Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 7.4e-181 637.1 327 100.0
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 3.0e-97 359.4 331 62.2
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 1.5e-93 347.1 333 59.5
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 5.6e-88 328.6 322 57.8
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 1.4e-86 323.9 330 57.9
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 7.6e-85 318.2 313 57.8
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 7.6e-85 318.2 333 57.1
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 1.7e-84 317.0 319 57.7
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 3.2e-83 312.8 325 55.7
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 2.7e-82 309.7 314 57.6
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 1.1e-80 304.3 326 54.6
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 1.1e-80 304.3 334 55.7
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 1.5e-80 303.9 330 55.8
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 5.8e-77 292.0 305 56.7
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 7.6e-77 291.6 325 54.8
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 2.2e-76 290.0 333 53.8
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 6.4e-76 288.5 290 58.6
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 3.0e-73 279.6 317 52.1
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 6.7e-73 278.5 309 53.4
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 1.1e-72 277.7 345 51.6
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 3.3e-72 276.2 339 51.9
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 3.3e-72 276.2 328 51.5
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 5.6e-72 275.4 329 50.8
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 7.4e-72 275.0 324 52.8
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 7.4e-72 275.0 328 51.5
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 2.1e-71 273.5 332 52.7
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 4.8e-71 272.3 333 50.2
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 4.8e-71 272.3 322 51.2
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 6.2e-71 271.9 309 52.8
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 1.1e-70 271.2 346 50.9
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 1.1e-70 271.2 307 52.8
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 1.8e-70 270.4 310 52.3
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.8e-70 270.4 307 52.4
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 6.9e-70 268.5 333 49.8
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 2.6e-69 266.5 334 50.3
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 2.6e-69 266.5 324 54.3
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 3.4e-69 266.2 345 49.6
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 3.4e-69 266.2 364 48.1
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 5.8e-69 265.4 338 49.1
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 7.6e-69 265.0 339 50.7
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 7.6e-69 265.0 333 49.8
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 7.6e-69 265.0 307 51.5
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 2.2e-68 263.5 345 48.7
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 1.9e-67 260.4 372 47.0
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 3.2e-67 259.6 322 53.1
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 9.3e-67 258.1 339 50.7
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 9.3e-67 258.1 321 49.8
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 2.1e-66 256.9 321 47.7
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 6.0e-66 255.4 368 47.3
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 1.0e-65 254.6 329 49.8
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 1.8e-65 253.8 336 48.8
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 3.0e-65 253.1 348 47.1
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 6.7e-65 251.9 349 47.0
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 9.6e-64 248.1 328 48.2
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 1.3e-63 247.7 361 45.7
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 1.6e-63 247.3 310 48.7
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 3.7e-63 246.1 315 46.3
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 1.4e-62 244.2 329 48.0
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 4.0e-62 242.7 321 48.3
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 9.0e-62 241.5 354 44.9
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 1.2e-61 241.1 316 48.7
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 1.2e-61 241.1 368 45.4
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 2.0e-61 240.4 327 47.1
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 2.0e-61 240.4 333 47.1
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 2.6e-61 240.0 296 50.3
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 7.6e-61 238.4 324 47.2
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 7.6e-61 238.4 332 46.7
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 2.2e-60 236.9 234 58.1
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 2.9e-60 236.5 323 45.5
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 3.8e-60 236.1 383 42.8
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 6.5e-60 235.3 343 46.4
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 8.4e-60 235.0 348 44.3
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 1.1e-59 234.6 327 46.5
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 1.9e-59 233.8 326 46.3
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 2.5e-59 233.4 326 46.6
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 3.2e-59 233.0 326 45.7
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 2.1e-58 230.3 340 45.6
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 3.5e-58 229.6 319 45.5
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 4.6e-58 229.2 332 45.5
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 7.9e-58 228.4 282 48.6
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 1.0e-57 228.0 323 45.8
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 1.3e-57 227.6 328 47.0
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 1.3e-57 227.6 350 45.1
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.8e-57 227.3 332 44.9
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 2.3e-57 226.9 336 45.2
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 3.9e-57 226.1 302 46.7
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 8.7e-57 224.9 336 44.9
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 1.9e-56 223.8 316 44.3
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 1.9e-56 223.8 356 43.3
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.3e-55 221.1 337 44.8
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 4.8e-55 219.2 330 43.9
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 4.8e-55 219.2 331 43.8
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 6.3e-55 218.8 328 46.0
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 8.2e-55 218.4 324 44.4
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 1.1e-54 218.0 361 42.4
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 5.3e-54 215.7 328 44.2
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 6.9e-54 215.3 304 47.0
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 1.2e-53 214.5 493 35.3
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 2.6e-53 213.4 325 44.9
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 7.7e-53 211.8 247 52.6
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 3.8e-52 209.5 298 45.6
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 1.9e-51 207.2 323 45.5
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 7.2e-51 205.3 215 58.6
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 1.6e-50 204.1 247 49.0
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 1.6e-50 204.1 242 49.6
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.8e-49 200.7 287 48.1
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 3.0e-49 199.9 286 45.1
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 3.0e-49 199.9 274 48.9
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 3.9e-49 199.5 175 61.1
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 6.3e-47 192.2 327 41.6
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 1.2e-45 188.0 270 45.6
Nn1g02049 Nelumbo nucifera HOM05D005155 ORTHO05D006266 3.4e-45 186.4 175 62.3
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 1.3e-44 184.5 368 39.4
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 5.5e-43 179.1 321 41.7
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 7.2e-43 178.7 343 40.5
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 1.2e-42 177.9 335 39.7
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 1.3e-39 167.9 216 46.3
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 2.8e-39 166.8 224 46.9
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 4.1e-38 162.9 228 47.4
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 1.2e-37 161.4 125 68.0
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 7.7e-37 158.7 215 46.0
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 1.0e-36 158.3 114 72.8
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 1.6e-34 151.0 112 70.5
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 8.0e-34 148.7 339 37.8
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 1.1e-32 144.8 275 40.0
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 3.7e-31 139.8 232 42.2
AUR62008242 Chenopodium quinoa HOM05D005155 ORTHO05D006266 2.3e-25 120.6 111 56.8
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 9.1e-22 108.6 211 36.5
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 6.5e-20 102.4 123 48.8
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 3.6e-18 96.7 68 70.6
Cc07_g20180 Coffea canephora HOM05D005155 ORTHO05D006266 1.2e-16 91.7 119 43.7
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 7.0e-14 82.4 199 32.7
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 1.0e-12 78.6 230 32.6
Cc00_g29960 Coffea canephora HOM05D005155 ORTHO05D006266 1.3e-12 78.2 80 48.8
MD17G1119400 Malus domestica HOM05D005155 ORTHO05D006266 1.3e-12 78.2 66 56.1
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 3.8e-12 76.6 185 35.1
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 3.8e-12 76.6 185 35.1
QL03p064628 Quercus lobata HOM05D005155 ORTHO05D006266 1.6e-10 71.2 242 29.8
A02p30930 Brassica napus HOM05D005155 ORTHO05D006266 4.0e-09 66.6 106 39.6
unitig_749.g13565 Utricularia gibba HOM05D005155 ORTHO05D006266 6.4e-07 59.3 230 33.0
Lj1A800T39 Lonicera japonica HOM05D005155 ORTHO05D006266 1.8e-06 57.8 48 60.4
PRCOL_00000835 Prasinoderma coloniale HOM05D005155 ORTHO05D006266 7.0e-06 55.8 188 29.3


User provided reference genes

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