Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2775 Trochodendron aralioides HOM05D004165 ORTHO05D005063 0.0e+00 1091.6 533 100.0
TAR628G1404 Trochodendron aralioides HOM05D004165 ORTHO05D005063 1.9e-234 815.8 828 56.8
MBI01_g36155_MAGBIO Magnolia biondii HOM05D004165 ORTHO05D005063 6.3e-121 438.7 813 36.5
GSVIVG01022257001 Vitis vinifera HOM05D004165 ORTHO05D005063 1.0e-118 431.4 604 43.0
Dinv21242 Davidia involucrata HOM05D004165 ORTHO05D005063 3.3e-114 416.4 818 36.2
Nn5g28841 Nelumbo nucifera HOM05D004165 ORTHO05D005063 2.8e-113 413.3 835 35.6
Lj4C863G6 Lonicera japonica HOM05D004165 ORTHO05D005063 2.4e-104 383.6 673 38.3
Thecc.01G115900 Theobroma cacao HOM05D004165 ORTHO05D005063 2.9e-102 376.7 793 33.0
COL.COLO4_22365 Corchorus olitorius HOM05D004165 ORTHO05D005063 3.2e-101 373.2 794 32.1
Cfa002775 Carpinus fangiana HOM05D004165 ORTHO05D005063 3.4e-98 363.2 765 34.9
Duzib147G0774 Durio zibethinus HOM05D004165 ORTHO05D005063 5.7e-98 362.5 793 32.2
QL06p031599 Quercus lobata HOM05D004165 ORTHO05D005063 9.8e-98 361.7 814 33.4
Ciclev10024679m.g Citrus clementina HOM05D004165 ORTHO05D005063 1.3e-97 361.3 803 33.6
Dinv05635 Davidia involucrata HOM05D004165 ORTHO05D005063 4.8e-97 359.4 722 36.1
CiPaw.03G132500 Carya illinoinensis HOM05D004165 ORTHO05D005063 1.8e-96 357.5 816 32.8
CSS0013219 Camellia sinensis var. sinensis HOM05D004165 ORTHO05D005063 1.2e-95 354.8 816 32.2
Gohir.A12G083100 Gossypium hirsutum HOM05D004165 ORTHO05D005063 1.2e-95 354.8 805 32.2
Atru.chr4.460 Acer truncatum HOM05D004165 ORTHO05D005063 1.6e-95 354.4 826 31.5
Haze_25071 Corylus avellana HOM05D004165 ORTHO05D005063 1.5e-93 347.8 811 32.6
Potri.007G078650 Populus trichocarpa HOM05D004165 ORTHO05D005063 2.5e-93 347.1 794 32.2
Aqoxy5G02023 Aquilegia oxysepala HOM05D004165 ORTHO05D005063 9.4e-93 345.1 809 33.0
Gorai.008G100800 Gossypium raimondii HOM05D004165 ORTHO05D005063 1.2e-92 344.7 807 31.8
Gohir.D12G093100 Gossypium hirsutum HOM05D004165 ORTHO05D005063 2.7e-92 343.6 807 31.7
PSO210G1143 Papaver somniferum HOM05D004165 ORTHO05D005063 2.3e-91 340.5 805 32.4
PSO170G0015 Papaver somniferum HOM05D004165 ORTHO05D005063 4.4e-90 336.3 808 32.4
vmacro12886 Vaccinium macrocarpon HOM05D004165 ORTHO05D005063 1.6e-87 327.8 802 31.7
Sabra05G0071000 Salix brachista HOM05D004165 ORTHO05D005063 7.7e-87 325.5 796 31.8
Actinidia28449 Actinidia chinensis HOM05D004165 ORTHO05D005063 1.0e-86 325.1 730 32.2
Manes.12G144600 Manihot esculenta HOM05D004165 ORTHO05D005063 8.6e-86 322.0 747 32.1
Potri.005G086100 Populus trichocarpa HOM05D004165 ORTHO05D005063 9.5e-85 318.5 792 31.4
Prupe.6G168600 Prunus persica HOM05D004165 ORTHO05D005063 2.8e-84 317.0 792 31.4
Oeu054941.1 Olea europaea HOM05D004165 ORTHO05D005063 3.5e-79 300.1 619 34.1
FAN23G0468 Fragaria x ananassa HOM05D004165 ORTHO05D005063 6.2e-76 289.3 805 29.7
FAN26G2965 Fragaria x ananassa HOM05D004165 ORTHO05D005063 6.2e-76 289.3 804 29.5
DCAR_016673 Daucus carota HOM05D004165 ORTHO05D005063 1.0e-75 288.5 795 29.7
FvH4_1g23050 Fragaria vesca HOM05D004165 ORTHO05D005063 1.0e-75 288.5 804 29.5
C01p00530 Brassica napus HOM05D004165 ORTHO05D005063 5.2e-75 286.2 734 30.2
FAN28G2110 Fragaria x ananassa HOM05D004165 ORTHO05D005063 6.8e-75 285.8 804 29.2
CARHR247290 Cardamine hirsuta HOM05D004165 ORTHO05D005063 4.4e-74 283.1 771 29.7
Lalb_Chr13g0296271 Lupinus albus HOM05D004165 ORTHO05D005063 4.4e-74 283.1 788 27.9
FAN19G2841 Fragaria x ananassa HOM05D004165 ORTHO05D005063 5.8e-74 282.7 804 29.1
BolC1t00056H Brassica oleracea HOM05D004165 ORTHO05D005063 7.5e-74 282.3 734 30.1
Thhalv10024179m.g Eutrema salsugineum HOM05D004165 ORTHO05D005063 2.2e-73 280.8 770 29.9
RcHm_v2.0_Chr2g0117761 Rosa chinensis HOM05D004165 ORTHO05D005063 3.7e-73 280.0 813 29.6
A01p00380 Brassica napus HOM05D004165 ORTHO05D005063 6.4e-73 279.3 728 30.1
Ca_17683_v3 Cicer arietinum L. HOM05D004165 ORTHO05D005063 8.3e-73 278.9 818 28.9
Sc03g0004750 Simmondsia chinensis HOM05D004165 ORTHO05D005063 1.9e-72 277.7 781 29.2
AL7G11450 Arabidopsis lyrata HOM05D004165 ORTHO05D005063 5.4e-72 276.2 773 28.7
arahy.Tifrunner.gnm1.ann1.F6TX6D Arachis hypogaea HOM05D004165 ORTHO05D005063 5.4e-72 276.2 778 29.6
Psat7g050200 Pisum sativum HOM05D004165 ORTHO05D005063 5.4e-72 276.2 806 28.8
BraA01t00046Z Brassica rapa HOM05D004165 ORTHO05D005063 1.6e-71 274.6 730 30.0
ATR1120G060 Amborella trichopoda HOM05D004165 ORTHO05D005063 2.7e-71 273.9 795 28.9
Aa31LG6G15850 Aethionema arabicum HOM05D004165 ORTHO05D005063 3.5e-71 273.5 780 29.0
Lj4g0014922 Lotus japonicus HOM05D004165 ORTHO05D005063 3.5e-71 273.5 802 27.3
AT4G39420 Arabidopsis thaliana HOM05D004165 ORTHO05D005063 6.0e-71 272.7 773 29.6
Sp7g36440 Schrenkiella parvula HOM05D004165 ORTHO05D005063 6.0e-71 272.7 775 28.6
TPR.G2248 Trifolium pratense HOM05D004165 ORTHO05D005063 7.8e-71 272.3 801 27.8
MD15G1330600 Malus domestica HOM05D004165 ORTHO05D005063 1.0e-70 271.9 809 27.9
Phvul.002G266300 Phaseolus vulgaris HOM05D004165 ORTHO05D005063 1.9e-69 267.7 782 28.9
Lsat_1_v5_gn_9_57180 Lactuca sativa HOM05D004165 ORTHO05D005063 3.3e-69 266.9 649 31.1
arahy.Tifrunner.gnm1.ann1.KAY7L7 Arachis hypogaea HOM05D004165 ORTHO05D005063 5.6e-69 266.2 777 29.1
VMungo0251G0498 Vigna mungo HOM05D004165 ORTHO05D005063 5.6e-69 266.2 773 29.0
Medtr8g092100 Medicago truncatula HOM05D004165 ORTHO05D005063 1.6e-68 264.6 791 27.3
Glyma.08G143200 Glycine max HOM05D004165 ORTHO05D005063 2.1e-68 264.2 811 28.2
THA.LOC104804480 Tarenaya hassleriana HOM05D004165 ORTHO05D005063 1.1e-67 261.9 768 28.3
CANSAT01G1143 Cannabis sativa HOM05D004165 ORTHO05D005063 1.4e-67 261.5 808 27.5
TPR.G2323 Trifolium pratense HOM05D004165 ORTHO05D005063 1.8e-67 261.2 809 27.3
Carub.0007s0134 Capsella rubella HOM05D004165 ORTHO05D005063 4.4e-66 256.5 769 27.7
SHI11781 Sapria himalayana HOM05D004165 ORTHO05D005063 1.1e-64 251.9 778 28.0
HanXRQChr08g0218061 Helianthus annuus HOM05D004165 ORTHO05D005063 1.4e-64 251.5 742 29.0
CAN.G1044.9 Capsicum annuum HOM05D004165 ORTHO05D005063 5.1e-62 243.0 781 27.1
Oeu054940.1 Olea europaea HOM05D004165 ORTHO05D005063 1.5e-61 241.5 522 32.4
MSTRG.23305 Avicennia marina HOM05D004165 ORTHO05D005063 1.6e-60 238.0 763 27.0
CsaV3_6G042210 Cucumis sativus L. HOM05D004165 ORTHO05D005063 2.8e-60 237.3 803 27.5
AUR62003622 Chenopodium quinoa HOM05D004165 ORTHO05D005063 6.2e-60 236.1 783 28.0
Cc07_g16560 Coffea canephora HOM05D004165 ORTHO05D005063 1.4e-59 235.0 825 27.8
PGR004G2408 Punica granatum HOM05D004165 ORTHO05D005063 4.0e-59 233.4 777 27.0
ClCG01G015940 Citrullus lanatus HOM05D004165 ORTHO05D005063 6.8e-59 232.6 810 27.2
MELO3C007461.2 Cucumis melo HOM05D004165 ORTHO05D005063 6.8e-59 232.6 798 27.1
Sed0015867 Sechium edule HOM05D004165 ORTHO05D005063 1.2e-58 231.9 813 26.8
Nitab4.5_0000184g0120 Nicotiana tabacum HOM05D004165 ORTHO05D005063 5.8e-58 229.6 783 25.2
Nitab4.5_0009050g0010 Nicotiana tabacum HOM05D004165 ORTHO05D005063 5.8e-58 229.6 783 25.4
SGA_v2.0_scaffold2G01283 Striga asiatica HOM05D004165 ORTHO05D005063 9.9e-58 228.8 764 25.9
AUR62017931 Chenopodium quinoa HOM05D004165 ORTHO05D005063 1.3e-57 228.4 806 27.0
EL10Ac6g15255 Beta vulgaris HOM05D004165 ORTHO05D005063 2.2e-57 227.6 792 26.5
Sopen04g022920 Solanum pennellii HOM05D004165 ORTHO05D005063 6.4e-57 226.1 791 25.3
Peaxi162Scf00702g00617 Petunia axillaris HOM05D004165 ORTHO05D005063 1.7e-54 218.0 789 26.2
SalBow6G1439 Salvia bowleyana HOM05D004165 ORTHO05D005063 5.1e-54 216.5 779 26.2
Migut.H02450 Erythranthe guttata HOM05D004165 ORTHO05D005063 7.3e-53 212.6 783 25.4
ECA233G2130 Erigeron canadensis HOM05D004165 ORTHO05D005063 3.8e-49 200.3 595 27.2
CDE07G1151 Ceratophyllum demersum HOM05D004165 ORTHO05D005063 8.7e-46 189.1 798 24.2
Zm00001eb062420 Zea mays HOM05D004165 ORTHO05D005063 5.3e-35 153.3 743 23.6
Glyma.05G185300 Glycine max HOM05D004165 ORTHO05D005063 7.1e-32 142.9 450 27.8
Os01g0182832 Oryza sativa ssp. japonica HOM05D004165 ORTHO05D005063 3.0e-30 137.5 621 23.3
HPP92_013326 Vanilla planifolia HOM05D004165 ORTHO05D005063 2.4e-27 127.9 774 21.7
Solyc04g051570.4 Solanum lycopersicum HOM05D004165 ORTHO05D005063 1.8e-22 111.7 119 46.2
SEGI_01323 Sequoiadendron giganteum HOM05D004165 ORTHO05D005063 1.6e-15 88.6 208 29.3
SEGI_28346 Sequoiadendron giganteum HOM05D004165 ORTHO05D005063 1.6e-15 88.6 208 29.3
Cpa.g.c46795 Carica papaya HOM05D004165 ORTHO05D005063 4.6e-15 87.0 54 79.6
Lsat_1_v5_gn_1_66781 Lactuca sativa HOM05D000921 ORTHO05D002852 5.3e-11 73.6 143 35.0
Lsat_1_v5_gn_3_81660 Lactuca sativa HOM05D000921 ORTHO05D002852 2.0e-10 71.6 60 55.0
Lsat_1_v5_gn_9_124480 Lactuca sativa HOM05D001159 ORTHO05D001712 1.3e-09 68.9 52 59.6
Pp3c10_13600 Physcomitrium patens HOM05D004165 ORTHO05D005063 2.2e-09 68.2 101 37.6
Pp3c3_30110 Physcomitrium patens HOM05D004165 ORTHO05D005063 9.4e-08 62.8 183 26.8
AagrBONN_evm.TU.Sc2ySwM_344.5500 Anthoceros agrestis HOM05D004165 ORTHO05D005063 1.6e-07 62.0 159 29.6
Pp3c7_14700 Physcomitrium patens HOM05D004165 ORTHO05D005063 8.8e-06 56.2 97 35.1


User provided reference genes

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