Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 3.8e-114 414.8 208 100.0
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 5.9e-67 258.1 207 65.7
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 7.7e-67 257.7 208 65.9
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 2.9e-66 255.8 179 73.7
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 2.0e-62 243.0 214 65.0
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 5.7e-62 241.5 217 65.0
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 1.3e-61 240.4 190 63.7
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 2.2e-61 239.6 211 63.0
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 3.7e-61 238.8 208 61.5
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 1.4e-60 236.9 213 62.4
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 1.8e-60 236.5 207 59.9
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 1.8e-60 236.5 190 61.6
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 9.2e-60 234.2 180 68.3
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 1.2e-59 233.8 208 58.7
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 2.0e-59 233.0 181 65.2
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 2.7e-59 232.6 218 59.6
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 2.7e-59 232.6 207 59.9
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 5.9e-59 231.5 208 61.1
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 1.0e-58 230.7 182 67.0
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 3.8e-58 228.8 212 60.4
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 5.0e-58 228.4 182 65.9
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 6.6e-58 228.0 206 59.7
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 1.1e-57 227.3 211 61.6
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 1.9e-57 226.5 174 69.5
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 2.5e-57 226.1 172 68.6
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 7.3e-57 224.6 149 77.9
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 7.3e-57 224.6 213 57.7
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 1.2e-56 223.8 193 61.1
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 1.2e-56 223.8 218 58.3
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 2.1e-56 223.0 213 60.1
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 2.8e-56 222.6 176 65.3
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 3.6e-56 222.2 207 54.1
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 4.7e-56 221.9 189 67.2
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 4.7e-56 221.9 214 60.7
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 1.0e-55 220.7 208 59.1
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 3.1e-55 219.2 213 56.8
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 4.0e-55 218.8 225 57.8
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 5.2e-55 218.4 171 68.4
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 1.2e-54 217.2 179 65.4
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 1.2e-54 217.2 226 56.6
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 2.0e-54 216.5 207 57.5
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 3.4e-54 215.7 213 58.7
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 4.4e-54 215.3 214 57.5
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 9.8e-54 214.2 177 62.7
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 9.8e-54 214.2 209 57.4
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 1.3e-53 213.8 211 57.8
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 2.2e-53 213.0 209 57.4
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 2.2e-53 213.0 148 75.0
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 2.2e-53 213.0 210 59.0
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 6.4e-53 211.5 183 60.7
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 3.2e-52 209.1 208 56.2
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 3.2e-52 209.1 193 58.5
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 5.4e-52 208.4 206 55.3
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 7.0e-52 208.0 183 62.3
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 9.2e-52 207.6 156 67.9
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 1.6e-51 206.8 207 55.1
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 1.6e-51 206.8 207 55.1
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 7.8e-51 204.5 178 62.4
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 5.0e-50 201.8 145 72.4
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 5.0e-50 201.8 170 61.8
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 6.6e-50 201.4 178 61.2
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 2.5e-49 199.5 148 71.6
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 3.3e-49 199.1 183 60.1
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 3.3e-49 199.1 117 83.8
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 4.3e-49 198.7 136 72.1
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 7.3e-49 198.0 208 56.7
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 1.6e-48 196.8 139 72.7
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 2.1e-48 196.4 182 57.1
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 2.8e-48 196.1 183 59.6
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 3.6e-48 195.7 124 79.0
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 1.8e-47 193.4 119 80.7
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 1.8e-47 193.4 180 62.2
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 1.8e-47 193.4 206 53.4
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 4.0e-47 192.2 135 71.9
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 5.2e-47 191.8 178 58.4
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 1.5e-46 190.3 118 78.0
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 7.5e-46 188.0 160 65.0
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 7.5e-46 188.0 118 78.0
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 1.3e-45 187.2 145 66.9
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 8.3e-45 184.5 102 85.3
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 1.1e-44 184.1 137 69.3
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 1.1e-44 184.1 137 69.3
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 1.1e-44 184.1 137 69.3
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 1.1e-44 184.1 109 84.4
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 1.4e-44 183.7 145 66.2
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 1.4e-44 183.7 108 85.2
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 2.4e-44 183.0 105 86.7
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 3.2e-44 182.6 145 65.5
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 4.1e-44 182.2 114 78.9
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 4.1e-44 182.2 103 87.4
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 4.1e-44 182.2 109 81.7
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 5.4e-44 181.8 101 88.1
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 7.0e-44 181.4 114 78.9
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 4.6e-43 178.7 115 78.3
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 4.6e-43 178.7 119 74.8
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.7e-42 176.8 119 73.9
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 3.9e-42 175.6 116 74.1
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 5.1e-42 175.3 113 77.0
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 6.6e-42 174.9 147 62.6
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 4.3e-41 172.2 102 84.3
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 1.6e-40 170.2 107 78.5
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 5.4e-36 155.2 119 65.5
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 3.9e-34 149.1 118 61.9
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 6.6e-34 148.3 111 63.1
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 6.6e-34 148.3 103 67.0
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 9.5e-33 144.4 88 80.7
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 2.0e-30 136.7 120 56.7
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 1.7e-29 133.7 80 82.5
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 5.4e-28 128.6 71 87.3
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 3.0e-26 122.9 184 42.9
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 3.5e-19 99.4 93 51.6
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 3.0e-18 96.3 56 83.9
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 7.3e-17 91.7 62 75.8
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 7.3e-17 91.7 74 58.1
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 9.6e-17 91.3 44 90.9
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 2.2e-13 80.1 60 63.3
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 1.8e-10 70.5 44 72.7


User provided reference genes

Program Settings