Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2200 Trochodendron aralioides HOM05D007261 ORTHO05D009163 1.5e-139 499.6 263 100.0
Nn4g22065 Nelumbo nucifera HOM05D007261 ORTHO05D009163 5.1e-108 394.8 259 79.2
Dinv04437 Davidia involucrata HOM05D007261 ORTHO05D009163 2.7e-101 372.5 260 75.8
Aqoxy5G04229 Aquilegia oxysepala HOM05D007261 ORTHO05D009163 1.1e-97 360.5 252 74.2
Cfa009475 Carpinus fangiana HOM05D007261 ORTHO05D009163 1.4e-94 350.1 252 72.2
Manes.09G172600 Manihot esculenta HOM05D007261 ORTHO05D009163 7.2e-94 347.8 243 74.9
GSVIVG01001121001 Vitis vinifera HOM05D007261 ORTHO05D009163 7.2e-94 347.8 240 76.2
PSO017G6922 Papaver somniferum HOM05D007261 ORTHO05D009163 1.6e-93 346.7 230 74.8
Hma1.2p1_0738F.1_g210990 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 2.7e-93 345.9 253 71.5
Potri.001G070800 Populus trichocarpa HOM05D007261 ORTHO05D009163 3.6e-93 345.5 244 71.7
Cc11_g14850 Coffea canephora HOM05D007261 ORTHO05D009163 4.7e-93 345.1 268 67.9
CsaV3_3G043490 Cucumis sativus L. HOM05D007261 ORTHO05D009163 6.1e-93 344.7 256 73.0
PSO478G2703 Papaver somniferum HOM05D007261 ORTHO05D009163 1.0e-92 344.0 230 74.8
Sabra01G0049700 Salix brachista HOM05D007261 ORTHO05D009163 1.8e-92 343.2 243 71.2
Rhsim12G0015700 Rhododendron simsii HOM05D007261 ORTHO05D009163 6.7e-92 341.3 248 71.4
MELO3C026753.2 Cucumis melo HOM05D007261 ORTHO05D009163 2.0e-91 339.7 256 71.9
RcHm_v2.0_Chr4g0428371 Rosa chinensis HOM05D007261 ORTHO05D009163 2.6e-91 339.3 237 73.4
Prupe.1G211100 Prunus persica HOM05D007261 ORTHO05D009163 3.3e-91 339.0 244 70.9
QL03p048277 Quercus lobata HOM05D007261 ORTHO05D009163 4.4e-91 338.6 242 71.5
Sed0025955 Sechium edule HOM05D007261 ORTHO05D009163 9.7e-91 337.4 256 70.7
MD16G1145000 Malus domestica HOM05D007261 ORTHO05D009163 1.3e-90 337.0 249 71.1
FvH4_4g22120 Fragaria vesca HOM05D007261 ORTHO05D009163 2.8e-90 335.9 225 75.6
PGR119G1620 Punica granatum HOM05D007261 ORTHO05D009163 4.8e-90 335.1 253 69.6
FAN12G3746 Fragaria x ananassa HOM05D007261 ORTHO05D009163 8.2e-90 334.3 225 75.6
FAN07G0598 Fragaria x ananassa HOM05D007261 ORTHO05D009163 1.8e-89 333.2 233 72.5
Cpa.g.sc38.54 Carica papaya HOM05D007261 ORTHO05D009163 3.1e-89 332.4 259 67.6
Duzib264G0686 Durio zibethinus HOM05D007261 ORTHO05D009163 4.1e-89 332.0 264 68.6
FAN17G2458 Fragaria x ananassa HOM05D007261 ORTHO05D009163 4.1e-89 332.0 248 69.8
vmacro01006 Vaccinium macrocarpon HOM05D007261 ORTHO05D009163 5.3e-89 331.6 251 70.5
Nitab4.5_0005286g0010 Nicotiana tabacum HOM05D007261 ORTHO05D009163 2.0e-88 329.7 257 68.9
MD13G1134400 Malus domestica HOM05D007261 ORTHO05D009163 3.5e-88 328.9 249 69.5
ClCG10G013090 Citrullus lanatus HOM05D007261 ORTHO05D009163 7.7e-88 327.8 256 71.5
Thecc.01G239300 Theobroma cacao HOM05D007261 ORTHO05D009163 7.7e-88 327.8 263 67.3
Eucgr.J01661 Eucalyptus grandis HOM05D007261 ORTHO05D009163 1.0e-87 327.4 250 68.8
Oeu021934.1 Olea europaea HOM05D007261 ORTHO05D009163 1.7e-87 326.6 254 67.7
Hund12712 Selenicereus undatus HOM05D007261 ORTHO05D009163 1.7e-87 326.6 248 69.8
Atru.chr12.1480 Acer truncatum HOM05D007261 ORTHO05D009163 2.2e-87 326.2 243 68.7
AUR62003485 Chenopodium quinoa HOM05D007261 ORTHO05D009163 1.9e-86 323.2 248 69.4
Ciclev10029098m.g Citrus clementina HOM05D007261 ORTHO05D009163 1.9e-86 323.2 236 70.8
CSS0010700 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 5.5e-86 321.6 251 67.7
TWI18G1332 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 5.5e-86 321.6 251 68.5
AUR62017794 Chenopodium quinoa HOM05D007261 ORTHO05D009163 9.4e-86 320.9 248 69.0
Gohir.D11G063500 Gossypium hirsutum HOM05D007261 ORTHO05D009163 9.4e-86 320.9 236 70.3
Gorai.007G068700 Gossypium raimondii HOM05D007261 ORTHO05D009163 1.2e-85 320.5 236 69.9
CSS0041929 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 2.7e-85 319.3 251 67.3
Peaxi162Scf01167g00120 Petunia axillaris HOM05D007261 ORTHO05D009163 2.7e-85 319.3 237 71.3
Gohir.A11G059400 Gossypium hirsutum HOM05D007261 ORTHO05D009163 3.6e-85 318.9 236 69.5
HPP92_020118 Vanilla planifolia HOM05D007261 ORTHO05D009163 3.6e-85 318.9 220 73.6
PGSC0003DMG400002189 Solanum tuberosum HOM05D007261 ORTHO05D009163 6.1e-85 318.2 254 66.9
CAN.G624.13 Capsicum annuum HOM05D007261 ORTHO05D009163 2.3e-84 316.2 260 66.9
arahy.Tifrunner.gnm1.ann1.EWZS38 Arachis hypogaea HOM05D007261 ORTHO05D009163 3.0e-84 315.8 238 68.5
arahy.Tifrunner.gnm1.ann1.X3R9N8 Arachis hypogaea HOM05D007261 ORTHO05D009163 3.0e-84 315.8 238 68.5
EL10Ac6g15388 Beta vulgaris HOM05D007261 ORTHO05D009163 3.0e-84 315.8 248 69.0
CDE05G0176 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 5.2e-84 315.1 248 66.1
Solyc11g040130.2 Solanum lycopersicum HOM05D007261 ORTHO05D009163 1.2e-83 313.9 231 70.1
TWI36G0866 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 2.0e-83 313.2 236 68.6
ATR0582G128 Amborella trichopoda HOM05D007261 ORTHO05D009163 3.3e-83 312.4 234 67.5
Sopen11g017340 Solanum pennellii HOM05D007261 ORTHO05D009163 5.7e-83 311.6 231 69.7
SalBow2G2703 Salvia bowleyana HOM05D007261 ORTHO05D009163 1.3e-82 310.5 287 62.4
HanXRQChr06g0175371 Helianthus annuus HOM05D007261 ORTHO05D009163 3.7e-82 308.9 231 69.7
AT1G44960 Arabidopsis thaliana HOM05D007261 ORTHO05D009163 1.4e-81 307.0 231 69.3
Aa31LG7G10040 Aethionema arabicum HOM05D007261 ORTHO05D009163 2.4e-81 306.2 229 67.7
AL1G52610 Arabidopsis lyrata HOM05D007261 ORTHO05D009163 2.4e-81 306.2 254 61.8
Carub.0001s3543 Capsella rubella HOM05D007261 ORTHO05D009163 3.1e-81 305.8 235 68.9
Glyma.18G298600 Glycine max HOM05D007261 ORTHO05D009163 3.1e-81 305.8 225 70.2
CANSAT01G0240 Cannabis sativa HOM05D007261 ORTHO05D009163 4.1e-81 305.4 237 65.4
CARHR036160 Cardamine hirsuta HOM05D007261 ORTHO05D009163 4.1e-81 305.4 231 67.1
Migut.K01136 Erythranthe guttata HOM05D007261 ORTHO05D009163 7.0e-81 304.7 248 64.9
Lalb_Chr04g0257321 Lupinus albus HOM05D007261 ORTHO05D009163 7.0e-81 304.7 228 67.1
Ah.03g147240 Amaranthus hybridus HOM05D007261 ORTHO05D009163 9.1e-81 304.3 242 66.1
Phvul.008G004000 Phaseolus vulgaris HOM05D007261 ORTHO05D009163 1.6e-80 303.5 225 67.1
BcaB07g33898 Brassica carinata HOM05D007261 ORTHO05D009163 2.0e-80 303.1 234 65.8
ECA246G1741 Erigeron canadensis HOM05D007261 ORTHO05D009163 3.5e-80 302.4 227 67.4
Thhalv10011722m.g Eutrema salsugineum HOM05D007261 ORTHO05D009163 3.5e-80 302.4 227 69.2
Lsat_1_v5_gn_3_33201 Lactuca sativa HOM05D007261 ORTHO05D009163 5.9e-80 301.6 206 75.2
Lj1g0023925 Lotus japonicus HOM05D007261 ORTHO05D009163 7.7e-80 301.2 228 66.2
Glyma.08G363400 Glycine max HOM05D007261 ORTHO05D009163 1.3e-79 300.4 224 67.9
BolC6t35245H Brassica oleracea HOM05D007261 ORTHO05D009163 2.9e-79 299.3 248 63.3
THA.LOC104801410 Tarenaya hassleriana HOM05D007261 ORTHO05D009163 2.9e-79 299.3 254 61.8
C06p01120 Brassica napus HOM05D007261 ORTHO05D009163 3.8e-79 298.9 248 63.3
Lj3A1078G18 Lonicera japonica HOM05D007261 ORTHO05D009163 3.8e-79 298.9 224 67.0
Sp1g33800 Schrenkiella parvula HOM05D007261 ORTHO05D009163 3.8e-79 298.9 223 67.7
Psat3g206640 Pisum sativum HOM05D007261 ORTHO05D009163 6.5e-79 298.1 233 65.2
BraA10t42964Z Brassica rapa HOM05D007261 ORTHO05D009163 8.5e-79 297.7 251 63.7
TPR.G9720 Trifolium pratense HOM05D007261 ORTHO05D009163 1.5e-78 297.0 225 65.8
A10p07140 Brassica napus HOM05D007261 ORTHO05D009163 3.2e-78 295.8 251 63.3
Ca_04086_v3 Cicer arietinum L. HOM05D007261 ORTHO05D009163 5.5e-78 295.0 235 63.8
Sc17g0001500 Simmondsia chinensis HOM05D007261 ORTHO05D009163 9.4e-78 294.3 195 74.4
Medtr7g006790 Medicago truncatula HOM05D007261 ORTHO05D009163 2.7e-77 292.7 234 63.7
Medtr7g006800 Medicago truncatula HOM05D007261 ORTHO05D009163 2.7e-77 292.7 234 63.7
Haze_12532 Corylus avellana HOM05D007261 ORTHO05D009163 8.0e-77 291.2 394 45.2
Zm00001eb197910 Zea mays HOM05D007261 ORTHO05D009163 4.4e-75 285.4 253 58.9
CiPaw.05G097700 Carya illinoinensis HOM05D007261 ORTHO05D009163 7.5e-75 284.6 252 62.7
unitig_26.g10437 Utricularia gibba HOM05D000361 ORTHO05D007482 7.0e-73 278.1 239 59.8
Os11g0537300 Oryza sativa ssp. japonica HOM05D007261 ORTHO05D009163 1.6e-72 276.9 244 58.6
VMungo1383G1401 Vigna mungo HOM05D007261 ORTHO05D009163 2.0e-72 276.6 198 69.2
SEGI_21849 Sequoiadendron giganteum HOM05D007261 ORTHO05D009163 5.4e-65 251.9 194 63.4
Pp3c19_21680 Physcomitrium patens HOM05D007261 ORTHO05D009163 7.5e-59 231.5 229 52.4
AagrBONN_evm.TU.Sc2ySwM_228.5286 Anthoceros agrestis HOM05D007261 ORTHO05D009163 9.8e-59 231.1 236 51.7
HPP92_020128 Vanilla planifolia HOM05D007261 ORTHO05D009163 2.4e-57 226.5 191 66.0
SMO351G0136 Selaginella moellendorffii HOM05D007261 ORTHO05D009163 3.2e-57 226.1 202 57.4
Mapoly0073s0041 Marchantia polymorpha HOM05D007261 ORTHO05D009163 1.5e-54 217.2 239 48.1
Nitab4.5_0002113g0010 Nicotiana tabacum HOM05D000361 ORTHO05D007482 7.5e-51 204.9 158 70.3
BcaC08g42890 Brassica carinata HOM05D007261 ORTHO05D009163 9.2e-41 171.4 137 62.0
CBR_g44525 Chara braunii HOM05D007261 ORTHO05D009163 4.6e-40 169.1 237 42.2
Potri.003G159901 Populus trichocarpa HOM05D007261 ORTHO05D009163 1.1e-36 157.9 98 78.6
CDE05G1764 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 3.4e-35 152.9 127 59.8
Actinidia30573 Actinidia chinensis HOM05D007261 ORTHO05D009163 5.4e-33 145.6 101 71.3
Hma1.2p1_0738F.1_g211000 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 3.5e-24 116.3 96 67.7
PRCOL_00004129 Prasinoderma coloniale HOM05D007261 ORTHO05D009163 1.4e-17 94.4 259 32.0
HanXRQChr13g0417201 Helianthus annuus HOM05D001082 ORTHO05D001538 2.3e-07 60.5 157 31.8
Cre06.g262000 Chlamydomonas reinhardtii HOM05D001530 ORTHO05D003676 1.9e-06 57.4 146 26.0


User provided reference genes

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