Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 2.3e-84 315.5 151 100.0
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 4.3e-43 178.3 142 62.7
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.8e-42 175.6 111 76.6
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.5e-40 169.9 135 65.2
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 7.6e-40 167.5 135 63.7
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 1.0e-39 167.2 135 63.0
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 1.0e-39 167.2 139 61.9
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 6.5e-39 164.5 142 59.9
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 1.1e-38 163.7 164 56.7
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 3.2e-38 162.2 135 62.2
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.2e-38 162.2 135 62.2
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.2e-38 162.2 135 62.2
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.2e-38 162.2 135 62.2
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 3.2e-38 162.2 135 63.7
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 3.2e-38 162.2 135 61.5
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 7.2e-38 161.0 135 62.2
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 1.2e-37 160.2 135 62.2
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 3.6e-37 158.7 139 60.4
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 4.6e-37 158.3 139 58.3
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 7.9e-37 157.5 135 61.5
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 7.9e-37 157.5 135 61.5
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 7.9e-37 157.5 135 60.7
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 1.0e-36 157.1 135 62.2
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 1.3e-36 156.8 135 60.0
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 1.3e-36 156.8 135 61.5
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 1.8e-36 156.4 134 59.7
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 1.8e-36 156.4 135 60.0
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 2.3e-36 156.0 135 60.7
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 3.0e-36 155.6 135 60.0
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 3.0e-36 155.6 135 58.5
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 3.9e-36 155.2 135 60.7
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 3.9e-36 155.2 135 60.7
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 5.1e-36 154.8 135 58.5
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 8.7e-36 154.1 135 60.7
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 8.7e-36 154.1 137 59.1
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 8.7e-36 154.1 137 59.1
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 8.7e-36 154.1 164 53.0
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.1e-35 153.7 135 60.7
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 1.1e-35 153.7 135 58.5
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 1.1e-35 153.7 135 58.5
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.5e-35 153.3 135 58.5
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 1.5e-35 153.3 136 57.4
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 1.5e-35 153.3 135 59.3
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 1.9e-35 152.9 135 58.5
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 2.5e-35 152.5 135 58.5
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 2.5e-35 152.5 133 59.4
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 3.3e-35 152.1 135 59.3
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 4.3e-35 151.8 133 59.4
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 5.7e-35 151.4 135 57.8
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 7.4e-35 151.0 135 58.5
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 7.4e-35 151.0 136 58.1
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 7.4e-35 151.0 135 57.8
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 7.4e-35 151.0 135 57.8
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 7.4e-35 151.0 142 56.3
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 7.4e-35 151.0 136 58.1
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 9.7e-35 150.6 135 56.3
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 9.7e-35 150.6 135 56.3
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 9.7e-35 150.6 142 58.5
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 1.3e-34 150.2 139 56.8
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 1.3e-34 150.2 136 56.6
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 1.6e-34 149.8 135 57.0
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 2.2e-34 149.4 135 57.0
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 2.2e-34 149.4 135 57.8
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 2.8e-34 149.1 133 58.6
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 2.8e-34 149.1 133 58.6
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 2.8e-34 149.1 133 58.6
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 2.8e-34 149.1 135 57.8
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 3.7e-34 148.7 85 81.2
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 4.8e-34 148.3 135 57.8
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 4.8e-34 148.3 135 57.8
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 6.3e-34 147.9 122 63.1
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 8.2e-34 147.5 135 55.6
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 8.2e-34 147.5 135 56.3
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 8.2e-34 147.5 135 55.6
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 1.1e-33 147.1 135 54.8
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 1.1e-33 147.1 135 57.8
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 2.4e-33 146.0 135 54.1
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 2.4e-33 146.0 135 54.1
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.4e-33 146.0 139 54.0
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 3.1e-33 145.6 135 53.3
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 3.1e-33 145.6 135 54.8
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 5.3e-33 144.8 139 53.2
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 6.9e-33 144.4 136 53.7
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 9.1e-33 144.1 135 52.6
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 1.2e-32 143.7 126 59.5
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 1.2e-32 143.7 118 62.7
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 1.2e-32 143.7 135 53.3
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.2e-32 143.7 135 56.3
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.5e-32 143.3 139 53.2
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 3.4e-32 142.1 135 54.8
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 4.5e-32 141.7 134 56.0
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 4.5e-32 141.7 85 76.5
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 5.9e-32 141.4 135 56.3
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 1.0e-31 140.6 135 55.6
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 1.7e-31 139.8 143 51.7
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 1.7e-31 139.8 143 51.7
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 2.2e-31 139.4 123 61.0
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 2.9e-31 139.0 122 59.0
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 2.9e-31 139.0 126 56.3
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 3.8e-31 138.7 131 55.0
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 3.8e-31 138.7 123 59.3
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 8.5e-31 137.5 135 52.6
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 8.5e-31 137.5 126 55.6
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 1.9e-30 136.3 85 72.9
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 1.2e-29 133.7 90 71.1
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 1.6e-29 133.3 116 59.5
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.7e-29 132.5 85 74.1
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 2.7e-29 132.5 120 58.3
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 2.7e-29 132.5 135 51.1
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 2.7e-29 132.5 85 74.1
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 3.9e-28 128.6 85 70.6
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 3.3e-27 125.6 136 47.8
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 5.7e-27 124.8 117 55.6
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 1.7e-26 123.2 185 41.1
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 2.2e-26 122.9 67 83.6
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 2.8e-26 122.5 85 70.6
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 4.8e-26 121.7 66 87.9
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 8.2e-26 120.9 68 83.8
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 5.3e-25 118.2 85 64.7
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 2.3e-20 102.8 75 57.3
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 3.0e-20 102.4 128 40.6
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 4.1e-17 92.0 67 58.2
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 9.1e-17 90.9 130 41.5
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 5.2e-12 75.1 61 60.7
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 6.7e-12 74.7 115 43.5
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 4.8e-10 68.6 79 48.1


User provided reference genes

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