Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2635 Trochodendron aralioides HOM05D001551 ORTHO05D005859 1.2e-157 559.7 264 100.0
Thecc.03G141800 Theobroma cacao HOM05D001551 ORTHO05D005859 2.2e-143 512.3 260 89.6
TAR371G0091 Trochodendron aralioides HOM05D001551 ORTHO05D005859 1.9e-142 509.2 264 91.3
Manes.14G043800 Manihot esculenta HOM05D001551 ORTHO05D005859 1.5e-139 499.6 264 86.4
Phvul.009G160500 Phaseolus vulgaris HOM05D001551 ORTHO05D005859 9.6e-139 496.9 264 83.0
Lj1g0018460 Lotus japonicus HOM05D001551 ORTHO05D005859 1.6e-138 496.1 261 85.1
Glyma.04G202400 Glycine max HOM05D001551 ORTHO05D005859 3.7e-138 495.0 267 83.9
Atru.chr6.1937 Acer truncatum HOM05D001551 ORTHO05D005859 8.1e-138 493.8 264 85.2
Gohir.A11G038800 Gossypium hirsutum HOM05D001551 ORTHO05D005859 8.1e-138 493.8 260 86.2
Gohir.D11G042000 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.8e-137 492.7 260 85.8
Cpa.g.sc2215.3 Carica papaya HOM05D001551 ORTHO05D005859 2.4e-137 492.3 268 84.3
Potri.012G109800 Populus trichocarpa HOM05D001551 ORTHO05D005859 2.4e-137 492.3 258 86.0
PSO017G1738 Papaver somniferum HOM05D001551 ORTHO05D005859 3.1e-137 491.9 264 84.8
Glyma.06G163100 Glycine max HOM05D001551 ORTHO05D005859 4.0e-137 491.5 265 83.4
GSVIVG01008663001 Vitis vinifera HOM05D001551 ORTHO05D005859 5.3e-137 491.1 268 85.1
Hma1.2p1_0577F.1_g182180 Hydrangea macrophylla HOM05D001551 ORTHO05D005859 9.0e-137 490.3 256 89.5
TWI23G1313 Tripterygium wilfordii HOM05D001551 ORTHO05D005859 9.0e-137 490.3 271 84.9
Duzib205G1491 Durio zibethinus HOM05D001551 ORTHO05D005859 1.2e-136 490.0 260 85.8
Aqoxy5G03068 Aquilegia oxysepala HOM05D001551 ORTHO05D005859 1.5e-136 489.6 264 84.1
PSO478G5149 Papaver somniferum HOM05D001551 ORTHO05D005859 1.5e-136 489.6 264 84.5
Ca_10874_v3 Cicer arietinum L. HOM05D001551 ORTHO05D005859 2.6e-136 488.8 261 83.5
QL10p000300 Quercus lobata HOM05D001551 ORTHO05D005859 2.6e-136 488.8 253 86.6
Sabra12G0080000 Salix brachista HOM05D001551 ORTHO05D005859 3.4e-136 488.4 260 85.0
COL.COLO4_37269 Corchorus olitorius HOM05D001551 ORTHO05D005859 1.0e-135 486.9 262 83.2
Gohir.A03G055800 Gossypium hirsutum HOM05D001551 ORTHO05D005859 2.9e-135 485.3 264 84.1
Gorai.007G045200 Gossypium raimondii HOM05D001551 ORTHO05D005859 2.9e-135 485.3 261 85.1
Cfa018920 Carpinus fangiana HOM05D001551 ORTHO05D005859 9.3e-134 480.3 264 83.0
Cc04_g05770 Coffea canephora HOM05D001551 ORTHO05D005859 3.5e-133 478.4 260 84.2
Lj9C488G12 Lonicera japonica HOM05D001551 ORTHO05D005859 1.3e-132 476.5 266 82.3
Cfa018698 Carpinus fangiana HOM05D001551 ORTHO05D005859 1.8e-132 476.1 264 83.0
Manes.06G127400 Manihot esculenta HOM05D001551 ORTHO05D005859 1.8e-132 476.1 264 84.5
Lalb_Chr08g0237601 Lupinus albus HOM05D001551 ORTHO05D005859 2.3e-132 475.7 265 80.4
Medtr3g098510 Medicago truncatula HOM05D001551 ORTHO05D005859 2.3e-132 475.7 260 81.2
CSS0002484 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 3.0e-132 475.3 265 83.8
arahy.Tifrunner.gnm1.ann1.D8JD58 Arachis hypogaea HOM05D001551 ORTHO05D005859 3.9e-132 474.9 264 80.7
arahy.Tifrunner.gnm1.ann1.Q2CTBB Arachis hypogaea HOM05D001551 ORTHO05D005859 3.9e-132 474.9 264 80.7
Gorai.003G117100 Gossypium raimondii HOM05D001551 ORTHO05D005859 5.1e-132 474.6 263 82.9
CSS0038575 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 6.7e-132 474.2 268 83.2
Prupe.5G140300 Prunus persica HOM05D001551 ORTHO05D005859 1.5e-131 473.0 263 82.1
MD14G1145900 Malus domestica HOM05D001551 ORTHO05D005859 4.3e-131 471.5 263 81.7
RcHm_v2.0_Chr7g0188531 Rosa chinensis HOM05D001551 ORTHO05D005859 7.4e-131 470.7 260 81.9
MD06G1129000 Malus domestica HOM05D001551 ORTHO05D005859 9.6e-131 470.3 263 81.4
Rhsim12G0181300 Rhododendron simsii HOM05D001551 ORTHO05D005859 1.6e-130 469.5 269 81.8
Ciclev10032408m.g Citrus clementina HOM05D001551 ORTHO05D005859 6.2e-130 467.6 271 80.8
MELO3C002387.2 Cucumis melo HOM05D001551 ORTHO05D005859 8.2e-130 467.2 267 80.5
Lsat_1_v5_gn_5_9381 Lactuca sativa HOM05D001551 ORTHO05D005859 1.8e-129 466.1 265 81.9
MSTRG.22814 Avicennia marina HOM05D001551 ORTHO05D005859 2.4e-129 465.7 266 81.6
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 2.4e-129 465.7 257 83.3
CsaV3_1G009930 Cucumis sativus L. HOM05D001551 ORTHO05D005859 3.1e-129 465.3 267 80.1
Solyc06g068760.3 Solanum lycopersicum HOM05D001551 ORTHO05D005859 3.1e-129 465.3 259 81.9
CiPaw.12G000400 Carya illinoinensis HOM05D001551 ORTHO05D005859 9.0e-129 463.8 253 82.6
BraA01t01589Z Brassica rapa HOM05D001551 ORTHO05D005859 2.0e-128 462.6 272 79.0
A01p16340 Brassica napus HOM05D001551 ORTHO05D005859 5.8e-128 461.1 272 78.7
SalBow7G1162 Salvia bowleyana HOM05D001551 ORTHO05D005859 5.8e-128 461.1 262 81.3
Sopen06g026040 Solanum pennellii HOM05D001551 ORTHO05D005859 7.6e-128 460.7 260 81.5
C01p20490 Brassica napus HOM05D001551 ORTHO05D005859 1.3e-127 459.9 272 78.3
BcaC09g50811 Brassica carinata HOM05D001551 ORTHO05D005859 1.7e-127 459.5 271 78.2
BcaNung03998 Brassica carinata HOM05D001551 ORTHO05D005859 2.2e-127 459.1 272 78.3
Psat5g055440 Pisum sativum HOM05D001551 ORTHO05D005859 2.2e-127 459.1 261 78.2
FAN04G0171 Fragaria x ananassa HOM05D001551 ORTHO05D005859 2.9e-127 458.8 271 78.6
PGSC0003DMG400025575 Solanum tuberosum HOM05D001551 ORTHO05D005859 3.8e-127 458.4 260 81.2
FvH4_5g09710 Fragaria vesca HOM05D001551 ORTHO05D005859 6.5e-127 457.6 271 78.2
FAN08G3006 Fragaria x ananassa HOM05D001551 ORTHO05D005859 8.4e-127 457.2 257 80.9
vmacro16761 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 8.4e-127 457.2 274 81.0
Actinidia36846 Actinidia chinensis HOM05D001551 ORTHO05D005859 1.4e-126 456.4 268 80.2
BolC1t01980H Brassica oleracea HOM05D001551 ORTHO05D005859 3.2e-126 455.3 272 77.9
FAN18G2118 Fragaria x ananassa HOM05D001551 ORTHO05D005859 3.2e-126 455.3 271 77.9
HanXRQChr05g0155371 Helianthus annuus HOM05D001551 ORTHO05D005859 3.2e-126 455.3 263 80.6
FAN13G0525 Fragaria x ananassa HOM05D001551 ORTHO05D005859 5.5e-126 454.5 257 80.5
Migut.I00664 Erythranthe guttata HOM05D001551 ORTHO05D005859 7.2e-126 454.1 258 81.4
CAN.G1089.16 Capsicum annuum HOM05D001551 ORTHO05D005859 2.7e-125 452.2 275 77.5
CDE02G1325 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 3.5e-125 451.8 261 80.1
Actinidia08913 Actinidia chinensis HOM05D001551 ORTHO05D005859 4.6e-125 451.4 270 78.1
Sc04g0000180 Simmondsia chinensis HOM05D001551 ORTHO05D005859 4.6e-125 451.4 277 76.2
Eucgr.K02189 Eucalyptus grandis HOM05D001551 ORTHO05D005859 6.1e-125 451.1 265 78.1
AT5G51020 Arabidopsis thaliana HOM05D001551 ORTHO05D005859 2.3e-124 449.1 260 79.6
EL10Ac5g11272 Beta vulgaris HOM05D001551 ORTHO05D005859 2.3e-124 449.1 267 77.9
Sed0027340 Sechium edule HOM05D001551 ORTHO05D005859 2.3e-124 449.1 256 79.7
Nitab4.5_0007345g0100 Nicotiana tabacum HOM05D001551 ORTHO05D005859 3.0e-124 448.7 260 80.4
PGR044G0460 Punica granatum HOM05D001551 ORTHO05D005859 3.0e-124 448.7 262 79.0
THA.LOC104808046 Tarenaya hassleriana HOM05D001551 ORTHO05D005859 3.9e-124 448.4 256 80.5
AL8G25230 Arabidopsis lyrata HOM05D001551 ORTHO05D005859 6.7e-124 447.6 260 79.2
Nitab4.5_0012775g0030 Nicotiana tabacum HOM05D001551 ORTHO05D005859 1.1e-123 446.8 260 80.0
Aa31LG3G7480 Aethionema arabicum HOM05D001551 ORTHO05D005859 1.9e-123 446.0 267 77.2
Gohir.D03G110700 Gossypium hirsutum HOM05D001551 ORTHO05D005859 4.3e-123 444.9 236 85.6
Hund10026 Selenicereus undatus HOM05D001551 ORTHO05D005859 7.4e-123 444.1 256 77.7
Rhsim08G0198700 Rhododendron simsii HOM05D001551 ORTHO05D005859 9.7e-123 443.7 250 81.6
CARHR257170 Cardamine hirsuta HOM05D001551 ORTHO05D005859 1.3e-122 443.4 260 78.8
Sp6g13170 Schrenkiella parvula HOM05D001551 ORTHO05D005859 2.8e-122 442.2 267 76.4
BraA03t10931Z Brassica rapa HOM05D001551 ORTHO05D005859 6.3e-122 441.0 266 75.9
Carub.0008s1102 Capsella rubella HOM05D001551 ORTHO05D005859 1.8e-121 439.5 260 77.3
unitig_27.g25103 Utricularia gibba HOM05D001551 ORTHO05D005859 2.0e-120 436.0 266 76.3
Sp7g23070 Schrenkiella parvula HOM05D001551 ORTHO05D005859 7.7e-120 434.1 272 74.6
AUR62043378 Chenopodium quinoa HOM05D001551 ORTHO05D005859 1.3e-119 433.3 282 71.6
TWI39G0428 Tripterygium wilfordii HOM05D001551 ORTHO05D005859 1.3e-119 433.3 259 79.2
AUR62032208 Chenopodium quinoa HOM05D001551 ORTHO05D005859 6.5e-119 431.0 280 72.1
Oeu051186.2 Olea europaea HOM05D001551 ORTHO05D005859 1.9e-118 429.5 279 72.4
SGA_v2.0_scaffold5G02806 Striga asiatica HOM05D001551 ORTHO05D005859 6.1e-117 424.5 264 75.8
vmacro19115 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 6.1e-117 424.5 250 77.6
A03p16410 Brassica napus HOM05D001551 ORTHO05D005859 1.8e-116 422.9 291 68.7
Sed0019000 Sechium edule HOM05D001551 ORTHO05D005859 2.3e-116 422.5 256 76.6
THA.LOC104811554 Tarenaya hassleriana HOM05D001551 ORTHO05D005859 1.1e-115 420.2 242 78.1
MBI07_g13940_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 4.3e-115 418.3 297 70.0
DCAR_025640 Daucus carota HOM05D001551 ORTHO05D005859 1.3e-114 416.8 264 74.2
Os11g0524300 Oryza sativa ssp. japonica HOM05D001551 ORTHO05D005859 3.7e-114 415.2 231 78.8
Peaxi162Scf00207g00254 Petunia axillaris HOM05D001551 ORTHO05D005859 3.1e-113 412.1 260 76.5
BcaC01g06112 Brassica carinata HOM05D001551 ORTHO05D005859 5.3e-113 411.4 270 73.0
ClCG03G004050 Citrullus lanatus HOM05D001551 ORTHO05D005859 6.5e-111 404.4 235 78.7
Dinv13710 Davidia involucrata HOM05D001551 ORTHO05D005859 1.1e-110 403.7 210 87.6
Zm00001eb170550 Zea mays HOM05D001551 ORTHO05D005859 4.2e-110 401.7 231 75.8
Actinidia18288 Actinidia chinensis HOM05D001551 ORTHO05D005859 1.6e-109 399.8 235 79.6
SGA_v2.0_scaffold37G14673 Striga asiatica HOM05D001551 ORTHO05D005859 2.1e-109 399.4 219 83.6
Nn4g22121 Nelumbo nucifera HOM05D001551 ORTHO05D005859 4.8e-106 388.3 264 70.8
Thhalv10014437m.g Eutrema salsugineum HOM05D001551 ORTHO05D005859 1.1e-105 387.1 227 78.9
Mapoly0002s0145 Marchantia polymorpha HOM05D001551 ORTHO05D005859 5.3e-105 384.8 242 70.7
AagrBONN_evm.TU.Sc2ySwM_368.1985 Anthoceros agrestis HOM05D001551 ORTHO05D005859 9.1e-105 384.0 238 69.7
Pp3c6_23000 Physcomitrium patens HOM05D001551 ORTHO05D005859 9.4e-102 374.0 218 73.9
Pp3c5_10130 Physcomitrium patens HOM05D001551 ORTHO05D005859 1.6e-101 373.2 234 69.2
TPR.G16934 Trifolium pratense HOM05D001551 ORTHO05D005859 1.5e-99 366.7 193 83.4
SMO118G0459 Selaginella moellendorffii HOM05D001551 ORTHO05D005859 3.3e-99 365.5 217 71.9
Actinidia25511 Actinidia chinensis HOM05D001551 ORTHO05D005859 6.3e-98 361.3 250 70.0
AUR62011939 Chenopodium quinoa HOM05D001551 ORTHO05D005859 8.2e-98 360.9 299 61.2
Haze_07088 Corylus avellana HOM05D001551 ORTHO05D005859 3.2e-94 349.0 231 70.6
Nn3g16260 Nelumbo nucifera HOM05D001551 ORTHO05D005859 6.8e-92 341.3 164 92.7
Hund02515 Selenicereus undatus HOM05D001551 ORTHO05D005859 1.5e-91 340.1 290 60.0
AUR62043863 Chenopodium quinoa HOM05D001551 ORTHO05D005859 5.7e-91 338.2 329 53.2
Dinv23235 Davidia involucrata HOM05D001551 ORTHO05D005859 4.2e-86 322.0 181 84.0
SEGI_34423 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 5.2e-84 315.1 198 68.7
CBR_g30803 Chara braunii HOM05D001551 ORTHO05D005859 5.7e-83 311.6 215 60.5
Duzib084G0881 Durio zibethinus HOM05D001551 ORTHO05D005859 1.7e-82 310.1 162 85.2
Thhalv10025970m.g Eutrema salsugineum HOM05D001551 ORTHO05D005859 2.3e-71 273.1 157 80.9
MBI07_g35983_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 5.6e-70 268.5 163 77.3
CDE06G0746 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 2.2e-66 256.5 215 63.3
MBI07_g48061_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 4.1e-65 252.3 138 81.9
HPP92_009738 Vanilla planifolia HOM05D001551 ORTHO05D005859 5.6e-62 241.9 199 60.8
Sc04g0000140 Simmondsia chinensis HOM05D001551 ORTHO05D005859 1.9e-54 216.9 122 81.1
Sc04g0000130 Simmondsia chinensis HOM05D001551 ORTHO05D005859 1.8e-52 210.3 120 78.3
CSS0038626 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 5.6e-38 162.2 105 77.1
CSS0016811 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 1.2e-27 127.9 82 75.6
FvH4_6g04500 Fragaria vesca HOM05D001551 ORTHO05D005859 1.7e-26 124.0 72 77.8
SEGI_13041 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 4.9e-26 122.5 68 72.1
Psat3g122800 Pisum sativum HOM05D001551 ORTHO05D005859 1.1e-25 121.3 81 67.9
ECA246G1749 Erigeron canadensis HOM05D001551 ORTHO05D005859 9.3e-25 118.2 66 81.8
Pp3c16_270 Physcomitrium patens HOM05D001551 ORTHO05D005859 6.7e-23 112.1 65 73.8
Psat7g261640 Pisum sativum HOM05D001551 ORTHO05D005859 1.6e-21 107.5 91 59.3
Cfa013473 Carpinus fangiana HOM05D001551 ORTHO05D005859 2.0e-19 100.5 71 73.2
HanXRQChr05g0130591 Helianthus annuus HOM05D001551 ORTHO05D005859 2.6e-19 100.1 52 84.6
Sabra15G0128500 Salix brachista HOM05D001551 ORTHO05D003058 8.4e-18 95.1 84 54.8
BcaC01g06064 Brassica carinata HOM05D001551 ORTHO05D005859 2.7e-16 90.1 86 58.1
C03p19300 Brassica napus HOM05D001551 ORTHO05D042173 3.0e-15 86.7 176 33.0
Duzib084G0670 Durio zibethinus HOM05D001551 ORTHO05D005859 3.3e-14 83.2 56 73.2
Ah.02g114530 Amaranthus hybridus HOM05D001551 ORTHO05D005859 1.5e-11 74.3 96 41.7
Ah.11g046990 Amaranthus hybridus HOM05D001551 ORTHO05D005859 1.5e-11 74.3 56 62.5
Psat5g306440 Pisum sativum HOM05D001551 ORTHO05D006558 1.5e-11 74.3 52 67.3
SEGI_34327 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 2.5e-09 67.0 67 50.7
BolC3t14316H Brassica oleracea HOM05D001551 ORTHO05D042173 3.2e-09 66.6 160 31.2


User provided reference genes

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