Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2438 Trochodendron aralioides HOM05D003549 ORTHO05D004223 3.8e-32 141.0 74 100.0
Rhsim12G0163400 Rhododendron simsii HOM05D003549 ORTHO05D004223 2.2e-24 115.2 72 83.3
Nn8g39923 Nelumbo nucifera HOM05D003549 ORTHO05D004223 1.4e-23 112.5 74 81.1
CiPaw.12G025200 Carya illinoinensis HOM05D003549 ORTHO05D004223 1.9e-23 112.1 72 80.6
Dinv33505 Davidia involucrata HOM05D003549 ORTHO05D004223 2.1e-22 108.6 74 81.1
TWI81G0050 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 2.1e-22 108.6 74 78.4
TWI81G1057 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 2.1e-22 108.6 74 78.4
CiPaw.11G028500 Carya illinoinensis HOM05D003549 ORTHO05D004223 4.6e-22 107.5 72 80.6
SGA_v2.0_scaffold90G27958 Striga asiatica HOM05D000215 ORTHO05D003454 7.8e-22 106.7 75 80.0
TWI60G0590 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 1.0e-21 106.3 74 79.7
Phvul.001G059000 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 1.7e-21 105.5 74 78.4
PSO017G2368 Papaver somniferum HOM05D003549 ORTHO05D004223 3.9e-21 104.4 74 74.3
Cc04_g12860 Coffea canephora HOM05D003549 ORTHO05D004223 8.7e-21 103.2 76 77.6
Glyma.04G181200 Glycine max HOM05D003549 ORTHO05D004223 8.7e-21 103.2 74 78.4
Sed0001837 Sechium edule HOM05D003549 ORTHO05D004223 8.7e-21 103.2 74 75.7
PSO478G4862 Papaver somniferum HOM05D003549 ORTHO05D004223 1.1e-20 102.8 74 73.0
TWI15G0885 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 1.1e-20 102.8 74 74.3
Aqoxy3G00995 Aquilegia oxysepala HOM05D003549 ORTHO05D004223 1.5e-20 102.4 76 77.6
Lj6g0023924 Lotus japonicus HOM05D003549 ORTHO05D004223 1.5e-20 102.4 74 75.7
Nitab4.5_0000852g0140 Nicotiana tabacum HOM05D003549 ORTHO05D004223 1.5e-20 102.4 75 77.3
Nitab4.5_0003857g0060 Nicotiana tabacum HOM05D003549 ORTHO05D004223 1.5e-20 102.4 75 77.3
Phvul.009G179900 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 1.5e-20 102.4 74 75.7
Haze_07495 Corylus avellana HOM05D003549 ORTHO05D004223 2.5e-20 101.7 74 77.0
Peaxi162Scf00017g02716 Petunia axillaris HOM05D003549 ORTHO05D004223 2.5e-20 101.7 75 77.3
Glyma.14G134200 Glycine max HOM05D003549 ORTHO05D004223 3.3e-20 101.3 74 75.7
Lj1g0007079 Lotus japonicus HOM05D003549 ORTHO05D004223 3.3e-20 101.3 74 75.7
RcHm_v2.0_Chr7g0193821 Rosa chinensis HOM05D003549 ORTHO05D004223 3.3e-20 101.3 71 78.9
Ca_16195_v3 Cicer arietinum L. HOM05D003549 ORTHO05D004223 4.3e-20 100.9 74 75.7
TAR371G0468 Trochodendron aralioides HOM05D003549 ORTHO05D004223 5.6e-20 100.5 74 81.1
Glyma.06G183700 Glycine max HOM05D003549 ORTHO05D004223 7.3e-20 100.1 74 75.7
Glyma.17G198800 Glycine max HOM05D003549 ORTHO05D004223 7.3e-20 100.1 70 77.1
RcHm_v2.0_Chr7g0184521 Rosa chinensis HOM05D003549 ORTHO05D004223 1.3e-19 99.4 71 77.5
Lalb_Chr08g0236401 Lupinus albus HOM05D003549 ORTHO05D004223 1.6e-19 99.0 74 75.7
GSVIVG01032498001 Vitis vinifera HOM05D003549 ORTHO05D004223 1.6e-19 99.0 74 73.0
SalBow2G1727 Salvia bowleyana HOM05D003549 ORTHO05D004223 2.1e-19 98.6 75 73.3
Dinv09155 Davidia involucrata HOM05D003549 ORTHO05D004223 2.8e-19 98.2 74 74.3
Actinidia19094 Actinidia chinensis HOM05D003549 ORTHO05D004223 4.8e-19 97.4 74 75.7
FAN04G1549 Fragaria x ananassa HOM05D003549 ORTHO05D004223 4.8e-19 97.4 71 76.1
FAN08G2999 Fragaria x ananassa HOM05D003549 ORTHO05D004223 4.8e-19 97.4 71 76.1
FAN13G2761 Fragaria x ananassa HOM05D003549 ORTHO05D004223 4.8e-19 97.4 71 76.1
PSO063G4497 Papaver somniferum HOM05D003549 ORTHO05D004223 4.8e-19 97.4 73 72.6
THA.LOC109116495 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 4.8e-19 97.4 74 73.0
MD06G1177000 Malus domestica HOM05D003549 ORTHO05D004223 1.8e-18 95.5 73 72.6
Psat5g114160 Pisum sativum HOM05D003549 ORTHO05D004223 1.8e-18 95.5 74 73.0
Lsat_1_v5_gn_4_74920 Lactuca sativa HOM05D003549 ORTHO05D004223 2.4e-18 95.1 76 73.7
Peaxi162Scf00535g00046 Petunia axillaris HOM05D003549 ORTHO05D004223 2.4e-18 95.1 75 72.0
Rhsim08G0170600 Rhododendron simsii HOM05D003549 ORTHO05D004223 3.1e-18 94.7 72 75.0
Hma1.2p1_0176F.1_g077660 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 4.0e-18 94.4 74 74.3
TAR622G0024 Trochodendron aralioides HOM05D003549 ORTHO05D004223 5.3e-18 94.0 74 73.0
TAR622G1417 Trochodendron aralioides HOM05D003549 ORTHO05D004223 5.3e-18 94.0 74 73.0
CSS0022405 Camellia sinensis var. sinensis HOM05D003549 ORTHO05D004223 6.9e-18 93.6 74 74.3
MBI15_g31119_MAGBIO Magnolia biondii HOM05D003549 ORTHO05D004223 6.9e-18 93.6 73 74.0
Duzib084G0774 Durio zibethinus HOM05D003549 ORTHO05D004223 9.0e-18 93.2 75 74.7
Duzib205G0517 Durio zibethinus HOM05D003549 ORTHO05D004223 9.0e-18 93.2 75 72.0
FvH4_5g05150 Fragaria vesca HOM05D003549 ORTHO05D004223 9.0e-18 93.2 71 73.2
FAN18G4010 Fragaria x ananassa HOM05D003549 ORTHO05D004223 9.0e-18 93.2 71 73.2
Hma1.2p1_0802F.1_g220520 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 9.0e-18 93.2 70 72.9
MD14G1183200 Malus domestica HOM05D003549 ORTHO05D004223 1.5e-17 92.4 73 71.2
PSO832G2372 Papaver somniferum HOM05D003549 ORTHO05D004223 1.5e-17 92.4 73 69.9
Actinidia33056 Actinidia chinensis HOM05D000215 ORTHO05D003454 2.6e-17 91.7 74 70.3
Ciclev10023184m.g Citrus clementina HOM05D003549 ORTHO05D004223 2.6e-17 91.7 74 71.6
QL02p076964 Quercus lobata HOM05D003549 ORTHO05D004223 2.6e-17 91.7 73 67.1
PGSC0003DMG400024492 Solanum tuberosum HOM05D003549 ORTHO05D004223 2.6e-17 91.7 75 70.7
Actinidia04982 Actinidia chinensis HOM05D000215 ORTHO05D003454 3.4e-17 91.3 74 70.3
CsaV3_1G008390 Cucumis sativus L. HOM05D003549 ORTHO05D004223 3.4e-17 91.3 74 71.6
Potri.017G066900 Populus trichocarpa HOM05D003549 ORTHO05D004223 4.5e-17 90.9 74 70.3
HanXRQChr16g0517241 Helianthus annuus HOM05D003549 ORTHO05D004223 5.8e-17 90.5 76 72.4
Mapoly0025s0126 Marchantia polymorpha HOM05D003549 ORTHO05D004223 5.8e-17 90.5 66 75.8
Solyc03g114170.3 Solanum lycopersicum HOM05D003549 ORTHO05D004223 7.6e-17 90.1 75 69.3
Oeu000929.1 Olea europaea HOM05D003549 ORTHO05D004223 9.9e-17 89.7 74 73.0
ClCG01G013030 Citrullus lanatus HOM05D003549 ORTHO05D004223 1.3e-16 89.4 74 70.3
Prupe.5G175700 Prunus persica HOM05D003549 ORTHO05D004223 1.3e-16 89.4 73 69.9
Medtr3g078130 Medicago truncatula HOM05D003549 ORTHO05D004223 2.2e-16 88.6 74 68.9
Potri.001G334600 Populus trichocarpa HOM05D003549 ORTHO05D004223 2.9e-16 88.2 68 72.1
ECA232G0606 Erigeron canadensis HOM05D003549 ORTHO05D004223 3.8e-16 87.8 74 68.9
Nn2g12408 Nelumbo nucifera HOM05D003549 ORTHO05D004223 3.8e-16 87.8 72 72.2
Zm00001eb332940 Zea mays HOM05D003549 ORTHO05D004223 4.9e-16 87.4 74 70.3
Sopen03g033240 Solanum pennellii HOM05D003549 ORTHO05D004223 6.4e-16 87.0 75 66.7
arahy.Tifrunner.gnm1.ann1.G4GSC6 Arachis hypogaea HOM05D003549 ORTHO05D004223 8.4e-16 86.7 74 70.3
arahy.Tifrunner.gnm1.ann1.TT1NYY Arachis hypogaea HOM05D003549 ORTHO05D004223 8.4e-16 86.7 74 70.3
Gohir.A07G060300 Gossypium hirsutum HOM05D003549 ORTHO05D004223 8.4e-16 86.7 74 68.9
BcaB05g23601 Brassica carinata HOM05D003549 ORTHO05D004223 1.9e-15 85.5 68 69.1
THA.LOC104805767 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 2.4e-15 85.1 71 67.6
CAN.G628.73 Capsicum annuum HOM05D003549 ORTHO05D004223 3.2e-15 84.7 75 66.7
Hma1.2p1_0967F.1_g242260 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 4.2e-15 84.3 82 62.2
Aa31LG2G1940 Aethionema arabicum HOM05D003549 ORTHO05D004223 7.1e-15 83.6 74 63.5
Migut.D01775 Erythranthe guttata HOM05D003549 ORTHO05D004223 7.1e-15 83.6 75 68.0
BcaB03g15337 Brassica carinata HOM05D003549 ORTHO05D004223 1.2e-14 82.8 74 64.9
TPR.G30392 Trifolium pratense HOM05D003549 ORTHO05D004223 1.2e-14 82.8 82 63.4
Thecc.03G009800 Theobroma cacao HOM05D003549 ORTHO05D004223 1.6e-14 82.4 75 65.3
Ciclev10017382m.g Citrus clementina HOM05D003549 ORTHO05D004223 2.7e-14 81.6 74 66.2
Solyc06g071390.3 Solanum lycopersicum HOM05D003549 ORTHO05D004223 2.7e-14 81.6 75 65.3
Sopen06g027670 Solanum pennellii HOM05D003549 ORTHO05D004223 2.7e-14 81.6 75 65.3
THA.LOC104823782 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 3.5e-14 81.3 75 64.0
FAN02G2804 Fragaria x ananassa HOM05D003549 ORTHO05D004223 4.6e-14 80.9 72 62.5
FAN05G0330 Fragaria x ananassa HOM05D003549 ORTHO05D004223 4.6e-14 80.9 72 62.5
FAN09G2996 Fragaria x ananassa HOM05D003549 ORTHO05D004223 4.6e-14 80.9 72 62.5
FAN09G4496 Fragaria x ananassa HOM05D003549 ORTHO05D004223 4.6e-14 80.9 72 62.5
Hund03159 Selenicereus undatus HOM05D003549 ORTHO05D004223 4.6e-14 80.9 70 68.6
PGSC0003DMG400027096 Solanum tuberosum HOM05D003549 ORTHO05D004223 4.6e-14 80.9 75 66.7
ClCG08G009420 Citrullus lanatus HOM05D003549 ORTHO05D004223 6.0e-14 80.5 74 66.2
MELO3C026538.2 Cucumis melo HOM05D003549 ORTHO05D004223 6.0e-14 80.5 74 66.2
CsaV3_6G031560 Cucumis sativus L. HOM05D003549 ORTHO05D004223 6.0e-14 80.5 74 66.2
DCAR_021678 Daucus carota HOM05D003549 ORTHO05D004223 1.0e-13 79.7 71 67.6
Sed0023520 Sechium edule HOM05D003549 ORTHO05D004223 1.0e-13 79.7 74 66.2
A07p32720 Brassica napus HOM05D003549 ORTHO05D004223 1.8e-13 79.0 70 67.1
C06p38930 Brassica napus HOM05D003549 ORTHO05D004223 1.8e-13 79.0 70 67.1
BolC6t38985H Brassica oleracea HOM05D003549 ORTHO05D004223 1.8e-13 79.0 70 67.1
BraA07t30898Z Brassica rapa HOM05D003549 ORTHO05D004223 1.8e-13 79.0 70 67.1
Atru.chr9.2446 Acer truncatum HOM05D003549 ORTHO05D004223 2.3e-13 78.6 51 78.4
Manes.14G067300 Manihot esculenta HOM05D003549 ORTHO05D004223 2.3e-13 78.6 76 64.5
Prupe.3G282400 Prunus persica HOM05D003549 ORTHO05D004223 2.3e-13 78.6 74 60.8
RcHm_v2.0_Chr2g0170951 Rosa chinensis HOM05D003549 ORTHO05D004223 2.3e-13 78.6 72 61.1
Os01g0273000 Oryza sativa ssp. japonica HOM05D003549 ORTHO05D004223 3.9e-13 77.8 72 65.3
Sc04g0001880 Simmondsia chinensis HOM05D003549 ORTHO05D004223 5.1e-13 77.4 72 63.9
AagrBONN_evm.TU.Sc2ySwM_117.1875 Anthoceros agrestis HOM05D003549 ORTHO05D004223 6.7e-13 77.0 71 62.0
Duzib068G0952 Durio zibethinus HOM05D003549 ORTHO05D004223 6.7e-13 77.0 81 65.4
FvH4_6g50520 Fragaria vesca HOM05D003549 ORTHO05D004223 6.7e-13 77.0 72 59.7
FAN14G1319 Fragaria x ananassa HOM05D003549 ORTHO05D004223 6.7e-13 77.0 72 59.7
BolC2t09796H Brassica oleracea HOM05D003549 ORTHO05D004223 1.1e-12 76.3 69 65.2
Manes.06G103400 Manihot esculenta HOM05D003549 ORTHO05D004223 3.3e-12 74.7 47 83.0
Peaxi162Scf00689g00329 Petunia axillaris HOM05D003549 ORTHO05D004223 4.3e-12 74.3 75 64.0
Peaxi162Scf00548g00225 Petunia axillaris HOM05D003549 ORTHO05D004223 7.4e-12 73.6 49 73.5
SMO139G0002 Selaginella moellendorffii HOM05D003549 ORTHO05D004223 7.4e-12 73.6 66 69.7
CAN.G781.29 Capsicum annuum HOM05D003549 ORTHO05D004223 9.6e-12 73.2 75 61.3
unitig_26.g9627 Utricularia gibba HOM05D000915 ORTHO05D001662 9.6e-12 73.2 73 60.3
SMO145G0027 Selaginella moellendorffii HOM05D003549 ORTHO05D004223 1.3e-11 72.8 67 67.2
COL.COLO4_34052 Corchorus olitorius HOM05D003549 ORTHO05D004223 1.6e-11 72.4 75 66.7
ECA246G5096 Erigeron canadensis HOM05D003549 ORTHO05D004223 1.6e-11 72.4 65 66.2
HPP92_002194 Vanilla planifolia HOM05D003549 ORTHO05D004223 1.6e-11 72.4 73 58.9
Aqoxy3G00999 Aquilegia oxysepala HOM05D003549 ORTHO05D004223 2.1e-11 72.0 74 62.2
CAN.G650.26 Capsicum annuum HOM05D003549 ORTHO05D004223 4.8e-11 70.9 55 69.1
Sp5g19250 Schrenkiella parvula HOM05D003549 ORTHO05D004223 4.8e-11 70.9 74 56.8
Cpa.g.sc124.38 Carica papaya HOM05D003549 ORTHO05D004223 6.2e-11 70.5 75 61.3
CAN.G208.13 Capsicum annuum HOM05D003549 ORTHO05D004223 8.1e-11 70.1 50 74.0
ECA246G0614 Erigeron canadensis HOM05D001816 ORTHO05D002001 1.4e-10 69.3 41 82.9
CDE05G3179 Ceratophyllum demersum HOM05D003549 ORTHO05D004223 1.8e-10 68.9 74 58.1
DCAR_021565 Daucus carota HOM05D003549 ORTHO05D004223 1.8e-10 68.9 65 69.2
CARHR049490 Cardamine hirsuta HOM05D003549 ORTHO05D004223 2.4e-10 68.6 74 55.4
Cpa.g.sc1914.1 Carica papaya HOM05D003549 ORTHO05D004223 2.4e-10 68.6 73 58.9
Thhalv10022469m.g Eutrema salsugineum HOM05D003549 ORTHO05D004223 2.4e-10 68.6 74 55.4
PGR083G2145 Punica granatum HOM05D003549 ORTHO05D004223 2.4e-10 68.6 74 58.1
HPP92_011135 Vanilla planifolia HOM05D003549 ORTHO05D004223 4.0e-10 67.8 114 46.5
AL8G14410 Arabidopsis lyrata HOM05D003549 ORTHO05D004223 5.3e-10 67.4 74 58.1
Eucgr.K02857 Eucalyptus grandis HOM05D003549 ORTHO05D004223 6.9e-10 67.0 68 63.2
AL2G18990 Arabidopsis lyrata HOM05D003549 ORTHO05D004223 9.0e-10 66.6 75 58.7
CANSAT64G1109 Cannabis sativa HOM05D003549 ORTHO05D004223 9.0e-10 66.6 74 55.4
SalBow5G5409 Salvia bowleyana HOM05D003549 ORTHO05D004223 1.2e-09 66.2 74 54.1
CDE10G0156 Ceratophyllum demersum HOM05D003549 ORTHO05D004223 1.5e-09 65.9 71 59.2
Lalb_Chr11g0071151 Lupinus albus HOM05D003549 ORTHO05D004223 2.0e-09 65.5 74 58.1
CDE10G1218 Ceratophyllum demersum HOM05D003549 ORTHO05D004223 5.8e-09 63.9 63 60.3
QL10p012114 Quercus lobata HOM05D003549 ORTHO05D004223 5.8e-09 63.9 128 39.8
Sc12g0005420 Simmondsia chinensis HOM05D003549 ORTHO05D004223 7.6e-09 63.5 72 56.9
ATR0752G058 Amborella trichopoda HOM05D003549 ORTHO05D004223 1.0e-08 63.2 71 60.6
ECA247G2394 Erigeron canadensis HOM05D003549 ORTHO05D004223 1.0e-08 63.2 75 54.7
Gohir.D12G274100 Gossypium hirsutum HOM05D003549 ORTHO05D004223 1.0e-08 63.2 72 56.9
Gorai.008G294500 Gossypium raimondii HOM05D003549 ORTHO05D004223 1.0e-08 63.2 72 56.9
Cfa019097 Carpinus fangiana HOM05D003549 ORTHO05D004223 4.9e-08 60.8 125 40.8
CBR_g8660 Chara braunii HOM05D003549 ORTHO05D004223 4.9e-08 60.8 71 56.3
AUR62036487 Chenopodium quinoa HOM05D003549 ORTHO05D004223 4.9e-08 60.8 70 58.6
EL10Ac5g10777 Beta vulgaris HOM05D003549 ORTHO05D004223 6.5e-08 60.5 68 57.4
TPR.G37556 Trifolium pratense HOM05D003549 ORTHO05D004223 8.4e-08 60.1 74 54.1
Aqoxy3G02997 Aquilegia oxysepala HOM05D003549 ORTHO05D004223 1.4e-07 59.3 67 53.7
Carub.0003s3029 Capsella rubella HOM05D003549 ORTHO05D004223 3.2e-07 58.2 74 54.1
AT5G45010 Arabidopsis thaliana HOM05D003549 ORTHO05D004223 4.2e-07 57.8 74 51.4
AUR62037088 Chenopodium quinoa HOM05D003549 ORTHO05D004223 4.2e-07 57.8 70 57.1
Hma1.2p1_0016F.1_g010800 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 7.1e-07 57.0 40 75.0
A02p23950 Brassica napus HOM05D003549 ORTHO05D004223 9.3e-07 56.6 69 55.1
Gohir.D07G065000 Gossypium hirsutum HOM05D003549 ORTHO05D004223 9.3e-07 56.6 49 69.4
Gorai.001G068500 Gossypium raimondii HOM05D003549 ORTHO05D004223 9.3e-07 56.6 49 69.4
Lsat_1_v5_gn_1_26640 Lactuca sativa HOM05D000122 ORTHO05D004223 9.3e-07 56.6 74 51.4
C02p37800 Brassica napus HOM05D003549 ORTHO05D004223 1.2e-06 56.2 69 55.1
AUR62008230 Chenopodium quinoa HOM05D003549 ORTHO05D004223 3.5e-06 54.7 70 54.3


User provided reference genes

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