Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 7.7e-59 230.3 121 100.0
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 9.4e-49 196.8 120 86.7
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 2.1e-48 195.7 121 84.3
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 3.0e-47 191.8 121 81.0
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 3.0e-47 191.8 121 81.0
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 3.0e-47 191.8 121 81.8
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 3.0e-47 191.8 121 81.8
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 6.8e-47 190.7 117 82.9
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 1.5e-46 189.5 121 80.2
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 1.5e-46 189.5 121 81.0
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.5e-46 189.5 117 83.8
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 3.4e-46 188.3 120 83.3
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 3.4e-46 188.3 120 83.3
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 5.7e-46 187.6 115 83.5
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 1.3e-45 186.4 117 82.1
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 2.2e-45 185.7 117 81.2
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 1.4e-44 183.0 119 79.8
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 1.8e-44 182.6 120 79.2
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 3.1e-44 181.8 121 77.7
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 3.1e-44 181.8 110 83.6
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.1e-44 181.4 120 78.3
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.1e-44 181.4 120 78.3
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 4.1e-44 181.4 120 78.3
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 1.2e-43 179.9 114 81.6
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 1.6e-43 179.5 120 77.5
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 1.6e-43 179.5 114 81.6
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 1.6e-43 179.5 114 81.6
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 2.7e-43 178.7 123 77.2
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 4.5e-43 177.9 119 79.0
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 4.5e-43 177.9 115 78.3
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 4.5e-43 177.9 118 77.1
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 4.5e-43 177.9 120 77.5
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 5.9e-43 177.6 113 80.5
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 5.9e-43 177.6 118 76.3
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 5.9e-43 177.6 112 83.0
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 7.7e-43 177.2 121 78.5
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 1.0e-42 176.8 118 76.3
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.7e-42 176.0 120 76.7
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 2.2e-42 175.6 121 77.7
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 2.2e-42 175.6 121 77.7
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 2.2e-42 175.6 115 77.4
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 3.8e-42 174.9 112 78.6
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 5.0e-42 174.5 124 74.2
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 6.5e-42 174.1 119 74.8
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 8.5e-42 173.7 115 77.4
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 1.1e-41 173.3 119 75.6
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 1.5e-41 172.9 121 75.2
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 4.2e-41 171.4 114 76.3
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 4.2e-41 171.4 117 76.1
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 4.2e-41 171.4 108 77.8
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 4.2e-41 171.4 119 73.1
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 5.5e-41 171.0 120 71.7
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 5.5e-41 171.0 119 73.9
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 7.2e-41 170.6 113 76.1
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 9.5e-41 170.2 124 72.6
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 9.5e-41 170.2 110 80.0
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 1.2e-40 169.9 109 79.8
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 1.2e-40 169.9 120 73.3
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 1.6e-40 169.5 114 74.6
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 2.8e-40 168.7 111 77.5
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 4.7e-40 167.9 119 73.9
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 6.1e-40 167.5 110 78.2
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 1.4e-39 166.4 112 75.0
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 4.0e-39 164.9 121 71.9
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 4.0e-39 164.9 116 70.7
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 2.2e-37 159.1 112 71.4
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 1.4e-36 156.4 124 66.9
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 2.4e-36 155.6 107 72.0
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 4.1e-36 154.8 121 65.3
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 1.6e-35 152.9 119 65.5
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 4.5e-35 151.4 119 64.7
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 1.0e-34 150.2 117 67.5
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 1.7e-34 149.4 104 75.0
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 1.7e-34 149.4 119 64.7
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.3e-34 149.1 106 71.7
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 3.8e-34 148.3 119 67.2
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 8.6e-34 147.1 94 77.7
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 9.5e-33 143.7 109 65.1
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.6e-32 142.9 117 66.7
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 1.6e-32 142.9 95 75.8
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 2.1e-32 142.5 116 65.5
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 3.6e-32 141.7 108 63.9
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 3.6e-32 141.7 108 63.0
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 4.7e-32 141.4 108 63.0
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 6.1e-32 141.0 106 69.8
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 8.0e-32 140.6 112 67.0
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 1.0e-31 140.2 115 64.3
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 3.4e-30 135.2 110 64.5
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 4.9e-29 131.3 76 86.8
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 1.4e-28 129.8 77 85.7
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 1.4e-28 129.8 78 84.6
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 2.4e-28 129.0 92 71.7
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 2.0e-27 125.9 108 59.3
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 2.7e-27 125.6 107 61.7
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 3.5e-27 125.2 122 57.4
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 4.6e-27 124.8 121 57.0
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.0e-26 123.6 76 81.6
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.0e-26 123.6 76 81.6
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 2.3e-26 122.5 96 64.6
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 5.0e-26 121.3 121 55.4
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 1.1e-25 120.2 122 56.6
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 3.3e-25 118.6 117 53.8
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 7.3e-25 117.5 91 68.1
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.1e-24 115.9 117 57.3
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.6e-24 115.2 117 57.3
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 6.2e-24 114.4 117 56.4
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 9.8e-22 107.1 114 44.7
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 3.7e-21 105.1 112 49.1
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 4.9e-21 104.8 117 53.8
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 1.4e-20 103.2 112 50.0
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 1.4e-20 103.2 109 51.4
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 1.9e-20 102.8 108 50.0
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 4.1e-20 101.7 75 65.3
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 4.1e-20 101.7 75 65.3
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 4.1e-20 101.7 73 67.1
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 9.2e-20 100.5 90 63.3
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 1.2e-19 100.1 77 62.3
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 2.0e-19 99.4 71 67.6
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 4.6e-19 98.2 59 81.4
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 4.6e-19 98.2 59 81.4
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 6.0e-19 97.8 108 48.1
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 1.0e-18 97.1 71 66.2
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 3.0e-18 95.5 112 45.5
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 8.6e-18 94.0 106 43.4
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 1.4e-15 86.7 72 51.4
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 1.5e-14 83.2 100 41.0
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 8.3e-13 77.4 62 62.9
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 2.5e-09 65.9 43 74.4
FAN03G1360 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.1e-08 62.8 52 55.8
FAN06G1951 Fragaria x ananassa HOM05D006288 ORTHO05D007416 4.4e-06 55.1 106 37.7


User provided reference genes

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