0002940 Simmondsia chinensis HOM05D005736 ORTHO05D007215 8.9e-35 151.0 109 68.8
CSS0016231 Camellia sinensis var. sinensis HOM05D005736 ORTHO05D007215 1.5e-34 150.2 107 72.0
CDE02G3291 Ceratophyllum demersum HOM05D005736 ORTHO05D007215 2.0e-34 149.8 105 69.5
Thecc.05G313100 Theobroma cacao HOM05D005736 ORTHO05D007215 3.4e-34 149.1 102 71.6
CSS0007199 Camellia sinensis var. sinensis HOM05D005736 ORTHO05D007215 9.8e-34 147.5 107 71.0
BcaB04g21446 Brassica carinata HOM05D005736 ORTHO05D007215 1.3e-33 147.1 109 67.0
Ciclev10001982m.g Citrus clementina HOM05D005736 ORTHO05D007215 1.3e-33 147.1 100 73.0
Peaxi162Scf00037g01216 Petunia axillaris HOM05D005736 ORTHO05D007215 1.3e-33 147.1 103 68.9
Atru.chr2.31 Acer truncatum HOM05D005736 ORTHO05D007215 1.7e-33 146.7 100 72.0
Haze_04138 Corylus avellana HOM05D005736 ORTHO05D007215 1.7e-33 146.7 128 57.0
GSVIVG01031141001 Vitis vinifera HOM05D005736 ORTHO05D007215 1.7e-33 146.7 96 74.0
Nitab4.5_0003658g0100 Nicotiana tabacum HOM05D001134 ORTHO05D001035 2.9e-33 146.0 103 68.0
Duzib106G0969 Durio zibethinus HOM05D005736 ORTHO05D007215 3.7e-33 145.6 102 68.6
Potri.005G025300 Populus trichocarpa HOM05D005736 ORTHO05D007215 4.9e-33 145.2 102 68.6
PGR031G0613 Punica granatum HOM05D005736 ORTHO05D007215 6.4e-33 144.8 110 68.2
AL3G16120 Arabidopsis lyrata HOM05D005736 ORTHO05D007215 8.3e-33 144.4 109 66.1
Sp3g04350 Schrenkiella parvula HOM05D005736 ORTHO05D007215 1.1e-32 144.1 109 65.1
CARHR079910 Cardamine hirsuta HOM05D005736 ORTHO05D007215 1.4e-32 143.7 109 66.1
Hma1.2p1_1292F.1_g273760 Hydrangea macrophylla HOM05D005736 ORTHO05D007215 1.4e-32 143.7 105 66.7
QL03p020205 Quercus lobata HOM05D005736 ORTHO05D007215 1.4e-32 143.7 137 55.5
Aa31LG5G15870 Aethionema arabicum HOM05D005736 ORTHO05D007215 1.9e-32 143.3 109 64.2
BcaC09g47830 Brassica carinata HOM05D005736 ORTHO05D007215 1.9e-32 143.3 109 65.1
BNapus_Darmor_BZH_scaffold_114p00020 Brassica napus HOM05D005736 ORTHO05D007215 1.9e-32 143.3 109 65.1
BraSC132t45500Z Brassica rapa HOM05D005736 ORTHO05D007215 1.9e-32 143.3 109 65.1
Cpa.g.sc48.100 Carica papaya HOM05D005736 ORTHO05D007215 1.9e-32 143.3 109 67.9
Gohir.D11G277900 Gossypium hirsutum HOM05D005736 ORTHO05D007215 3.2e-32 142.5 102 68.6
Gorai.007G300100 Gossypium raimondii HOM05D005736 ORTHO05D007215 3.2e-32 142.5 102 68.6
Nitab4.5_0003844g0030 Nicotiana tabacum HOM05D005736 ORTHO05D007215 3.2e-32 142.5 101 67.3
Psat3g011440 Pisum sativum HOM05D005736 ORTHO05D007215 3.2e-32 142.5 103 67.0
CiPaw.07G021500 Carya illinoinensis HOM05D005736 ORTHO05D007215 4.1e-32 142.1 100 70.0
Cc02_g34150 Coffea canephora HOM05D005736 ORTHO05D007215 4.1e-32 142.1 101 70.3
TPR.G33191 Trifolium pratense HOM05D005736 ORTHO05D007215 4.1e-32 142.1 103 67.0
Oeu043344.1 Olea europaea HOM05D005736 ORTHO05D007215 5.4e-32 141.7 102 67.6
Medtr7g112700 Medicago truncatula HOM05D005736 ORTHO05D007215 7.0e-32 141.4 103 66.0
BraA03t12591Z Brassica rapa HOM05D005736 ORTHO05D007215 1.2e-31 140.6 109 64.2
Prupe.6G320500 Prunus persica HOM05D005736 ORTHO05D007215 1.2e-31 140.6 130 56.2
EL10Ac4g09914 Beta vulgaris HOM05D005736 ORTHO05D007215 1.6e-31 140.2 109 64.2
BolC1t05691H Brassica oleracea HOM05D005736 ORTHO05D007215 1.6e-31 140.2 109 64.2
Ah.06g189800 Amaranthus hybridus HOM05D005736 ORTHO05D007215 2.0e-31 139.8 109 62.4
MSTRG.20415 Avicennia marina HOM05D005736 ORTHO05D007215 2.0e-31 139.8 131 56.5
Lsat_1_v5_gn_7_69261 Lactuca sativa HOM05D005736 ORTHO05D007215 2.0e-31 139.8 107 65.4
Hund07098 Selenicereus undatus HOM05D005736 ORTHO05D007215 2.0e-31 139.8 97 66.0
TWI36G0679 Tripterygium wilfordii HOM05D005736 ORTHO05D007215 2.0e-31 139.8 100 68.0
Actinidia35560 Actinidia chinensis HOM05D002832 ORTHO05D008667 3.5e-31 139.0 102 71.6
A03p34170 Brassica napus HOM05D005736 ORTHO05D007215 3.5e-31 139.0 109 64.2
C03p41560 Brassica napus HOM05D005736 ORTHO05D007215 3.5e-31 139.0 109 65.1
BolC3t16437H Brassica oleracea HOM05D005736 ORTHO05D007215 3.5e-31 139.0 109 64.2
Migut.N02084 Erythranthe guttata HOM05D005736 ORTHO05D007215 3.5e-31 139.0 96 68.8
Sopen01g043240 Solanum pennellii HOM05D005736 ORTHO05D007215 3.5e-31 139.0 105 61.9
PGSC0003DMG400024712 Solanum tuberosum HOM05D005736 ORTHO05D007215 3.5e-31 139.0 105 61.9
SGA_v2.0_scaffold196G40952 Striga asiatica HOM05D005736 ORTHO05D007215 3.5e-31 139.0 102 63.7
Thhalv10021069m.g Eutrema salsugineum HOM05D005736 ORTHO05D007215 4.6e-31 138.7 109 63.3
PSO210G0197 Papaver somniferum HOM05D005736 ORTHO05D007215 4.6e-31 138.7 103 62.1
Migut.O00559 Erythranthe guttata HOM05D005736 ORTHO05D007215 7.8e-31 137.9 103 64.1
PSO832G2303 Papaver somniferum HOM05D005736 ORTHO05D007215 7.8e-31 137.9 103 62.1
BcaB04g19260 Brassica carinata HOM05D005736 ORTHO05D007215 1.0e-30 137.5 109 64.2
Gohir.A11G268000 Gossypium hirsutum HOM05D005736 ORTHO05D007215 1.0e-30 137.5 102 66.7
Lalb_Chr15g0077351 Lupinus albus HOM05D005736 ORTHO05D007215 1.0e-30 137.5 109 64.2
AUR62000762 Chenopodium quinoa HOM05D005736 ORTHO05D007215 1.3e-30 137.1 101 62.4
AUR62005207 Chenopodium quinoa HOM05D005736 ORTHO05D007215 1.3e-30 137.1 101 62.4
COL.COLO4_10521 Corchorus olitorius HOM05D005736 ORTHO05D007215 1.3e-30 137.1 102 66.7
DCAR_003356 Daucus carota HOM05D005736 ORTHO05D007215 1.3e-30 137.1 102 64.7
AT3G05520 Arabidopsis thaliana HOM05D005736 ORTHO05D007215 1.7e-30 136.7 109 63.3
MD12G1212900 Malus domestica HOM05D005736 ORTHO05D007215 1.7e-30 136.7 130 54.6
BcaB04g19261 Brassica carinata HOM05D005736 ORTHO05D007215 2.3e-30 136.3 109 63.3
CANSAT54G0716 Cannabis sativa HOM05D005736 ORTHO05D007215 2.3e-30 136.3 100 62.0
Carub.0003s0481 Capsella rubella HOM05D005736 ORTHO05D007215 2.3e-30 136.3 110 63.6
Gorai.007G341300 Gossypium raimondii HOM05D005736 ORTHO05D007215 2.3e-30 136.3 102 63.7
Solyc09g065950.3 Solanum lycopersicum HOM05D005736 ORTHO05D007215 2.3e-30 136.3 105 61.0
CAN.G1459.12 Capsicum annuum HOM05D005736 ORTHO05D007215 3.9e-30 135.6 103 61.2
MD04G1200300 Malus domestica HOM05D005736 ORTHO05D007215 3.9e-30 135.6 130 54.6
Gohir.A11G294600 Gossypium hirsutum HOM05D005736 ORTHO05D007215 6.6e-30 134.8 102 62.7
HPP92_002147 Vanilla planifolia HOM05D005736 ORTHO05D007215 8.6e-30 134.4 105 60.0
RcHm_v2.0_Chr3g0455751 Rosa chinensis HOM05D005736 ORTHO05D007215 1.9e-29 133.3 130 56.2
ECA234G1428 Erigeron canadensis HOM05D005736 ORTHO05D007215 2.5e-29 132.9 96 62.5
Eucgr.H04534 Eucalyptus grandis HOM05D005736 ORTHO05D007215 2.5e-29 132.9 105 62.9
Sed0015517 Sechium edule HOM05D005736 ORTHO05D007215 2.5e-29 132.9 130 51.5
THA.LOC104818718 Tarenaya hassleriana HOM05D005736 ORTHO05D007215 2.5e-29 132.9 109 60.6
Lj1g0012360 Lotus japonicus HOM05D005736 ORTHO05D007215 4.3e-29 132.1 109 59.6
arahy.Tifrunner.gnm1.ann1.7HV2PX Arachis hypogaea HOM05D005736 ORTHO05D007215 7.3e-29 131.3 103 61.2
arahy.Tifrunner.gnm1.ann1.B5Q7D5 Arachis hypogaea HOM05D005736 ORTHO05D007215 7.3e-29 131.3 103 61.2
MELO3C004216.2 Cucumis melo HOM05D005736 ORTHO05D007215 7.3e-29 131.3 130 50.0
CsaV3_2G006740 Cucumis sativus L. HOM05D005736 ORTHO05D007215 7.3e-29 131.3 102 57.8
Phvul.006G089500 Phaseolus vulgaris HOM05D005736 ORTHO05D007215 7.3e-29 131.3 103 61.2
unitig_46.g18363 Utricularia gibba HOM05D005736 ORTHO05D007215 1.2e-28 130.6 103 61.2
Glyma.03G235500 Glycine max HOM05D005736 ORTHO05D007215 1.6e-28 130.2 103 60.2
ClCG02G015270 Citrullus lanatus HOM05D005736 ORTHO05D007215 2.8e-28 129.4 130 49.2
HanXRQChr16g0513361 Helianthus annuus HOM05D005736 ORTHO05D007215 2.8e-28 129.4 109 58.7
VMungo0540G0827 Vigna mungo HOM05D005736 ORTHO05D007215 2.8e-28 129.4 103 60.2
FvH4_6g06571 Fragaria vesca HOM05D005736 ORTHO05D007215 3.6e-28 129.0 130 53.8
RcHm_v2.0_Chr1g0322051 Rosa chinensis HOM05D005736 ORTHO05D007215 3.6e-28 129.0 102 63.7
Zm00001eb111300 Zea mays HOM05D005736 ORTHO05D007215 6.2e-28 128.3 95 60.0
HanXRQChr10g0296691 Helianthus annuus HOM05D005736 ORTHO05D007215 1.1e-27 127.5 105 61.0
FAN02G0934 Fragaria x ananassa HOM05D005736 ORTHO05D007215 1.4e-27 127.1 101 62.4
Zm00001eb330450 Zea mays HOM05D005736 ORTHO05D007215 1.4e-27 127.1 95 56.8
Glyma.19G233300 Glycine max HOM05D005736 ORTHO05D007215 1.8e-27 126.7 109 60.6
RcHm_v2.0_Chr1g0322151 Rosa chinensis HOM05D005736 ORTHO05D007215 1.8e-27 126.7 102 62.7
Cfa006630 Carpinus fangiana HOM05D005736 ORTHO05D007215 4.0e-27 125.6 128 51.6
unitig_48.g30289 Utricularia gibba HOM05D005736 ORTHO05D007215 6.8e-27 124.8 102 60.8
FAN05G2751 Fragaria x ananassa HOM05D001134 ORTHO05D007215 5.4e-24 115.2 96 60.4
FAN09G2204 Fragaria x ananassa HOM05D001134 ORTHO05D007215 1.6e-23 113.6 96 60.4
Pp3c20_23130 Physcomitrium patens HOM05D005736 ORTHO05D007215 1.7e-22 110.2 103 53.4
AagrBONN_evm.TU.Sc2ySwM_344.5036 Anthoceros agrestis HOM05D005736 ORTHO05D007215 3.9e-22 109.0 103 50.5
Mapoly0002s0253 Marchantia polymorpha HOM05D005736 ORTHO05D007215 3.9e-22 109.0 106 49.1
FAN14G1274 Fragaria x ananassa HOM05D001134 ORTHO05D001035 8.1e-20 101.3 106 52.8
SMO196G0013 Selaginella moellendorffii HOM05D005736 ORTHO05D007215 8.9e-19 97.8 83 55.4
BcaB05g23235 Brassica carinata HOM05D005736 ORTHO05D007215 1.7e-17 93.6 69 62.3
unitig_48.g30291 Utricularia gibba HOM05D003281 ORTHO05D004128 3.2e-16 89.4 75 56.0
MBI18_g08112_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 1.2e-15 87.4 56 73.2
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 6.0e-15 85.1 63 63.5
Pp3c10_25170 Physcomitrium patens HOM05D005736 ORTHO05D007215 3.0e-06 56.2 43 62.8
Gohir.D11G309300 Gossypium hirsutum HOM05D005736 ORTHO05D007215 8.7e-06 54.7 37 67.6


User provided reference genes

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