Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2292 Trochodendron aralioides HOM05D007328 ORTHO05D009246 1.9e-50 202.2 103 100.0
Dinv38499 Davidia involucrata HOM05D007328 ORTHO05D009246 1.2e-39 166.4 103 83.5
CiPaw.12G033600 Carya illinoinensis HOM05D007328 ORTHO05D009246 2.0e-39 165.6 101 83.2
CSS0000986 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 4.4e-39 164.5 102 82.4
Sc04g0001180 Simmondsia chinensis HOM05D007328 ORTHO05D009246 4.4e-39 164.5 103 81.6
PSO067G0004 Papaver somniferum HOM05D007328 ORTHO05D009246 2.9e-38 161.8 102 79.4
GSVIVG01007592001 Vitis vinifera HOM05D007328 ORTHO05D009246 2.9e-38 161.8 99 84.8
Haze_07631 Corylus avellana HOM05D007328 ORTHO05D009246 6.4e-38 160.6 103 83.5
RcHm_v2.0_Chr7g0191941 Rosa chinensis HOM05D007328 ORTHO05D009246 8.3e-38 160.2 100 85.0
Prupe.5G161600 Prunus persica HOM05D007328 ORTHO05D009246 1.1e-37 159.8 102 79.4
Ciclev10022963m.g Citrus clementina HOM05D007328 ORTHO05D009246 5.4e-37 157.5 107 78.5
QL10p005926 Quercus lobata HOM05D007328 ORTHO05D009246 7.0e-37 157.1 100 81.0
FAN18G0524 Fragaria x ananassa HOM05D007328 ORTHO05D009246 1.2e-36 156.4 102 83.3
Aqoxy5G03651 Aquilegia oxysepala HOM05D007328 ORTHO05D009246 2.1e-36 155.6 100 79.0
CANSAT80G1532 Cannabis sativa HOM05D007328 ORTHO05D009246 4.6e-36 154.5 101 77.2
FvH4_5g06690 Fragaria vesca HOM05D007328 ORTHO05D009246 4.6e-36 154.5 102 82.4
Rhsim12G0170200 Rhododendron simsii HOM05D007328 ORTHO05D009246 2.3e-35 152.1 101 79.2
DCAR_007459 Daucus carota HOM05D007328 ORTHO05D009246 3.0e-35 151.8 103 74.8
FAN04G3262 Fragaria x ananassa HOM05D007328 ORTHO05D009246 3.0e-35 151.8 102 81.4
FAN13G1360 Fragaria x ananassa HOM05D007328 ORTHO05D009246 3.0e-35 151.8 102 80.4
PSO063G4259 Papaver somniferum HOM05D007328 ORTHO05D009246 3.9e-35 151.4 96 80.2
Sed0026647 Sechium edule HOM05D007328 ORTHO05D009246 3.9e-35 151.4 102 74.5
ClCG06G017550 Citrullus lanatus HOM05D007328 ORTHO05D009246 3.3e-34 148.3 102 74.5
Duzib205G1420 Durio zibethinus HOM05D007328 ORTHO05D009246 4.3e-34 147.9 102 78.4
ECA246G4123 Erigeron canadensis HOM05D007328 ORTHO05D009246 7.3e-34 147.1 103 70.9
PGSC0003DMG400015227 Solanum tuberosum HOM05D007328 ORTHO05D009246 9.5e-34 146.7 102 74.5
PGR044G2544 Punica granatum HOM05D007328 ORTHO05D009246 1.6e-33 146.0 103 75.7
Solyc03g111790.4 Solanum lycopersicum HOM05D007328 ORTHO05D009246 2.1e-33 145.6 102 73.5
Sopen03g030890 Solanum pennellii HOM05D007328 ORTHO05D009246 2.1e-33 145.6 102 73.5
Nitab4.5_0003542g0010 Nicotiana tabacum HOM05D007328 ORTHO05D009246 3.6e-33 144.8 102 72.5
Carub.0002s1493 Capsella rubella HOM05D007328 ORTHO05D009246 4.7e-33 144.4 101 75.2
Hma1.2p1_2431F.1_g322030 Hydrangea macrophylla HOM05D007328 ORTHO05D009246 4.7e-33 144.4 100 78.0
AL2G39190 Arabidopsis lyrata HOM05D007328 ORTHO05D009246 6.2e-33 144.1 101 74.3
AT1G78790 Arabidopsis thaliana HOM05D007328 ORTHO05D009246 6.2e-33 144.1 101 75.2
Sp5g33820 Schrenkiella parvula HOM05D007328 ORTHO05D009246 6.2e-33 144.1 101 75.2
Lsat_1_v5_gn_5_12821 Lactuca sativa HOM05D007328 ORTHO05D009246 8.1e-33 143.7 103 70.9
Nitab4.5_0000510g0070 Nicotiana tabacum HOM05D007328 ORTHO05D009246 1.1e-32 143.3 102 72.5
Hund05612 Selenicereus undatus HOM05D007328 ORTHO05D009246 1.1e-32 143.3 105 69.5
Lsat_1_v5_gn_3_90700 Lactuca sativa HOM05D007328 ORTHO05D009246 1.4e-32 142.9 103 71.8
Ah.08g218420 Amaranthus hybridus HOM05D007328 ORTHO05D009246 1.8e-32 142.5 104 71.2
BcaB03g16036 Brassica carinata HOM05D004141 ORTHO05D005416 1.8e-32 142.5 101 74.3
CAN.G126.95 Capsicum annuum HOM05D007328 ORTHO05D009246 1.8e-32 142.5 102 72.5
TWI23G0848 Tripterygium wilfordii HOM05D007328 ORTHO05D009246 2.3e-32 142.1 100 75.0
BcaC08g47455 Brassica carinata HOM05D007328 ORTHO05D009246 5.2e-32 141.0 101 73.3
A07p44000 Brassica napus HOM05D004141 ORTHO05D005416 5.2e-32 141.0 101 73.3
C06p52680 Brassica napus HOM05D004141 ORTHO05D005416 5.2e-32 141.0 101 73.3
BraA07t31907Z Brassica rapa HOM05D007328 ORTHO05D009246 5.2e-32 141.0 101 73.3
CARHR072340 Cardamine hirsuta HOM05D007328 ORTHO05D009246 6.8e-32 140.6 103 71.8
Potri.012G090600 Populus trichocarpa HOM05D007328 ORTHO05D009246 6.8e-32 140.6 103 72.8
Duzib068G0271 Durio zibethinus HOM05D007328 ORTHO05D009246 8.9e-32 140.2 100 74.0
FAN08G2248 Fragaria x ananassa HOM05D007328 ORTHO05D009246 2.6e-31 138.7 119 68.1
Gohir.D12G189600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 2.6e-31 138.7 103 73.8
CsaV3_1G000900 Cucumis sativus L. HOM05D007328 ORTHO05D009246 3.4e-31 138.3 105 69.5
Cc04_g10870 Coffea canephora HOM05D007328 ORTHO05D009246 4.4e-31 137.9 103 71.8
Gorai.008G203400 Gossypium raimondii HOM05D007328 ORTHO05D009246 7.5e-31 137.1 103 72.8
SGA_v2.0_scaffold7G04170 Striga asiatica HOM05D007328 ORTHO05D009246 7.5e-31 137.1 102 70.6
THA.LOC104809276 Tarenaya hassleriana HOM05D007328 ORTHO05D009246 7.5e-31 137.1 99 73.7
HPP92_017655 Vanilla planifolia HOM05D007328 ORTHO05D009246 7.5e-31 137.1 103 68.9
HanXRQChr08g0235201 Helianthus annuus HOM05D007328 ORTHO05D009246 9.9e-31 136.7 99 70.7
COL.COLO4_19806 Corchorus olitorius HOM05D007328 ORTHO05D009246 1.3e-30 136.3 103 75.7
Gohir.A12G186600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.3e-30 136.3 102 73.5
Thecc.03G118600 Theobroma cacao HOM05D007328 ORTHO05D009246 1.7e-30 136.0 102 72.5
Ca_19431_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 3.7e-30 134.8 102 70.6
Lj4g0027684 Lotus japonicus HOM05D007328 ORTHO05D009246 3.7e-30 134.8 102 70.6
Migut.D02033 Erythranthe guttata HOM05D007328 ORTHO05D009246 1.1e-29 133.3 102 68.6
MSTRG.4340 Avicennia marina HOM05D007328 ORTHO05D009246 1.9e-29 132.5 104 69.2
arahy.Tifrunner.gnm1.ann1.RLPB8M Arachis hypogaea HOM05D007328 ORTHO05D009246 4.1e-29 131.3 102 66.7
Medtr4g104430 Medicago truncatula HOM05D007328 ORTHO05D009246 4.1e-29 131.3 102 67.6
MELO3C026242.2 Cucumis melo HOM05D007328 ORTHO05D009246 1.2e-28 129.8 105 69.5
arahy.Tifrunner.gnm1.ann1.VT7US1 Arachis hypogaea HOM05D007328 ORTHO05D009246 2.7e-28 128.6 97 69.1
Glyma.05G043400 Glycine max HOM05D007328 ORTHO05D009246 2.7e-28 128.6 102 68.6
Gorai.006G269700 Gossypium raimondii HOM05D007328 ORTHO05D009246 1.0e-27 126.7 101 67.3
Gohir.A09G244400 Gossypium hirsutum HOM05D007328 ORTHO05D009246 2.3e-27 125.6 101 67.3
TPR.G37571 Trifolium pratense HOM05D007328 ORTHO05D009246 2.3e-27 125.6 104 63.5
Phvul.003G206900 Phaseolus vulgaris HOM05D007328 ORTHO05D009246 3.9e-27 124.8 102 66.7
Os04g0481500 Oryza sativa ssp. japonica HOM05D007328 ORTHO05D009246 5.1e-27 124.4 103 68.0
Glyma.17G125900 Glycine max HOM05D007328 ORTHO05D009246 6.6e-27 124.0 102 65.7
SHI17354 Sapria himalayana HOM05D007328 ORTHO05D009246 1.1e-26 123.2 102 64.7
Gohir.D09G245301 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.5e-26 122.9 101 65.3
Lalb_Chr07g0183141 Lupinus albus HOM05D007328 ORTHO05D009246 1.5e-26 122.9 102 66.7
SalBow6G3374 Salvia bowleyana HOM05D007328 ORTHO05D009246 5.6e-26 120.9 96 65.6
CSS0030634 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 6.2e-25 117.5 106 63.2
Sabra12G0065400 Salix brachista HOM05D007328 ORTHO05D009246 1.2e-23 113.2 81 75.3
Nn3g16640 Nelumbo nucifera HOM05D007328 ORTHO05D009246 3.4e-23 111.7 69 79.7
CDE02G4603 Ceratophyllum demersum HOM05D007328 ORTHO05D009246 7.6e-23 110.5 114 55.3
Psat4g062040 Pisum sativum HOM05D007328 ORTHO05D009246 9.9e-23 110.2 89 66.3
AagrBONN_evm.TU.Sc2ySwM_369.482 Anthoceros agrestis HOM05D007328 ORTHO05D009246 3.8e-22 108.2 107 54.2
unitig_62.g23226 Utricularia gibba HOM05D007328 ORTHO05D009246 3.8e-22 108.2 100 58.0
vmacro16689 Vaccinium macrocarpon HOM05D007328 ORTHO05D009246 4.9e-22 107.8 64 87.5
C03p92780 Brassica napus HOM05D007328 ORTHO05D009246 6.4e-22 107.5 113 58.4
BolC6t40286H Brassica oleracea HOM05D007328 ORTHO05D009246 6.4e-22 107.5 81 71.6
Manes.06G112300 Manihot esculenta HOM05D007328 ORTHO05D009246 9.2e-21 103.6 90 63.3
Pp3c15_7370 Physcomitrium patens HOM05D007328 ORTHO05D009246 1.6e-20 102.8 106 53.8
Aa31LG4G2240 Aethionema arabicum HOM05D007328 ORTHO05D009246 2.7e-20 102.1 67 79.1
QL10p005934 Quercus lobata HOM05D007328 ORTHO05D009246 1.0e-19 100.1 64 81.2
Ca_30674_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 1.3e-19 99.8 67 79.1
AUR62001234 Chenopodium quinoa HOM05D007328 ORTHO05D009246 8.7e-19 97.1 72 76.4
Mapoly0166s0013 Marchantia polymorpha HOM05D007328 ORTHO05D009246 1.6e-17 92.8 89 56.2
SEGI_23865 Sequoiadendron giganteum HOM05D007328 ORTHO05D009246 2.8e-17 92.0 66 72.7
MBI10_g15972_MAGBIO Magnolia biondii HOM05D007328 ORTHO05D009246 1.1e-16 90.1 65 75.4
Atru.chr9.1808 Acer truncatum HOM05D007328 ORTHO05D009246 1.4e-16 89.7 53 90.6
Actinidia08840 Actinidia chinensis HOM05D007328 ORTHO05D009246 9.0e-16 87.0 50 88.0
ATR0199G045 Amborella trichopoda HOM05D007328 ORTHO05D009246 1.2e-15 86.7 55 83.6
Thhalv10019789m.g Eutrema salsugineum HOM05D007328 ORTHO05D009246 1.5e-15 86.3 52 86.5
ECA233G5563 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.7e-14 82.8 53 84.9
SMO203G0244 Selaginella moellendorffii HOM05D007328 ORTHO05D009246 2.4e-13 79.0 53 75.5
CSS0039715 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 5.6e-10 67.8 39 84.6
MCO11G116 Micromonas commoda HOM05D007328 ORTHO05D009246 4.5e-07 58.2 104 35.6
SMO203G0278 Selaginella moellendorffii HOM05D000001 ORTHO05D375656 4.9e-06 54.7 62 50.0


User provided reference genes

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