Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.7e-225 785.8 424 100.0
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 2.8e-148 529.3 420 70.2
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 1.3e-132 477.2 422 63.5
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 3.5e-122 442.6 435 58.2
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 6.8e-110 401.7 428 55.4
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 6.3e-108 395.2 429 56.2
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 2.5e-104 383.3 421 54.2
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 3.3e-104 382.9 429 54.8
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 4.7e-103 379.0 423 53.7
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 8.0e-103 378.3 424 55.0
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.8e-102 377.1 419 56.6
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 8.9e-102 374.8 427 52.7
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 1.7e-97 360.5 424 51.2
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 4.7e-95 352.4 425 50.8
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 2.6e-93 346.7 427 50.1
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 5.8e-93 345.5 425 48.9
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 5.8e-93 345.5 425 49.4
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 9.8e-93 344.7 425 49.4
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 1.7e-92 344.0 425 49.9
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 4.9e-92 342.4 427 50.4
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 1.1e-91 341.3 423 49.4
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.1e-91 341.3 423 49.4
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 5.4e-91 339.0 422 49.3
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 9.2e-91 338.2 447 48.8
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 2.7e-90 336.7 448 47.5
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 1.2e-87 327.8 426 48.4
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 1.5e-85 320.9 443 48.8
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 3.4e-85 319.7 428 48.1
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 4.1e-83 312.8 441 47.6
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 5.4e-83 312.4 426 48.6
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 6.0e-82 308.9 425 49.6
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 1.7e-81 307.4 441 47.8
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 5.1e-81 305.8 441 47.8
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 1.9e-80 303.9 425 47.5
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 4.3e-80 302.8 424 46.9
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 2.1e-79 300.4 429 46.6
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 4.7e-79 299.3 422 46.9
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 1.1e-78 298.1 424 46.5
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 2.3e-78 297.0 424 46.2
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 3.1e-78 296.6 443 45.8
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 3.1e-78 296.6 422 47.6
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 6.8e-78 295.4 424 46.2
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 1.5e-77 294.3 444 46.6
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 4.4e-77 292.7 424 46.5
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 4.4e-77 292.7 424 46.0
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 1.7e-76 290.8 425 45.6
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 2.2e-76 290.4 426 45.8
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 4.1e-75 286.2 443 44.0
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 1.3e-73 281.2 436 42.9
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 8.6e-73 278.5 441 46.0
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 1.5e-72 277.7 443 43.6
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 5.6e-72 275.8 433 43.4
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 3.1e-70 270.0 447 44.3
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 2.0e-69 267.3 493 41.8
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 4.4e-69 266.2 438 41.8
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 2.9e-68 263.5 427 45.7
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 6.4e-68 262.3 476 40.1
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 1.4e-67 261.2 302 51.7
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 5.4e-67 259.2 320 51.9
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 4.6e-66 256.1 438 41.8
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 2.5e-64 250.4 422 44.1
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 3.3e-64 250.0 444 40.3
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 1.2e-63 248.1 431 41.3
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 1.6e-63 247.7 432 41.7
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 1.2e-61 241.5 457 40.5
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 3.8e-60 236.5 428 40.0
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 8.4e-60 235.3 434 40.8
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 5.4e-59 232.6 477 42.6
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 1.0e-57 228.4 477 41.9
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 6.6e-57 225.7 405 41.5
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 7.3e-56 222.2 435 39.1
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 1.3e-55 221.5 427 39.3
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 3.6e-55 219.9 405 41.2
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 4.8e-55 219.5 456 39.0
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 8.1e-55 218.8 426 39.7
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 1.1e-54 218.4 426 39.2
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 6.9e-54 215.7 409 39.1
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 6.9e-54 215.7 426 38.7
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 2.6e-53 213.8 424 38.4
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 4.5e-53 213.0 381 40.9
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 4.9e-52 209.5 413 39.5
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 3.5e-50 203.4 422 39.1
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 6.0e-50 202.6 420 37.6
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 8.1e-47 192.2 421 36.6
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 1.8e-46 191.0 388 41.0
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 6.9e-46 189.1 423 39.2
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 1.7e-44 184.5 421 36.3
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 4.9e-44 183.0 421 36.1
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 4.2e-43 179.9 456 36.4
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 3.0e-41 173.7 425 35.5
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 1.1e-40 171.8 422 36.0
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 1.6e-39 167.9 489 36.6
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 2.4e-38 164.1 390 35.9
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 4.9e-36 156.4 304 41.1
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 3.7e-31 140.2 423 33.1
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 9.0e-30 135.6 441 32.7
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 1.5e-29 134.8 341 38.4
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 6.7e-25 119.4 313 34.8
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 3.3e-24 117.1 345 33.9
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 3.1e-22 110.5 354 32.8
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 6.9e-22 109.4 407 28.7
GSVIVG01030006001 Vitis vinifera HOM05D006426 ORTHO05D007737 3.4e-21 107.1 162 43.8
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 4.5e-21 106.7 415 30.1
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 1.7e-20 104.8 349 33.0
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 5.0e-20 103.2 408 32.1
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 2.5e-19 100.9 265 37.7
Oeu029930.1 Olea europaea HOM05D006426 ORTHO05D007737 4.1e-14 83.6 157 36.9
Oeu035359.1 Olea europaea HOM05D006426 ORTHO05D007737 9.1e-14 82.4 157 36.9
Oeu003230.1 Olea europaea HOM05D006426 ORTHO05D007737 1.2e-13 82.0 157 36.9
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 1.7e-12 78.2 98 50.0
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 1.2e-10 72.0 383 28.7
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 1.6e-10 71.6 277 33.9
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 8.0e-10 69.3 353 29.5
HPP92_011117 Vanilla planifolia HOM05D006426 ORTHO05D007737 5.2e-09 66.6 454 26.4
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 5.7e-08 63.2 127 35.4
MBI18_g19827_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 9.7e-08 62.4 85 49.4
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 1.7e-07 61.6 262 33.2
SGA_v2.0_scaffold51G18895 Striga asiatica HOM05D001803 ORTHO05D001686 6.3e-07 59.7 146 38.4
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 3.1e-06 57.4 135 37.0


User provided reference genes

Program Settings