Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2751 Trochodendron aralioides HOM05D000375 ORTHO05D000240 1.3e-157 559.7 286 100.0
TAR636G1213 Trochodendron aralioides HOM05D000375 ORTHO05D000240 3.7e-59 232.6 271 55.0
Nn3g18854 Nelumbo nucifera HOM05D000375 ORTHO05D000240 3.4e-57 226.1 286 50.7
GSVIVG01038629001 Vitis vinifera HOM05D000375 ORTHO05D000240 8.7e-53 211.5 283 49.5
MBI12_g07777_MAGBIO Magnolia biondii HOM05D000375 ORTHO05D000240 5.5e-47 192.2 284 51.8
Nn1g00420 Nelumbo nucifera HOM05D042245 ORTHO05D000240 1.6e-46 190.7 289 46.7
Aqoxy7G00974 Aquilegia oxysepala HOM05D000375 ORTHO05D000240 1.0e-45 188.0 277 47.7
Cfa016174 Carpinus fangiana HOM05D000375 ORTHO05D000240 2.8e-43 179.9 281 46.3
Prupe.2G317500 Prunus persica HOM05D000375 ORTHO05D000240 2.0e-41 173.7 289 44.3
Haze_00280 Corylus avellana HOM05D000375 ORTHO05D000240 2.2e-40 170.2 278 45.3
Dinv35375 Davidia involucrata HOM05D000375 ORTHO05D000240 4.2e-39 166.0 287 43.9
Thecc.03G207100 Theobroma cacao HOM05D000375 ORTHO05D000240 2.1e-38 163.7 283 41.0
CiPaw.06G042100 Carya illinoinensis HOM05D000375 ORTHO05D000240 2.7e-38 163.3 284 43.7
QL09p007351 Quercus lobata HOM05D000375 ORTHO05D000240 2.7e-38 163.3 282 42.6
RcHm_v2.0_Chr1g0382681 Rosa chinensis HOM05D000375 ORTHO05D000240 2.0e-36 157.1 284 41.2
CANSAT21G1117 Cannabis sativa HOM05D000375 ORTHO05D000240 1.4e-34 151.0 285 43.5
ATR0579G065 Amborella trichopoda HOM05D000375 ORTHO05D000240 4.1e-34 149.4 285 41.8
Duzib084G0024 Durio zibethinus HOM05D000375 ORTHO05D000240 7.0e-34 148.7 284 42.3
Ciclev10019529m.g Citrus clementina HOM05D000375 ORTHO05D000240 3.8e-32 142.9 296 41.6
Actinidia22212 Actinidia chinensis HOM05D000375 ORTHO05D000240 5.0e-32 142.5 237 43.9
Potri.012G022600 Populus trichocarpa HOM05D000375 ORTHO05D000240 8.5e-32 141.7 278 40.3
FvH4_7g32780 Fragaria vesca HOM05D000375 ORTHO05D000240 1.1e-31 141.4 285 38.6
FAN03G1345 Fragaria x ananassa HOM05D000375 ORTHO05D000240 1.9e-31 140.6 285 37.9
FAN03G1521 Fragaria x ananassa HOM05D000375 ORTHO05D000240 1.9e-31 140.6 285 37.9
FAN03G2868 Fragaria x ananassa HOM05D000375 ORTHO05D000240 1.9e-31 140.6 285 37.9
MD07G1297800 Malus domestica HOM05D000375 ORTHO05D000240 5.5e-31 139.0 284 40.5
COL.COLO4_14355 Corchorus olitorius HOM05D000375 ORTHO05D000240 2.7e-30 136.7 289 39.1
Sabra12G0011200 Salix brachista HOM05D000375 ORTHO05D000240 6.1e-30 135.6 280 39.3
FAN01G1108 Fragaria x ananassa HOM05D000375 ORTHO05D000240 8.0e-30 135.2 285 36.8
Eucgr.A01418 Eucalyptus grandis HOM05D000375 ORTHO05D000240 1.3e-27 127.9 273 38.5
VMungo1309G0553 Vigna mungo HOM05D000375 ORTHO05D000240 1.7e-27 127.5 278 37.4
Gorai.008G265600 Gossypium raimondii HOM05D000375 ORTHO05D000240 4.8e-27 125.9 266 39.8
arahy.Tifrunner.gnm1.ann1.95DHJ9 Arachis hypogaea HOM05D000375 ORTHO05D000240 8.2e-27 125.2 287 38.0
TWI14G0388 Tripterygium wilfordii HOM05D000375 ORTHO05D000240 8.2e-27 125.2 280 35.7
Manes.01G041800 Manihot esculenta HOM05D000375 ORTHO05D000240 1.1e-26 124.8 238 41.2
Glyma.04G230600 Glycine max HOM05D000375 ORTHO05D000240 1.4e-26 124.4 276 37.3
Gohir.D12G247500 Gossypium hirsutum HOM05D000375 ORTHO05D000240 2.4e-26 123.6 266 39.5
Glyma.06G134600 Glycine max HOM05D000375 ORTHO05D000240 3.1e-26 123.2 276 35.9
FAN10G2746 Fragaria x ananassa HOM05D000375 ORTHO05D000240 9.1e-26 121.7 265 38.5
arahy.Tifrunner.gnm1.ann1.MSLW3U Arachis hypogaea HOM05D000375 ORTHO05D000240 1.6e-25 120.9 287 37.6
Gohir.A12G246800 Gossypium hirsutum HOM05D000375 ORTHO05D000240 1.6e-25 120.9 265 40.0
Cpa.g.sc3.145 Carica papaya HOM05D000375 ORTHO05D000240 2.2e-24 117.1 296 36.1
Lj1g0010685 Lotus japonicus HOM05D000375 ORTHO05D000240 2.9e-24 116.7 281 38.4
Duzib205G1587 Durio zibethinus HOM05D000375 ORTHO05D000240 3.8e-24 116.3 256 37.9
TWI39G0606 Tripterygium wilfordii HOM05D000375 ORTHO05D000240 5.0e-24 115.9 256 37.5
Oeu021659.1 Olea europaea HOM05D000375 ORTHO05D000240 8.5e-24 115.2 270 39.6
TWI23G0929 Tripterygium wilfordii HOM05D000375 ORTHO05D000240 1.5e-23 114.4 278 37.1
Lalb_Chr11g0067311 Lupinus albus HOM05D000375 ORTHO05D000240 9.4e-23 111.7 272 37.9
GSVIVG01019667001 Vitis vinifera HOM05D000375 ORTHO05D000240 3.6e-22 109.8 194 41.2
Potri.015G006200 Populus trichocarpa HOM05D000375 ORTHO05D000240 1.8e-21 107.5 258 36.8
Hma1.2p1_0094F.1_g047260 Hydrangea macrophylla HOM05D000375 ORTHO05D000240 5.2e-21 105.9 273 37.4
Prupe.5G131600 Prunus persica HOM05D000375 ORTHO05D000240 5.2e-21 105.9 222 37.4
Actinidia04172 Actinidia chinensis HOM05D000375 ORTHO05D000240 6.8e-21 105.5 164 40.9
Rhsim02G0253100 Rhododendron simsii HOM05D000375 ORTHO05D000240 8.8e-21 105.1 238 37.8
Dinv29221 Davidia involucrata HOM05D000375 ORTHO05D000240 2.0e-20 104.0 274 37.2
Lalb_Chr08g0239781 Lupinus albus HOM05D000375 ORTHO05D000240 2.6e-20 103.6 268 35.4
Sabra15G0004400 Salix brachista HOM05D000375 ORTHO05D000240 9.8e-20 101.7 250 36.8
Ca_16761_v3 Cicer arietinum L. HOM05D000375 ORTHO05D000240 6.3e-19 99.0 281 35.6
Lalb_Chr23g0271871 Lupinus albus HOM05D000375 ORTHO05D000240 1.4e-18 97.8 273 35.2
Medtr3g092330 Medicago truncatula HOM05D000375 ORTHO05D000240 2.4e-18 97.1 282 36.5
Hund09704 Selenicereus undatus HOM05D000375 ORTHO05D000240 2.4e-18 97.1 268 36.2
Oeu049604.1 Olea europaea HOM05D000375 ORTHO05D000240 1.6e-17 94.4 281 32.7
DCAR_020360 Daucus carota HOM05D000375 ORTHO05D000240 1.7e-16 90.9 279 32.6
Ciclev10019828m.g Citrus clementina HOM05D000375 ORTHO05D000240 5.0e-16 89.4 224 36.6
vmacro11496 Vaccinium macrocarpon HOM05D000375 ORTHO05D000240 6.5e-16 89.0 197 38.6
CSS0002551 Camellia sinensis var. sinensis HOM05D000375 ORTHO05D000240 8.5e-16 88.6 247 36.8
CSS0006470 Camellia sinensis var. sinensis HOM05D000375 ORTHO05D000240 1.5e-15 87.8 175 40.6
CSS0026567 Camellia sinensis var. sinensis HOM05D000375 ORTHO05D000240 1.5e-15 87.8 175 40.6
MD06G1121000 Malus domestica HOM05D000375 ORTHO05D000240 2.5e-15 87.0 227 37.4
FAN04G2198 Fragaria x ananassa HOM05D000375 ORTHO05D000240 5.5e-15 85.9 215 34.4
FAN08G2601 Fragaria x ananassa HOM05D000375 ORTHO05D000240 5.5e-15 85.9 215 34.0
Atru.chr12.2371 Acer truncatum HOM05D000375 ORTHO05D000240 9.5e-15 85.1 266 35.0
FAN13G2770 Fragaria x ananassa HOM05D000375 ORTHO05D000240 9.5e-15 85.1 215 34.0
RcHm_v2.0_Chr7g0187381 Rosa chinensis HOM05D000375 ORTHO05D000240 9.5e-15 85.1 215 34.0
FvH4_5g10750 Fragaria vesca HOM05D000375 ORTHO05D000240 2.1e-14 84.0 215 34.9
FAN18G1530 Fragaria x ananassa HOM05D000375 ORTHO05D000240 2.1e-14 84.0 215 34.9
Rhsim03G0214300 Rhododendron simsii HOM05D000375 ORTHO05D000240 4.7e-14 82.8 203 36.9
Nitab4.5_0006389g0010 Nicotiana tabacum HOM05D000375 ORTHO05D000240 4.0e-13 79.7 281 34.9
Oeu055177.1 Olea europaea HOM05D000375 ORTHO05D000240 8.8e-13 78.6 261 32.6
CAN.G303.7 Capsicum annuum HOM05D000375 ORTHO05D000240 1.5e-12 77.8 288 34.7
Cfa011910 Carpinus fangiana HOM05D000375 ORTHO05D000240 3.4e-12 76.6 188 35.6
MD14G1137600 Malus domestica HOM05D000375 ORTHO05D000240 4.4e-12 76.3 220 32.3
CiPaw.11G111100 Carya illinoinensis HOM05D000375 ORTHO05D000240 5.7e-12 75.9 225 35.6
PGR042G2639 Punica granatum HOM05D000375 ORTHO05D000240 5.7e-12 75.9 235 32.8
Lj2A155G28 Lonicera japonica HOM05D000375 ORTHO05D000240 7.5e-12 75.5 183 37.7
vmacro06429 Vaccinium macrocarpon HOM05D000375 ORTHO05D000240 1.3e-11 74.7 234 35.9
DCAR_008970 Daucus carota HOM05D000375 ORTHO05D000240 4.9e-11 72.8 282 30.1
Phvul.009G047000 Phaseolus vulgaris HOM05D000375 ORTHO05D000240 4.9e-11 72.8 274 29.9
Nitab4.5_0000319g0230 Nicotiana tabacum HOM05D000375 ORTHO05D000240 8.3e-11 72.0 281 34.2
MSTRG.26986 Avicennia marina HOM05D000375 ORTHO05D000240 1.1e-10 71.6 191 36.1
PGSC0003DMG400003220 Solanum tuberosum HOM05D000375 ORTHO05D000240 1.8e-10 70.9 280 32.5
Sopen03g022150 Solanum pennellii HOM05D000375 ORTHO05D000240 5.4e-10 69.3 281 32.4
Thecc.03G219200 Theobroma cacao HOM05D000375 ORTHO05D000240 7.0e-10 68.9 226 34.1
Solyc03g082430.1 Solanum lycopersicum HOM05D000375 ORTHO05D000240 1.2e-09 68.2 279 30.5
Cc02_g00930 Coffea canephora HOM05D000375 ORTHO05D000240 1.6e-09 67.8 284 29.9
Oeu037968.1 Olea europaea HOM05D000375 ORTHO05D025956 1.6e-09 67.8 264 34.5
Hund21045 Selenicereus undatus HOM05D000375 ORTHO05D000240 1.6e-09 67.8 267 30.7
Duzib205G0789 Durio zibethinus HOM05D000375 ORTHO05D000240 2.7e-09 67.0 212 34.4
Potri.001G082700 Populus trichocarpa HOM05D000375 ORTHO05D000240 2.7e-09 67.0 230 33.5
AUR62035608 Chenopodium quinoa HOM05D000375 ORTHO05D000240 3.5e-09 66.6 253 32.0
AUR62006018 Chenopodium quinoa HOM05D000375 ORTHO05D000240 5.9e-09 65.9 253 32.8
SalBow6G6588 Salvia bowleyana HOM05D000375 ORTHO05D000240 7.8e-09 65.5 280 29.3
SEGI_39841 Sequoiadendron giganteum HOM05D000375 ORTHO05D000240 7.8e-09 65.5 168 41.1
Ah.07g204830 Amaranthus hybridus HOM05D000375 ORTHO05D000240 1.0e-08 65.1 272 30.5
Dinv18748 Davidia involucrata HOM05D000375 ORTHO05D000240 1.0e-08 65.1 160 38.8
Actinidia08689 Actinidia chinensis HOM05D000375 ORTHO05D000240 1.7e-08 64.3 207 35.3
SEGI_28345 Sequoiadendron giganteum HOM05D000375 ORTHO05D000240 2.3e-08 63.9 216 37.5
SEGI_38542 Sequoiadendron giganteum HOM05D000375 ORTHO05D000240 2.3e-08 63.9 216 37.5
THA.LOC104799945 Tarenaya hassleriana HOM05D000375 ORTHO05D000240 2.3e-08 63.9 167 38.3
EL10Ac3g05196 Beta vulgaris HOM05D000375 ORTHO05D000240 3.8e-08 63.2 270 28.1
Psat5g073400 Pisum sativum HOM05D000375 ORTHO05D000240 3.8e-08 63.2 267 31.8
Haze_09188 Corylus avellana HOM05D000375 ORTHO05D000240 5.0e-08 62.8 183 31.7
Manes.05G190700 Manihot esculenta HOM05D000375 ORTHO05D000240 4.3e-07 59.7 143 35.0
Sabra01G0059400 Salix brachista HOM05D000375 ORTHO05D000240 5.6e-07 59.3 226 31.4
Oeu013369.1 Olea europaea HOM05D000375 ORTHO05D000240 7.3e-07 58.9 225 32.4
Oeu013370.1 Olea europaea HOM05D000375 ORTHO05D000240 7.3e-07 58.9 225 32.4
Peaxi162Scf00300g00828 Petunia axillaris HOM05D000375 ORTHO05D000240 9.5e-07 58.5 268 32.5
Duzib084G1440 Durio zibethinus HOM05D000375 ORTHO05D000240 1.2e-06 58.2 220 34.5
COL.COLO4_10813 Corchorus olitorius HOM05D000375 ORTHO05D000240 1.6e-06 57.8 230 32.2


User provided reference genes

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