Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2520 Trochodendron aralioides HOM05D003867 ORTHO05D004593 1.9e-118 429.1 204 100.0
TAR374G1237 Trochodendron aralioides HOM05D003867 ORTHO05D004593 1.2e-117 426.4 203 99.0
CiPaw.05G113400 Carya illinoinensis HOM05D003867 ORTHO05D004593 6.1e-117 424.1 203 98.0
Dinv39063 Davidia involucrata HOM05D003867 ORTHO05D004593 6.1e-117 424.1 203 98.5
Duzib248G0225 Durio zibethinus HOM05D003867 ORTHO05D004593 1.4e-116 422.9 203 98.0
Duzib268G1394 Durio zibethinus HOM05D003867 ORTHO05D004593 1.4e-116 422.9 203 97.5
Gohir.A12G147700 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.4e-116 422.9 203 98.0
Gorai.008G164400 Gossypium raimondii HOM05D003867 ORTHO05D004593 1.4e-116 422.9 203 98.0
Nn3g16522 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.4e-116 422.9 203 98.0
CANSAT64G1093 Cannabis sativa HOM05D003867 ORTHO05D004593 1.8e-116 422.5 203 98.0
Gohir.D12G152000 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.8e-116 422.5 203 97.5
CSS0021164 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 2.3e-116 422.2 203 98.0
CiPaw.06G100100 Carya illinoinensis HOM05D003867 ORTHO05D004593 3.0e-116 421.8 203 97.0
Nn4g22382 Nelumbo nucifera HOM05D003867 ORTHO05D004593 3.0e-116 421.8 203 98.0
ClCG02G006860 Citrullus lanatus HOM05D003867 ORTHO05D004593 4.0e-116 421.4 203 98.0
COL.COLO4_12823 Corchorus olitorius HOM05D003867 ORTHO05D004593 4.0e-116 421.4 203 97.0
Gorai.001G109800 Gossypium raimondii HOM05D003867 ORTHO05D004593 4.0e-116 421.4 203 97.5
PGR119G1061 Punica granatum HOM05D003867 ORTHO05D004593 4.0e-116 421.4 203 97.5
TWI36G0688 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 4.0e-116 421.4 203 97.5
CSS0008021 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 5.2e-116 421.0 203 97.5
MBI11_g06772_MAGBIO Magnolia biondii HOM05D003867 ORTHO05D004593 5.2e-116 421.0 203 97.0
Medtr1g042300 Medicago truncatula HOM05D003867 ORTHO05D004593 5.2e-116 421.0 203 97.5
Rhsim12G0103900 Rhododendron simsii HOM05D003867 ORTHO05D004593 5.2e-116 421.0 203 98.0
Rhsim12G0153900 Rhododendron simsii HOM05D003867 ORTHO05D004593 5.2e-116 421.0 203 98.0
Hund06074 Selenicereus undatus HOM05D003867 ORTHO05D004593 5.2e-116 421.0 203 98.0
TWI75G1178 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 5.2e-116 421.0 203 97.5
MELO3C009702.2 Cucumis melo HOM05D003867 ORTHO05D004593 6.8e-116 420.6 203 97.5
CsaV3_3G039600 Cucumis sativus L. HOM05D003867 ORTHO05D004593 6.8e-116 420.6 203 97.5
Sed0026140 Sechium edule HOM05D003867 ORTHO05D004593 6.8e-116 420.6 203 97.0
EL10Ac6g13463 Beta vulgaris HOM05D003867 ORTHO05D004593 8.8e-116 420.2 203 97.5
CDE09G0709 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 8.8e-116 420.2 203 97.0
Ca_12000_v3 Cicer arietinum L. HOM05D003867 ORTHO05D004593 8.8e-116 420.2 203 97.0
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea HOM05D003867 ORTHO05D004593 1.2e-115 419.9 203 97.0
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea HOM05D003867 ORTHO05D004593 1.2e-115 419.9 203 97.0
Manes.12G014300 Manihot esculenta HOM05D003867 ORTHO05D004593 1.2e-115 419.9 203 96.6
RcHm_v2.0_Chr4g0430891 Rosa chinensis HOM05D003867 ORTHO05D004593 1.2e-115 419.9 203 97.0
Zm00001eb329270 Zea mays HOM05D003867 ORTHO05D004593 1.2e-115 419.9 203 97.0
FvH4_4g24110 Fragaria vesca HOM05D003867 ORTHO05D004593 1.5e-115 419.5 203 97.0
FAN07G1251 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.5e-115 419.5 203 97.0
FAN12G0392 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.5e-115 419.5 203 97.0
FAN17G1814 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.5e-115 419.5 203 97.0
Gohir.D07G101900 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.5e-115 419.5 203 97.0
QL03p054504 Quercus lobata HOM05D003867 ORTHO05D004593 1.5e-115 419.5 203 96.6
vmacro15114 Vaccinium macrocarpon HOM05D003867 ORTHO05D004593 1.5e-115 419.5 203 96.6
Duzib251G0884 Durio zibethinus HOM05D003867 ORTHO05D004593 2.0e-115 419.1 203 97.0
Prupe.1G231900 Prunus persica HOM05D003867 ORTHO05D004593 2.0e-115 419.1 203 96.1
Hund25446 Selenicereus undatus HOM05D003867 ORTHO05D004593 2.0e-115 419.1 203 97.5
Thecc.02G275800 Theobroma cacao HOM05D003867 ORTHO05D004593 2.0e-115 419.1 202 97.5
TPR.G25178 Trifolium pratense HOM05D003867 ORTHO05D004593 2.0e-115 419.1 203 96.6
Migut.E00031 Erythranthe guttata HOM05D003867 ORTHO05D004593 3.4e-115 418.3 203 96.6
unitig_21.g20878 Utricularia gibba HOM05D003867 ORTHO05D004593 3.4e-115 418.3 203 96.6
Cc11_g16710 Coffea canephora HOM05D003867 ORTHO05D004593 4.4e-115 417.9 203 96.6
Haze_12379 Corylus avellana HOM05D003867 ORTHO05D004593 4.4e-115 417.9 203 97.0
FAN22G0799 Fragaria x ananassa HOM05D003867 ORTHO05D004593 4.4e-115 417.9 203 96.6
PSO063G4816 Papaver somniferum HOM05D003867 ORTHO05D004593 4.4e-115 417.9 203 96.6
PSO782G1516 Papaver somniferum HOM05D003867 ORTHO05D004593 4.4e-115 417.9 203 96.6
unitig_744.g24299 Utricularia gibba HOM05D003867 ORTHO05D004593 4.4e-115 417.9 203 97.0
Gohir.A07G097600 Gossypium hirsutum HOM05D003867 ORTHO05D004593 5.7e-115 417.5 203 97.0
VMungo0720G1468 Vigna mungo HOM05D003867 ORTHO05D004593 5.7e-115 417.5 203 96.6
C03p04400 Brassica napus HOM05D003867 ORTHO05D004593 7.5e-115 417.2 203 96.6
BraA03t09737Z Brassica rapa HOM05D003867 ORTHO05D004593 7.5e-115 417.2 203 96.6
CARHR204460 Cardamine hirsuta HOM05D003867 ORTHO05D004593 7.5e-115 417.2 203 96.6
HanXRQChr09g0255191 Helianthus annuus HOM05D003867 ORTHO05D004593 7.5e-115 417.2 203 96.6
HanXRQChr15g0486841 Helianthus annuus HOM05D003867 ORTHO05D004593 7.5e-115 417.2 203 96.1
Lsat_1_v5_gn_4_184020 Lactuca sativa HOM05D003867 ORTHO05D004593 7.5e-115 417.2 203 96.1
Lj6g0022289 Lotus japonicus HOM05D003867 ORTHO05D004593 7.5e-115 417.2 203 96.6
Potri.010G057400 Populus trichocarpa HOM05D003867 ORTHO05D004593 7.5e-115 417.2 203 95.6
THA.LOC104819362 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 7.5e-115 417.2 203 96.6
AUR62005586 Chenopodium quinoa HOM05D003867 ORTHO05D004593 9.8e-115 416.8 203 96.1
AUR62024144 Chenopodium quinoa HOM05D003867 ORTHO05D004593 9.8e-115 416.8 203 96.1
Thhalv10013394m.g Eutrema salsugineum HOM05D003867 ORTHO05D004593 9.8e-115 416.8 203 96.6
MD13G1115400 Malus domestica HOM05D003867 ORTHO05D004593 9.8e-115 416.8 203 96.6
MD16G1115300 Malus domestica HOM05D003867 ORTHO05D004593 9.8e-115 416.8 203 96.6
Psat6g040120 Pisum sativum HOM05D003867 ORTHO05D004593 9.8e-115 416.8 203 96.6
Actinidia08082 Actinidia chinensis HOM05D003867 ORTHO05D004593 1.3e-114 416.4 203 96.6
Aa31LG3G18010 Aethionema arabicum HOM05D003867 ORTHO05D004593 1.3e-114 416.4 203 96.6
ATR0665G595 Amborella trichopoda HOM05D003867 ORTHO05D004593 1.7e-114 416.0 203 96.1
THA.LOC104818400 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 1.7e-114 416.0 203 96.1
Os07g0645400 Oryza sativa ssp. japonica HOM05D003867 ORTHO05D004593 2.2e-114 415.6 203 96.6
Phvul.007G274700 Phaseolus vulgaris HOM05D003867 ORTHO05D004593 2.2e-114 415.6 203 96.6
AL6G19230 Arabidopsis lyrata HOM05D003867 ORTHO05D004593 2.8e-114 415.2 203 96.1
BcaB01g05588 Brassica carinata HOM05D003867 ORTHO05D004593 2.8e-114 415.2 203 96.1
BcaB08g37249 Brassica carinata HOM05D003867 ORTHO05D004593 2.8e-114 415.2 203 96.1
A03p03890 Brassica napus HOM05D003867 ORTHO05D004593 2.8e-114 415.2 203 96.1
A10p28200 Brassica napus HOM05D003867 ORTHO05D004593 2.8e-114 415.2 203 96.1
C09p68410 Brassica napus HOM05D003867 ORTHO05D004593 2.8e-114 415.2 203 96.1
BolC9t59588H Brassica oleracea HOM05D003867 ORTHO05D004593 2.8e-114 415.2 203 96.1
BraA10t44869Z Brassica rapa HOM05D003867 ORTHO05D004593 2.8e-114 415.2 203 96.1
Carub.0006s0748 Capsella rubella HOM05D003867 ORTHO05D004593 2.8e-114 415.2 203 96.1
Cpa.g.sc257.6 Carica papaya HOM05D003867 ORTHO05D004593 2.8e-114 415.2 203 95.6
Glyma.10G005500 Glycine max HOM05D003867 ORTHO05D004593 2.8e-114 415.2 203 96.1
Oeu020305.1 Olea europaea HOM05D003867 ORTHO05D004593 2.8e-114 415.2 203 96.1
Sp6g34370 Schrenkiella parvula HOM05D003867 ORTHO05D004593 2.8e-114 415.2 203 96.1
Zm00001eb110430 Zea mays HOM05D003867 ORTHO05D004593 2.8e-114 415.2 203 96.1
MSTRG.7988 Avicennia marina HOM05D003867 ORTHO05D004593 3.7e-114 414.8 203 95.6
Aqoxy3G01483 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 4.9e-114 414.5 203 96.1
DCAR_007011 Daucus carota HOM05D003867 ORTHO05D004593 4.9e-114 414.5 203 95.6
ECA232G3717 Erigeron canadensis HOM05D003867 ORTHO05D004593 4.9e-114 414.5 203 96.1
Glyma.02G003300 Glycine max HOM05D003867 ORTHO05D004593 4.9e-114 414.5 203 96.1
Lalb_Chr03g0037281 Lupinus albus HOM05D003867 ORTHO05D004593 4.9e-114 414.5 203 95.6
Sabra10G0047900 Salix brachista HOM05D003867 ORTHO05D004593 4.9e-114 414.5 203 95.6
Sc04g0010000 Simmondsia chinensis HOM05D003867 ORTHO05D004593 4.9e-114 414.5 203 95.6
Ah.03g133960 Amaranthus hybridus HOM05D003867 ORTHO05D004593 6.3e-114 414.1 203 95.1
BolC3t12971H Brassica oleracea HOM05D003867 ORTHO05D004593 6.3e-114 414.1 203 95.6
Peaxi162Scf00128g01017 Petunia axillaris HOM05D003867 ORTHO05D004593 6.3e-114 414.1 203 95.6
AT5G08530 Arabidopsis thaliana HOM05D003867 ORTHO05D004593 8.3e-114 413.7 203 95.6
Eucgr.H04659 Eucalyptus grandis HOM05D003867 ORTHO05D004593 8.3e-114 413.7 203 95.1
ATR0564G372 Amborella trichopoda HOM05D003867 ORTHO05D004593 1.1e-113 413.3 203 96.1
Ciclev10033600m.g Citrus clementina HOM05D003867 ORTHO05D004593 1.4e-113 412.9 203 95.6
Lalb_Chr01g0021001 Lupinus albus HOM05D003867 ORTHO05D004593 1.4e-113 412.9 203 95.6
Oeu019042.1 Olea europaea HOM05D003867 ORTHO05D004593 3.1e-113 411.8 203 95.6
SGA_v2.0_scaffold1484G53963 Striga asiatica HOM05D003867 ORTHO05D004593 4.1e-113 411.4 203 94.6
CAN.G206.61 Capsicum annuum HOM05D003867 ORTHO05D004593 5.4e-113 411.0 203 94.6
DCAR_031187 Daucus carota HOM05D003867 ORTHO05D004593 5.4e-113 411.0 203 94.6
Nitab4.5_0000271g0190 Nicotiana tabacum HOM05D003867 ORTHO05D004593 5.4e-113 411.0 203 94.6
Solyc02g087240.4 Solanum lycopersicum HOM05D003867 ORTHO05D004593 5.4e-113 411.0 203 94.1
Sopen02g031980 Solanum pennellii HOM05D003867 ORTHO05D004593 5.4e-113 411.0 203 94.1
Peaxi162Scf00449g00825 Petunia axillaris HOM05D003867 ORTHO05D004593 9.1e-113 410.2 203 94.1
SGA_v2.0_scaffold347G49568 Striga asiatica HOM05D003867 ORTHO05D004593 9.1e-113 410.2 203 94.1
SGA_v2.0_scaffold63G21760 Striga asiatica HOM05D003867 ORTHO05D004593 9.1e-113 410.2 203 94.1
PGSC0003DMG400001292 Solanum tuberosum HOM05D003867 ORTHO05D004593 2.7e-112 408.7 203 93.6
Pp3c12_4050 Physcomitrium patens HOM05D003867 ORTHO05D004593 4.5e-112 407.9 202 95.0
CBR_g4558 Chara braunii HOM05D003867 ORTHO05D004593 1.3e-111 406.4 201 94.5
HanXRQChr15g0475281 Helianthus annuus HOM05D003867 ORTHO05D004593 1.5e-110 402.9 202 92.1
SEGI_02035 Sequoiadendron giganteum HOM05D003867 ORTHO05D004593 1.5e-110 402.9 203 93.6
SMO141G0212 Selaginella moellendorffii HOM05D003867 ORTHO05D004593 1.9e-110 402.5 203 92.1
Pp3c4_17990 Physcomitrium patens HOM05D003867 ORTHO05D004593 2.5e-110 402.1 202 93.6
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis HOM05D003867 ORTHO05D004593 3.6e-109 398.3 203 90.6
Mapoly0052s0094 Marchantia polymorpha HOM05D003867 ORTHO05D004593 4.0e-108 394.8 203 90.6
Lsat_1_v5_gn_0_47760 Lactuca sativa HOM05D003867 ORTHO05D004593 6.8e-108 394.0 202 90.1
MCO16G634 Micromonas commoda HOM05D003867 ORTHO05D004593 4.6e-104 381.3 202 88.1
CDE02G4050 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 1.6e-101 372.9 200 88.0
Dinv37748 Davidia involucrata HOM05D003867 ORTHO05D004593 3.6e-101 371.7 180 97.8
CBR_g30767 Chara braunii HOM05D003867 ORTHO05D004593 2.3e-100 369.0 203 82.8
Cre10.g422600 Chlamydomonas reinhardtii HOM05D003867 ORTHO05D004593 2.2e-98 362.5 203 81.8
Actinidia20690 Actinidia chinensis HOM05D003867 ORTHO05D004593 8.3e-98 360.5 202 86.6
Nn7g37842 Nelumbo nucifera HOM05D003867 ORTHO05D004593 4.6e-96 354.8 180 94.4
PRCOL_00003927 Prasinoderma coloniale HOM05D003867 ORTHO05D004593 4.6e-96 354.8 204 80.4
Haze_26697 Corylus avellana HOM05D003867 ORTHO05D004593 2.8e-93 345.5 202 76.7
Sed0024813 Sechium edule HOM05D003867 ORTHO05D004593 2.9e-90 335.5 203 81.3
Nn3g20865 Nelumbo nucifera HOM05D003867 ORTHO05D004593 5.8e-83 311.2 158 93.0
Lj6P823T18 Lonicera japonica HOM05D003867 ORTHO05D004593 2.4e-68 262.7 129 96.1
HPP92_000985 Vanilla planifolia HOM05D003867 ORTHO05D004593 9.3e-57 224.2 111 95.5
MD16G1114800 Malus domestica HOM05D003867 ORTHO05D004593 6.2e-53 211.5 100 97.0
Nn8g40622 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.2e-51 207.2 102 95.1
HPP92_000984 Vanilla planifolia HOM05D003867 ORTHO05D004593 1.8e-44 183.3 84 98.8
Aqoxy84s003 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 4.1e-44 182.2 183 48.6
Aqoxy3G01811 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 6.9e-44 181.4 90 93.3
Nitab4.5_0000581g0020 Nicotiana tabacum HOM05D003867 ORTHO05D004593 1.7e-42 176.8 82 96.3
GSVIVG01020401001 Vitis vinifera HOM05D003867 ORTHO05D004593 2.5e-33 146.4 68 97.1
Haze_26928 Corylus avellana HOM05D003867 ORTHO05D004593 7.4e-30 134.8 81 77.8
Pp3c3_8640 Physcomitrium patens HOM05D003867 ORTHO05D004593 2.0e-22 110.2 83 66.3
Atru.chr11.2285 Acer truncatum HOM05D003867 ORTHO05D004593 2.8e-21 106.3 67 73.1
Actinidia09669 Actinidia chinensis HOM05D003867 ORTHO05D004593 1.1e-20 104.4 48 95.8
Pp3c13_10840 Physcomitrium patens HOM05D003867 ORTHO05D004593 5.0e-18 95.5 48 91.7
Actinidia09668 Actinidia chinensis HOM05D003867 ORTHO05D004593 7.2e-17 91.7 93 54.8
C02p03650 Brassica napus HOM05D003867 ORTHO05D004593 1.2e-16 90.9 127 44.9
BolC2t06324H Brassica oleracea HOM05D003867 ORTHO05D004593 6.1e-16 88.6 127 44.1
MD16G1114900 Malus domestica HOM05D003867 ORTHO05D004593 4.0e-15 85.9 45 86.7
Duzib128G1406 Durio zibethinus HOM05D003867 ORTHO05D004593 4.8e-13 79.0 79 53.2
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 1.6e-11 73.9 39 84.6
GSVIVG01013345001 Vitis vinifera HOM05D003867 ORTHO05D004593 1.6e-08 63.9 42 64.3
Potri.008G177801 Populus trichocarpa HOM05D003867 ORTHO05D004593 3.6e-08 62.8 29 89.7
Hund25436 Selenicereus undatus HOM05D000424 ORTHO05D008586 1.4e-07 60.8 136 33.1
Duzib052G0593 Durio zibethinus HOM05D000222 ORTHO05D001350 3.4e-06 56.2 38 68.4


User provided reference genes

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