Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2363 Trochodendron aralioides HOM05D005517 ORTHO05D006760 4.3e-31 137.5 77 100.0
TAR371G1004 Trochodendron aralioides HOM05D005517 ORTHO05D006760 4.5e-28 127.5 77 90.9
GSVIVG01028670001 Vitis vinifera HOM05D005517 ORTHO05D006760 1.2e-25 119.4 77 84.4
Nn3g16415 Nelumbo nucifera HOM05D005517 ORTHO05D006760 2.3e-24 115.2 77 83.1
Dinv33325 Davidia involucrata HOM05D005517 ORTHO05D006760 3.9e-24 114.4 77 84.4
CiPaw.03G057500 Carya illinoinensis HOM05D005517 ORTHO05D006760 2.5e-23 111.7 77 80.5
Glyma.19G093900 Glycine max HOM05D005517 ORTHO05D006760 7.4e-23 110.2 77 76.6
Dinv25651 Davidia involucrata HOM05D005517 ORTHO05D006760 9.6e-23 109.8 77 80.5
Manes.15G162502 Manihot esculenta HOM05D005517 ORTHO05D006760 1.3e-22 109.4 77 76.6
Atru.chr6.2589 Acer truncatum HOM05D005517 ORTHO05D006760 2.1e-22 108.6 77 80.5
Aqoxy1G01489 Aquilegia oxysepala HOM05D005517 ORTHO05D006760 2.1e-22 108.6 77 75.3
CANSAT64G1159 Cannabis sativa HOM05D005517 ORTHO05D006760 2.1e-22 108.6 77 77.9
Sopen04g004730 Solanum pennellii HOM05D005517 ORTHO05D006760 2.1e-22 108.6 77 77.9
PGSC0003DMG400032535 Solanum tuberosum HOM05D005517 ORTHO05D006760 2.1e-22 108.6 77 77.9
CSS0012820 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 3.7e-22 107.8 77 79.2
Migut.F00052 Erythranthe guttata HOM05D005517 ORTHO05D006760 4.8e-22 107.5 77 79.2
MBI06_g06692_MAGBIO Magnolia biondii HOM05D005517 ORTHO05D006760 4.8e-22 107.5 77 81.8
CAN.G473.115 Capsicum annuum HOM05D005517 ORTHO05D006760 6.3e-22 107.1 77 76.6
Cpa.g.sc70.124 Carica papaya HOM05D005517 ORTHO05D006760 6.3e-22 107.1 73 79.5
Potri.001G328100 Populus trichocarpa HOM05D005517 ORTHO05D006760 6.3e-22 107.1 77 75.3
Cc10_g16370 Coffea canephora HOM05D005517 ORTHO05D006760 1.1e-21 106.3 77 77.9
ClCG05G013610 Citrullus lanatus HOM05D005517 ORTHO05D006760 1.8e-21 105.5 77 79.2
Solyc04g009570.3 Solanum lycopersicum HOM05D005517 ORTHO05D006760 1.8e-21 105.5 77 76.6
CDE08G1355 Ceratophyllum demersum HOM05D005517 ORTHO05D006760 2.4e-21 105.1 77 72.7
Ciclev10017370m.g Citrus clementina HOM05D005517 ORTHO05D006760 2.4e-21 105.1 77 76.6
Hma1.2p1_1057F.1_g252720 Hydrangea macrophylla HOM05D005517 ORTHO05D006760 3.1e-21 104.8 77 77.9
Cc03_g13370 Coffea canephora HOM05D005517 ORTHO05D006760 4.1e-21 104.4 77 74.0
Phvul.001G091300 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 4.1e-21 104.4 77 71.4
Potri.017G066388 Populus trichocarpa HOM05D005517 ORTHO05D006760 5.3e-21 104.0 74 73.0
Hund05668 Selenicereus undatus HOM05D005517 ORTHO05D006760 5.3e-21 104.0 78 80.8
Oeu063019.1 Olea europaea HOM05D005517 ORTHO05D006760 6.9e-21 103.6 77 76.6
TWI74G0054 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 6.9e-21 103.6 77 74.0
TWI74G0227 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 6.9e-21 103.6 77 74.0
CSS0038475 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 9.0e-21 103.2 77 75.3
Rhsim08G0041900 Rhododendron simsii HOM05D005517 ORTHO05D006760 9.0e-21 103.2 77 76.6
Glyma.16G054600 Glycine max HOM05D005517 ORTHO05D006760 1.2e-20 102.8 75 73.3
Peaxi162Scf00420g00633 Petunia axillaris HOM05D005517 ORTHO05D006760 2.0e-20 102.1 77 71.4
Eucgr.H04420 Eucalyptus grandis HOM05D005517 ORTHO05D006760 2.6e-20 101.7 77 76.6
Ca_26962_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 3.4e-20 101.3 77 74.0
Sopen02g038880 Solanum pennellii HOM05D005517 ORTHO05D006760 3.4e-20 101.3 77 74.0
PGSC0003DMG402020250 Solanum tuberosum HOM05D005517 ORTHO05D006760 3.4e-20 101.3 77 74.0
Nitab4.5_0007375g0080 Nicotiana tabacum HOM05D005517 ORTHO05D006760 4.5e-20 100.9 77 72.7
Sabra17G0058600 Salix brachista HOM05D005517 ORTHO05D006760 4.5e-20 100.9 74 68.9
HPP92_000894 Vanilla planifolia HOM05D005517 ORTHO05D006760 4.5e-20 100.9 77 71.4
Lsat_1_v5_gn_1_29421 Lactuca sativa HOM05D005517 ORTHO05D006760 5.9e-20 100.5 74 75.7
Lj1g0000511 Lotus japonicus HOM05D005517 ORTHO05D006760 5.9e-20 100.5 77 72.7
CARHR199240 Cardamine hirsuta HOM05D005517 ORTHO05D006760 7.6e-20 100.1 73 75.3
HanXRQChr02g0035131 Helianthus annuus HOM05D005517 ORTHO05D006760 7.6e-20 100.1 74 74.3
THA.LOC104803813 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 7.6e-20 100.1 73 71.2
Duzib264G0094 Durio zibethinus HOM05D005517 ORTHO05D006760 1.0e-19 99.8 69 78.3
Medtr7g028755 Medicago truncatula HOM05D005517 ORTHO05D006760 1.0e-19 99.8 77 72.7
RcHm_v2.0_Chr1g0371371 Rosa chinensis HOM05D005517 ORTHO05D006760 1.0e-19 99.8 77 75.3
RcHm_v2.0_Chr7g0186891 Rosa chinensis HOM05D005517 ORTHO05D006760 1.0e-19 99.8 77 75.3
Thecc.04G039500 Theobroma cacao HOM05D005517 ORTHO05D006760 1.0e-19 99.8 69 78.3
Gohir.A07G229900 Gossypium hirsutum HOM05D005517 ORTHO05D006760 1.3e-19 99.4 68 79.4
Gohir.D07G237100 Gossypium hirsutum HOM05D005517 ORTHO05D006760 1.3e-19 99.4 68 79.4
Gorai.001G273000 Gossypium raimondii HOM05D005517 ORTHO05D006760 1.3e-19 99.4 68 79.4
vmacro22457 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 1.3e-19 99.4 77 71.4
Lalb_Chr16g0380111 Lupinus albus HOM05D005517 ORTHO05D006760 1.7e-19 99.0 77 71.4
BcaB08g36959 Brassica carinata HOM05D005517 ORTHO05D006760 2.2e-19 98.6 73 69.9
SEGI_12962 Sequoiadendron giganteum HOM05D005517 ORTHO05D006760 2.9e-19 98.2 77 64.9
COL.COLO4_13282 Corchorus olitorius HOM05D005517 ORTHO05D006760 3.8e-19 97.8 68 77.9
Prupe.5G129500 Prunus persica HOM05D005517 ORTHO05D006760 3.8e-19 97.8 77 74.0
Zm00001eb293020 Zea mays HOM05D005517 ORTHO05D006760 3.8e-19 97.8 78 70.5
BcaC04g19059 Brassica carinata HOM05D005517 ORTHO05D006760 5.0e-19 97.4 73 68.5
C09p63000 Brassica napus HOM05D005517 ORTHO05D006760 5.0e-19 97.4 73 68.5
BolC9t59138H Brassica oleracea HOM05D005517 ORTHO05D006760 5.0e-19 97.4 73 68.5
Os05g0517800 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 5.0e-19 97.4 78 69.2
MELO3C014894.2 Cucumis melo HOM05D005517 ORTHO05D006760 6.5e-19 97.1 77 76.6
A10p24320 Brassica napus HOM05D005517 ORTHO05D006760 1.1e-18 96.3 73 67.1
BraA10t44498Z Brassica rapa HOM05D005517 ORTHO05D006760 1.1e-18 96.3 73 67.1
Duzib147G1371 Durio zibethinus HOM05D005517 ORTHO05D006760 1.1e-18 96.3 73 75.3
ECA232G0857 Erigeron canadensis HOM05D005517 ORTHO05D006760 1.1e-18 96.3 74 71.6
A02p02340 Brassica napus HOM05D005517 ORTHO05D006760 1.4e-18 95.9 73 69.9
BraA02t05205Z Brassica rapa HOM05D005517 ORTHO05D006760 1.4e-18 95.9 73 69.9
Carub.0006s1230 Capsella rubella HOM05D005517 ORTHO05D006760 1.4e-18 95.9 74 71.6
Lsat_1_v5_gn_4_78980 Lactuca sativa HOM05D005517 ORTHO05D006760 1.4e-18 95.9 74 73.0
AT5G14105 Arabidopsis thaliana HOM05D005517 ORTHO05D006760 1.9e-18 95.5 74 73.0
BcaB01g06344 Brassica carinata HOM05D005517 ORTHO05D006760 1.9e-18 95.5 73 68.5
CsaV3_3G026940 Cucumis sativus L. HOM05D005517 ORTHO05D006760 1.9e-18 95.5 77 71.4
Duzib187G1036 Durio zibethinus HOM05D005517 ORTHO05D006760 1.9e-18 95.5 69 73.9
CiPaw.04G038900 Carya illinoinensis HOM05D005517 ORTHO05D006760 4.2e-18 94.4 69 76.8
Aa31LG11G14910 Aethionema arabicum HOM05D005517 ORTHO05D006760 5.5e-18 94.0 73 67.1
EL10Ac7g18130 Beta vulgaris HOM05D005517 ORTHO05D006760 5.5e-18 94.0 75 69.3
arahy.Tifrunner.gnm1.ann1.3828X0 Arachis hypogaea HOM05D005517 ORTHO05D006760 7.2e-18 93.6 77 68.8
Gohir.D04G075800 Gossypium hirsutum HOM05D005517 ORTHO05D006760 7.2e-18 93.6 69 72.5
QL10p050767 Quercus lobata HOM05D005517 ORTHO05D006760 7.2e-18 93.6 68 76.5
Rhsim10G0005200 Rhododendron simsii HOM05D005517 ORTHO05D006760 7.2e-18 93.6 77 67.5
FvH4_5g10930 Fragaria vesca HOM05D005517 ORTHO05D006760 9.3e-18 93.2 80 72.5
FAN08G0577 Fragaria x ananassa HOM05D005517 ORTHO05D006760 9.3e-18 93.2 80 72.5
FAN13G3313 Fragaria x ananassa HOM05D005517 ORTHO05D006760 9.3e-18 93.2 80 72.5
FAN18G2496 Fragaria x ananassa HOM05D005517 ORTHO05D006760 9.3e-18 93.2 80 72.5
PSO210G3561 Papaver somniferum HOM05D005517 ORTHO05D006760 9.3e-18 93.2 77 66.2
Psat5g229880 Pisum sativum HOM05D005517 ORTHO05D006760 9.3e-18 93.2 77 66.2
BcaC03g13514 Brassica carinata HOM05D005517 ORTHO05D006760 1.2e-17 92.8 73 68.5
BcaC03g13515 Brassica carinata HOM05D005517 ORTHO05D006760 1.2e-17 92.8 73 68.5
Psat6g022360 Pisum sativum HOM05D005517 ORTHO05D006760 2.1e-17 92.0 77 67.5
Lalb_Chr05g0214841 Lupinus albus HOM05D005517 ORTHO05D006760 2.7e-17 91.7 77 66.2
BcaNung06018 Brassica carinata HOM05D005517 ORTHO05D006760 3.6e-17 91.3 73 67.1
HanXRQChr16g0497941 Helianthus annuus HOM05D005517 ORTHO05D006760 3.6e-17 91.3 74 68.9
QL02p071008 Quercus lobata HOM05D005517 ORTHO05D006760 3.6e-17 91.3 64 78.1
C02p06560 Brassica napus HOM05D005517 ORTHO05D006760 6.1e-17 90.5 73 68.5
Medtr3g007670 Medicago truncatula HOM05D005517 ORTHO05D006760 6.1e-17 90.5 78 67.9
PSO302G0245 Papaver somniferum HOM05D005517 ORTHO05D006760 6.1e-17 90.5 77 64.9
Aa31LG5G11080 Aethionema arabicum HOM05D005517 ORTHO05D006760 2.3e-16 88.6 70 65.7
AUR62006995 Chenopodium quinoa HOM05D005517 ORTHO05D006760 2.3e-16 88.6 75 62.7
Hund07167 Selenicereus undatus HOM05D005517 ORTHO05D006760 3.9e-16 87.8 75 61.3
TWI34G0084 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 3.9e-16 87.8 77 68.8
TWI34G1158 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 3.9e-16 87.8 77 68.8
TPR.G30072 Trifolium pratense HOM05D005517 ORTHO05D006760 6.7e-16 87.0 77 63.6
TWI60G0382 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 6.7e-16 87.0 77 68.8
BcaC03g13513 Brassica carinata HOM05D005517 ORTHO05D006760 8.7e-16 86.7 72 63.9
AUR62000640 Chenopodium quinoa HOM05D005517 ORTHO05D006760 1.5e-15 85.9 69 63.8
Haze_14891 Corylus avellana HOM05D005517 ORTHO05D006760 1.5e-15 85.9 141 45.4
MD06G1118400 Malus domestica HOM05D005517 ORTHO05D006760 4.3e-15 84.3 77 66.2
EL10Ac4g09777 Beta vulgaris HOM05D005517 ORTHO05D006760 5.7e-15 84.0 75 65.3
Ca_14034_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 7.4e-15 83.6 69 62.3
MD14G1126500 Malus domestica HOM05D005517 ORTHO05D006760 1.6e-14 82.4 78 62.8
PGR142G3118 Punica granatum HOM05D005517 ORTHO05D006760 8.2e-14 80.1 78 66.7
Thhalv10021865m.g Eutrema salsugineum HOM05D005517 ORTHO05D006760 1.4e-13 79.3 76 63.2
Sabra16G0209900 Salix brachista HOM05D005517 ORTHO05D006760 1.8e-13 79.0 136 41.9
THA.LOC104814182 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 4.1e-13 77.8 124 41.9
Cc02_g28320 Coffea canephora HOM05D005517 ORTHO05D006760 5.3e-13 77.4 61 67.2
Peaxi162Scf00064g01122 Petunia axillaris HOM05D005517 ORTHO05D006760 1.5e-12 75.9 65 63.1
AagrBONN_evm.TU.Sc2ySwM_228.2988 Anthoceros agrestis HOM05D005517 ORTHO05D006760 2.0e-12 75.5 77 61.0
Os03g0733000 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 3.4e-12 74.7 78 57.7
Phvul.009G125500 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 4.5e-12 74.3 52 71.2
arahy.Tifrunner.gnm1.ann1.9JMW1H Arachis hypogaea HOM05D005517 ORTHO05D006760 2.9e-11 71.6 49 75.5
Prupe.2G009500 Prunus persica HOM05D005517 ORTHO05D006760 2.9e-11 71.6 77 62.3
TPR.G36037 Trifolium pratense HOM05D005517 ORTHO05D006760 4.2e-10 67.8 50 68.0
Mapoly0055s0070 Marchantia polymorpha HOM05D005517 ORTHO05D006760 1.6e-09 65.9 76 48.7
vmacro05969 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 2.1e-09 65.5 72 51.4
Sed0001513 Sechium edule HOM05D005517 ORTHO05D006760 3.0e-08 61.6 128 42.2
Pp3c1_33450 Physcomitrium patens HOM05D005517 ORTHO05D006760 7.4e-07 57.0 68 45.6
Pp3c14_7680 Physcomitrium patens HOM05D005517 ORTHO05D006760 2.2e-06 55.5 59 50.8
MCO07G725 Micromonas commoda HOM05D005517 ORTHO05D006760 8.2e-06 53.5 63 47.6


User provided reference genes

Program Settings