Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 5.7e-192 674.1 343 100.0
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 1.1e-91 340.9 343 58.3
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 2.4e-89 333.2 317 56.5
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 2.0e-88 330.1 371 53.9
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 9.4e-86 321.2 345 54.5
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 2.0e-83 313.5 346 53.5
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 8.2e-82 308.1 348 54.3
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 1.1e-81 307.8 363 53.2
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 1.1e-81 307.8 363 52.6
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 2.0e-80 303.5 343 53.1
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 2.6e-80 303.1 346 51.7
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 2.6e-80 303.1 347 55.0
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 3.2e-78 296.2 353 52.1
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 2.1e-77 293.5 354 51.4
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 2.1e-77 293.5 345 51.9
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 1.8e-76 290.4 354 50.8
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 8.8e-76 288.1 378 45.8
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 1.5e-75 287.3 377 46.9
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 1.7e-74 283.9 347 51.0
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 1.7e-74 283.9 347 52.2
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.7e-74 283.9 368 49.7
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 1.1e-73 281.2 346 49.4
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 1.4e-73 280.8 347 49.6
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 1.8e-73 280.4 340 50.6
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 3.1e-73 279.6 378 45.5
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 1.6e-72 277.3 347 48.7
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 1.9e-70 270.4 347 48.4
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 3.2e-70 269.6 336 47.3
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 3.0e-68 263.1 335 49.9
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 6.8e-68 261.9 373 47.7
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 8.8e-68 261.5 355 45.1
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 3.4e-67 259.6 347 48.1
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 3.4e-67 259.6 360 45.8
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 4.8e-66 255.8 353 48.2
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 4.8e-66 255.8 177 74.0
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 1.1e-65 254.6 345 47.5
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 1.1e-65 254.6 212 62.7
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 2.0e-64 250.4 339 48.7
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 5.9e-64 248.8 348 46.6
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 5.9e-64 248.8 355 44.2
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 1.0e-63 248.1 339 46.6
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 1.0e-63 248.1 361 44.3
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 2.3e-63 246.9 333 45.9
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 2.9e-63 246.5 233 62.2
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 3.8e-63 246.1 334 47.3
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 1.1e-62 244.6 385 44.2
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 2.5e-62 243.4 337 46.6
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 7.2e-62 241.9 319 47.0
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 1.2e-61 241.1 347 43.2
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 1.2e-61 241.1 343 44.3
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 1.2e-61 241.1 351 43.3
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 1.2e-61 241.1 334 44.6
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 2.1e-61 240.4 206 62.1
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 2.1e-61 240.4 334 45.2
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 4.7e-61 239.2 345 42.0
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 8.0e-61 238.4 382 41.6
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 8.0e-61 238.4 337 47.2
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 1.0e-60 238.0 376 40.4
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 3.0e-60 236.5 365 41.4
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 5.2e-60 235.7 383 40.7
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 5.2e-60 235.7 363 42.1
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 1.2e-59 234.6 288 46.9
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 2.6e-59 233.4 373 40.8
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 9.8e-59 231.5 375 42.1
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 1.7e-58 230.7 377 41.1
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 2.2e-58 230.3 232 52.6
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 2.2e-58 230.3 333 43.5
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 4.9e-58 229.2 387 40.6
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 4.9e-58 229.2 347 43.2
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 6.3e-58 228.8 393 41.0
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 1.1e-57 228.0 388 41.0
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 1.8e-57 227.3 375 42.4
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 1.8e-57 227.3 318 44.7
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 5.4e-57 225.7 385 40.8
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 9.2e-57 224.9 175 63.4
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 2.0e-56 223.8 342 40.1
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 3.5e-56 223.0 387 41.3
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 3.5e-56 223.0 193 60.6
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 7.8e-56 221.9 382 39.8
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 1.3e-55 221.1 347 42.9
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 2.3e-55 220.3 176 63.6
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 1.9e-54 217.2 344 41.9
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 5.6e-54 215.7 389 38.6
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 2.1e-53 213.8 217 53.5
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 2.8e-53 213.4 174 60.9
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 2.8e-53 213.4 175 61.7
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 3.6e-53 213.0 214 53.3
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 6.1e-53 212.2 270 45.6
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 3.1e-52 209.9 338 40.5
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 1.2e-51 208.0 171 64.9
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 3.4e-51 206.5 193 57.5
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 5.8e-51 205.7 176 58.0
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 7.5e-51 205.3 232 51.7
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 2.0e-48 197.2 164 57.3
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 3.9e-47 193.0 406 36.0
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 1.5e-46 191.0 181 53.6
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 8.0e-45 185.3 122 76.2
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 1.9e-41 174.1 159 61.0
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 5.2e-36 156.0 255 43.5
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 2.6e-35 153.7 172 48.3
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 1.4e-33 147.9 241 38.2
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 2.8e-29 133.7 253 39.5
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 1.5e-27 127.9 122 49.2
Hma1.2p1_1094F.1_g256330 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 2.0e-27 127.5 228 42.1
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 1.1e-25 121.7 208 34.1
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 2.3e-23 114.0 246 34.6
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 5.6e-22 109.4 317 27.8
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 6.2e-13 79.3 67 50.7
MCO16G170 Micromonas commoda HOM05D006765 ORTHO05D008554 8.1e-13 79.0 182 29.1
MD03G1037100 Malus domestica HOM05D006765 ORTHO05D008554 4.9e-10 69.7 165 31.5
Manes.05G203050 Manihot esculenta HOM05D006765 ORTHO05D008554 1.6e-08 64.7 68 55.9


User provided reference genes

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