Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 1.6e-55 219.2 111 100.0
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 2.8e-39 165.2 111 75.7
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 9.6e-32 140.2 109 66.1
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 1.3e-31 139.8 97 73.2
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 6.2e-31 137.5 118 65.3
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 2.4e-30 135.6 125 64.0
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 4.0e-30 134.8 98 68.4
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 5.3e-30 134.4 114 66.7
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 6.9e-30 134.0 97 70.1
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 2.0e-29 132.5 118 66.9
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 2.6e-29 132.1 99 69.7
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 2.6e-29 132.1 99 69.7
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 3.4e-29 131.7 100 69.0
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 4.5e-29 131.3 78 83.3
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 4.5e-29 131.3 112 66.1
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 4.5e-29 131.3 98 67.3
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 1.7e-28 129.4 111 62.2
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 2.9e-28 128.6 79 83.5
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 2.9e-28 128.6 127 61.4
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 4.9e-28 127.9 85 76.5
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 4.9e-28 127.9 131 58.8
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 1.1e-27 126.7 122 61.5
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 1.1e-27 126.7 91 72.5
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 1.9e-27 125.9 79 82.3
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 2.4e-27 125.6 91 71.4
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 2.4e-27 125.6 112 59.8
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 3.2e-27 125.2 91 72.5
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 3.2e-27 125.2 91 72.5
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 3.2e-27 125.2 110 62.7
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 4.2e-27 124.8 114 64.0
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 7.1e-27 124.0 91 70.3
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 1.2e-26 123.2 113 61.1
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 1.6e-26 122.9 79 79.7
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 6.0e-26 120.9 79 79.7
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 7.9e-26 120.6 99 67.7
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 7.9e-26 120.6 113 60.2
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 7.9e-26 120.6 81 77.8
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 1.0e-25 120.2 113 60.2
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 1.3e-25 119.8 74 83.8
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 1.8e-25 119.4 73 75.3
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 1.8e-25 119.4 119 56.3
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 2.3e-25 119.0 114 62.3
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 2.3e-25 119.0 107 58.9
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 3.9e-25 118.2 118 57.6
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 8.7e-25 117.1 78 71.8
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 8.7e-25 117.1 68 86.8
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 1.1e-24 116.7 79 73.4
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 1.5e-24 116.3 110 57.3
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 1.5e-24 116.3 79 69.6
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 1.9e-24 115.9 79 67.1
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 1.9e-24 115.9 97 58.8
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 2.5e-24 115.5 141 54.6
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 7.4e-24 114.0 97 67.0
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 9.6e-24 113.6 106 65.1
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 9.6e-24 113.6 106 65.1
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 9.6e-24 113.6 106 65.1
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 9.6e-24 113.6 78 67.9
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 9.6e-24 113.6 88 61.4
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 9.6e-24 113.6 72 83.3
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 9.6e-24 113.6 79 75.9
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 1.3e-23 113.2 106 56.6
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 2.1e-23 112.5 75 77.3
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 2.1e-23 112.5 76 76.3
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 2.8e-23 112.1 110 55.5
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 3.7e-23 111.7 103 62.1
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 4.8e-23 111.3 75 76.0
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 4.8e-23 111.3 92 67.4
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 4.8e-23 111.3 77 74.0
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 4.8e-23 111.3 116 55.2
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 6.2e-23 110.9 76 78.9
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 6.2e-23 110.9 78 70.5
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 6.2e-23 110.9 75 77.3
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 6.2e-23 110.9 79 65.8
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 6.2e-23 110.9 80 73.8
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 6.2e-23 110.9 79 73.4
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 1.1e-22 110.2 78 66.7
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 1.8e-22 109.4 76 77.6
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 2.4e-22 109.0 91 67.0
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 2.4e-22 109.0 71 76.1
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 3.1e-22 108.6 74 77.0
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 3.1e-22 108.6 78 64.1
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 4.0e-22 108.2 75 73.3
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 4.0e-22 108.2 79 72.2
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 4.0e-22 108.2 125 52.8
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 5.3e-22 107.8 87 66.7
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 6.9e-22 107.5 78 71.8
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 6.9e-22 107.5 78 71.8
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 6.9e-22 107.5 78 71.8
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 6.9e-22 107.5 84 69.0
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 1.2e-21 106.7 105 59.0
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 2.6e-21 105.5 75 73.3
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 2.6e-21 105.5 88 60.2
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 4.5e-21 104.8 95 58.9
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 4.5e-21 104.8 75 73.3
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 4.5e-21 104.8 97 55.7
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 4.5e-21 104.8 97 55.7
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 4.5e-21 104.8 96 59.4
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 2.2e-20 102.4 102 55.9
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 2.2e-20 102.4 91 63.7
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 2.9e-20 102.1 96 53.1
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 3.8e-20 101.7 134 49.3
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 6.5e-20 100.9 69 76.8
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 1.9e-19 99.4 61 82.0
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 7.1e-19 97.4 99 51.5
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 9.3e-19 97.1 63 81.0
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 9.3e-19 97.1 63 81.0
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 1.0e-17 93.6 74 63.5
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 1.0e-17 93.6 72 58.3
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 1.9e-16 89.4 74 58.1
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 3.3e-16 88.6 60 78.3
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 4.3e-16 88.2 77 53.2
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 2.2e-15 85.9 181 36.5
Hma1.2p1_0816F.1_g222980 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 5.9e-13 77.8 58 70.7
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 6.5e-12 74.3 113 37.2
COL.COLO4_37022 Corchorus olitorius HOM05D006666 ORTHO05D008276 1.2e-10 70.1 52 75.0
Cre03.g203800 Chlamydomonas reinhardtii HOM05D006666 ORTHO05D008276 3.0e-09 65.5 68 52.9
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 3.9e-09 65.1 47 55.3


User provided reference genes

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