Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2477 Trochodendron aralioides HOM05D006425 ORTHO05D007312 0.0e+00 2147.1 1084 100.0
Nn1g00347 Nelumbo nucifera HOM05D006425 ORTHO05D007312 0.0e+00 1692.9 1085 79.3
MBI12_g20265_MAGBIO Magnolia biondii HOM05D006425 ORTHO05D007312 0.0e+00 1674.1 1085 78.4
Cfa003773 Carpinus fangiana HOM05D006425 ORTHO05D007312 0.0e+00 1661.4 1087 77.1
CSS0033565 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 0.0e+00 1659.0 1084 77.3
QL08p046032 Quercus lobata HOM05D006425 ORTHO05D007312 0.0e+00 1652.1 1083 77.0
Aqoxy5G04315 Aquilegia oxysepala HOM05D006425 ORTHO05D007312 0.0e+00 1645.6 1073 77.0
Atru.chr5.713 Acer truncatum HOM05D006425 ORTHO05D007312 0.0e+00 1644.4 1078 75.7
Haze_15687 Corylus avellana HOM05D006425 ORTHO05D007312 0.0e+00 1642.1 1105 75.5
MD07G1153800 Malus domestica HOM05D006425 ORTHO05D007312 0.0e+00 1639.0 1080 75.6
Potri.014G101400 Populus trichocarpa HOM05D006425 ORTHO05D007312 0.0e+00 1637.1 1085 75.4
GSVIVG01027188001 Vitis vinifera HOM05D006425 ORTHO05D007312 0.0e+00 1628.6 1082 76.6
Lj7C496T17 Lonicera japonica HOM05D006425 ORTHO05D007312 0.0e+00 1627.1 1083 76.5
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 0.0e+00 1623.6 1071 77.8
TWI23G0835 Tripterygium wilfordii HOM05D006425 ORTHO05D007312 0.0e+00 1622.1 1084 75.6
Sabra14G0074600 Salix brachista HOM05D006425 ORTHO05D007312 0.0e+00 1619.8 1091 74.3
Thecc.01G338700 Theobroma cacao HOM05D006425 ORTHO05D007312 0.0e+00 1618.2 1082 75.5
PSO782G0220 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1614.0 1078 76.5
Duzib138G0057 Durio zibethinus HOM05D006425 ORTHO05D007312 0.0e+00 1610.1 1082 74.7
Manes.01G243600 Manihot esculenta HOM05D006425 ORTHO05D007312 0.0e+00 1609.0 1084 75.2
PSO063G5968 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1608.2 1078 76.5
Cpa.g.sc139.7 Carica papaya HOM05D006425 ORTHO05D007312 0.0e+00 1600.1 1074 75.5
FvH4_7g17030 Fragaria vesca HOM05D006425 ORTHO05D007312 0.0e+00 1593.9 1080 74.1
Rhsim07G0002300 Rhododendron simsii HOM05D006425 ORTHO05D007312 0.0e+00 1593.9 1078 76.2
RcHm_v2.0_Chr1g0360431 Rosa chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1593.9 1077 74.3
COL.COLO4_06242 Corchorus olitorius HOM05D006425 ORTHO05D007312 0.0e+00 1585.1 1101 73.4
Gorai.008G127000 Gossypium raimondii HOM05D006425 ORTHO05D007312 0.0e+00 1584.7 1072 74.3
Gohir.D12G117200 Gossypium hirsutum HOM05D006425 ORTHO05D007312 0.0e+00 1582.4 1072 74.2
Eucgr.E03445 Eucalyptus grandis HOM05D006425 ORTHO05D007312 0.0e+00 1570.8 1076 73.6
VMungo0540G0548 Vigna mungo HOM05D006425 ORTHO05D007312 0.0e+00 1570.1 1082 72.3
Glyma.03G259000 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1569.3 1082 72.3
PGSC0003DMG400000238 Solanum tuberosum HOM05D006425 ORTHO05D007312 0.0e+00 1565.4 1072 73.7
arahy.Tifrunner.gnm1.ann1.V6VX4F Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1565.1 1100 71.8
Phvul.006G115200 Phaseolus vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1564.7 1082 72.5
Glyma.19G257700 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1563.9 1075 72.8
FAN10G2644 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1560.0 1078 72.9
FAN10G4300 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1560.0 1077 73.2
Lj1g0017915 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1559.3 1072 73.2
Oeu007875.1 Olea europaea HOM05D006425 ORTHO05D007312 0.0e+00 1555.8 1084 73.1
FAN06G4481 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1553.9 1076 73.2
Sed0010112 Sechium edule HOM05D006425 ORTHO05D007312 0.0e+00 1552.0 1076 72.2
CAN.G1415.13 Capsicum annuum HOM05D006425 ORTHO05D007312 0.0e+00 1550.8 1074 73.1
CsaV3_3G007870 Cucumis sativus L. HOM05D006425 ORTHO05D007312 0.0e+00 1549.6 1079 72.1
Ca_09524_v3 Cicer arietinum L. HOM05D006425 ORTHO05D007312 0.0e+00 1549.3 1074 72.7
Lalb_Chr04g0261441 Lupinus albus HOM05D006425 ORTHO05D007312 0.0e+00 1549.3 1076 72.4
Thhalv10006637m.g Eutrema salsugineum HOM05D006425 ORTHO05D007312 0.0e+00 1548.1 1085 72.4
Sp1g01070 Schrenkiella parvula HOM05D006425 ORTHO05D007312 0.0e+00 1546.9 1082 71.8
TPR.G4756 Trifolium pratense HOM05D006425 ORTHO05D007312 0.0e+00 1546.6 1083 71.8
Solyc01g096160.4 Solanum lycopersicum HOM05D006425 ORTHO05D007312 0.0e+00 1543.5 1072 73.1
FAN06G3842 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1541.9 1077 72.9
FAN03G0670 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1538.1 1075 72.8
Psat3g001600 Pisum sativum HOM05D006425 ORTHO05D007312 0.0e+00 1537.7 1074 72.3
FAN01G0442 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1537.3 1075 72.7
AL1G11260 Arabidopsis lyrata HOM05D006425 ORTHO05D007312 0.0e+00 1535.0 1080 71.8
PGR102G0287 Punica granatum HOM05D006425 ORTHO05D007312 0.0e+00 1534.6 1083 71.1
THA.LOC104815884 Tarenaya hassleriana HOM05D006425 ORTHO05D007312 0.0e+00 1534.6 1080 71.6
CARHR001250 Cardamine hirsuta HOM05D006425 ORTHO05D007312 0.0e+00 1533.5 1075 72.7
AUR62022731 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1528.1 1074 72.4
arahy.Tifrunner.gnm1.ann1.GF075D Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1526.1 1112 70.1
BraA09t42237Z Brassica rapa HOM05D006425 ORTHO05D007312 0.0e+00 1523.5 1085 70.8
Medtr7g117870 Medicago truncatula HOM05D006425 ORTHO05D007312 0.0e+00 1521.9 1075 71.7
A09p69000 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1518.8 1079 70.9
ECA236G2333 Erigeron canadensis HOM05D006425 ORTHO05D007312 0.0e+00 1516.1 1069 72.4
C08p53570 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1514.6 1082 70.4
BolC8t52871H Brassica oleracea HOM05D006425 ORTHO05D007312 0.0e+00 1512.3 1077 70.6
Sc13g0006630 Simmondsia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1511.5 1070 70.1
Carub.0008s1137 Capsella rubella HOM05D006425 ORTHO05D007312 0.0e+00 1510.7 1087 70.7
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 0.0e+00 1510.4 1067 72.8
HanXRQChr04g0120411 Helianthus annuus HOM05D006425 ORTHO05D007312 0.0e+00 1509.6 1070 72.1
Cc02_g39660 Coffea canephora HOM05D006425 ORTHO05D007312 0.0e+00 1506.5 1076 70.1
Hund27175 Selenicereus undatus HOM05D006425 ORTHO05D007312 0.0e+00 1500.0 1094 70.2
AUR62004524 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1495.7 1071 71.2
Ah.05g179300 Amaranthus hybridus HOM05D006425 ORTHO05D007312 0.0e+00 1492.2 1071 70.7
Peaxi162Scf00345g00024 Petunia axillaris HOM05D006425 ORTHO05D007312 0.0e+00 1483.8 1069 71.7
Aa31LG1G10590 Aethionema arabicum HOM05D006425 ORTHO05D007312 0.0e+00 1482.6 1081 70.0
vmacro04289 Vaccinium macrocarpon HOM05D006425 ORTHO05D007312 0.0e+00 1481.8 1211 65.1
Migut.B01889 Erythranthe guttata HOM05D006425 ORTHO05D007312 0.0e+00 1475.3 1080 70.0
ATR0757G210 Amborella trichopoda HOM05D006425 ORTHO05D007312 0.0e+00 1472.2 1084 70.0
ClCG05G000660 Citrullus lanatus HOM05D006425 ORTHO05D007312 0.0e+00 1470.3 1071 71.1
Nitab4.5_0006770g0030 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1467.6 1074 70.9
SGA_v2.0_scaffold22G09958 Striga asiatica HOM05D006425 ORTHO05D007312 0.0e+00 1462.2 1084 69.0
MELO3C006005.2 Cucumis melo HOM05D006425 ORTHO05D007312 0.0e+00 1461.8 1073 69.9
HPP92_015094 Vanilla planifolia HOM05D006425 ORTHO05D007312 0.0e+00 1446.8 1084 68.2
Ciclev10018702m.g Citrus clementina HOM05D006425 ORTHO05D007312 0.0e+00 1438.7 983 75.2
AT1G01220 Arabidopsis thaliana HOM05D006425 ORTHO05D007312 0.0e+00 1378.6 942 73.0
SalBow3G3533 Salvia bowleyana HOM05D006425 ORTHO05D007312 0.0e+00 1373.2 1134 63.9
Lsat_1_v5_gn_7_2761 Lactuca sativa HOM05D006425 ORTHO05D007312 0.0e+00 1368.2 1090 66.9
Os03g0115100 Oryza sativa ssp. japonica HOM05D006425 ORTHO05D007312 0.0e+00 1360.5 1092 63.9
Zm00001eb001000 Zea mays HOM05D006425 ORTHO05D007312 0.0e+00 1340.1 1082 63.2
Lj1g0006712 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1330.9 949 71.2
SHI13064 Sapria himalayana HOM05D006425 ORTHO05D007312 0.0e+00 1258.0 1196 56.8
unitig_899.g14792 Utricularia gibba HOM05D006425 ORTHO05D007312 0.0e+00 1227.2 1068 59.0
Nitab4.5_0000307g0050 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1196.8 968 66.0
CiPaw.02G042200 Carya illinoinensis HOM05D006425 ORTHO05D007312 0.0e+00 1181.4 757 77.0
Actinidia07981 Actinidia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1170.2 1082 60.4
Prupe.2G192700 Prunus persica HOM05D006425 ORTHO05D007312 0.0e+00 1156.4 753 75.8
EL10Ac1g00230 Beta vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1094.0 754 72.9
Gohir.A12G113700 Gossypium hirsutum HOM05D006425 ORTHO05D007312 8.1e-309 1063.9 718 74.1
Mapoly0065s0064 Marchantia polymorpha HOM05D006425 ORTHO05D007312 1.8e-284 983.0 1076 49.1
Actinidia20260 Actinidia chinensis HOM05D006425 ORTHO05D007312 2.2e-277 959.5 1014 56.6
Pp3c27_4880 Physcomitrium patens HOM05D006425 ORTHO05D007312 2.9e-274 949.1 1079 48.9
Sopen01g039900 Solanum pennellii HOM05D006425 ORTHO05D007312 9.4e-257 891.0 614 73.6
SEGI_19319 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 5.2e-247 858.6 713 63.5
AagrBONN_evm.TU.Sc2ySwM_368.2372 Anthoceros agrestis HOM05D006425 ORTHO05D007312 7.8e-227 791.6 1022 45.1
BcaC07g42431 Brassica carinata HOM05D006425 ORTHO05D007312 8.6e-226 788.1 544 73.7
BcaC07g42430 Brassica carinata HOM05D006425 ORTHO05D007312 7.6e-198 695.3 510 67.8
Sed0002059 Sechium edule HOM05D006425 ORTHO05D007312 3.9e-194 682.9 655 56.9
CBR_g42133 Chara braunii HOM05D006425 ORTHO05D007312 8.1e-192 675.2 1514 33.9
Sopen01g039890 Solanum pennellii HOM05D006425 ORTHO05D007312 2.7e-163 580.5 398 73.6
Gohir.A12G113750 Gossypium hirsutum HOM05D006425 ORTHO05D007312 1.4e-130 471.9 338 71.9
Hma1.2p1_0180F.1_g079620 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 8.6e-85 319.7 203 77.8
MD01G1085000 Malus domestica HOM05D006425 ORTHO05D007312 3.4e-57 228.0 163 67.5
Hma1.2p1_0180F.1_g079630 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 1.3e-40 172.9 111 79.3
SEGI_38786 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 1.0e-21 110.2 59 84.7
Actinidia20216 Actinidia chinensis HOM05D006425 ORTHO05D007312 3.1e-18 98.6 54 83.3
VMungo0720G2246 Vigna mungo HOM05D006425 ORTHO05D007312 5.9e-17 94.4 65 63.1
CSS0018706 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 1.4e-10 73.2 49 65.3
CSS0027474 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 1.4e-10 73.2 49 65.3
MCO11G284 Micromonas commoda HOM05D006425 ORTHO05D007312 1.2e-09 70.1 226 28.3
CSS0040683 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 7.7e-09 67.4 40 75.0
TPR.G10878 Trifolium pratense HOM05D020190 ORTHO05D018030 8.5e-08 63.9 71 47.9
TPR.G39590 Trifolium pratense HOM05D020190 ORTHO05D018030 1.5e-07 63.2 71 47.9
SEGI_36326 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 3.6e-06 58.5 91 38.5


User provided reference genes

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