Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2189 Trochodendron aralioides HOM05D018317 ORTHO05D023175 2.1e-135 485.7 246 100.0
TAR625G1329 Trochodendron aralioides HOM05D018317 ORTHO05D023175 3.3e-56 222.6 182 70.3
TAR381G1159 Trochodendron aralioides HOM05D018317 ORTHO05D023175 6.4e-44 181.8 121 78.5
TAR623G0916 Trochodendron aralioides HOM05D018317 ORTHO05D023175 3.0e-41 172.9 137 69.3
TAR383G0282 Trochodendron aralioides HOM05D018317 ORTHO05D023175 1.5e-37 160.6 102 82.4
TAR636G0486 Trochodendron aralioides HOM05D018317 ORTHO05D414556 5.6e-32 142.1 114 69.3
TAR625G0009 Trochodendron aralioides HOM05D018317 ORTHO05D023175 6.2e-31 138.7 100 75.0
Aqoxy4G01122 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 2.1e-23 113.6 233 33.5
Aqoxy3G01675 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 9.9e-21 104.8 248 32.7
TAR636G3535 Trochodendron aralioides HOM05D004716 ORTHO05D005646 4.2e-19 99.4 61 82.0
Dinv29316 Davidia involucrata HOM05D000001 ORTHO05D000003 1.6e-18 97.4 308 28.9
Lj5C596T3 Lonicera japonica HOM05D000034 ORTHO05D000037 1.0e-17 94.7 298 27.9
Gohir.D05G075500 Gossypium hirsutum HOM05D000665 ORTHO05D000140 3.9e-17 92.8 298 26.5
TAR381G0707 Trochodendron aralioides HOM05D001650 ORTHO05D001592 9.6e-16 88.2 60 73.3
QL01p016365 Quercus lobata HOM05D000665 ORTHO05D000140 1.8e-14 84.0 291 24.1
Nn2g14680 Nelumbo nucifera HOM05D000665 ORTHO05D000140 3.1e-14 83.2 298 25.5
Thecc.09G253400 Theobroma cacao HOM05D000665 ORTHO05D000140 6.9e-14 82.0 302 24.5
COL.COLO4_06628 Corchorus olitorius HOM05D000665 ORTHO05D000140 9.0e-14 81.6 300 24.0
Phvul.006G016600 Phaseolus vulgaris HOM05D000665 ORTHO05D000140 5.8e-13 79.0 293 24.2
Aqoxy7G02014 Aquilegia oxysepala HOM05D000665 ORTHO05D000140 9.9e-13 78.2 213 26.3
Rhsim13G0204800 Rhododendron simsii HOM05D000665 ORTHO05D000140 2.9e-12 76.6 300 25.7
Glyma.07G234900 Glycine max HOM05D000665 ORTHO05D000140 1.9e-11 73.9 306 22.5
Lalb_Chr15g0080181 Lupinus albus HOM05D000665 ORTHO05D000140 2.4e-11 73.6 294 23.1
Cc01_g06590 Coffea canephora HOM05D000665 ORTHO05D000140 4.2e-11 72.8 183 32.2
Dinv13787 Davidia involucrata HOM05D000034 ORTHO05D000037 3.5e-10 69.7 183 30.6
VMungo0540G2239 Vigna mungo HOM05D000665 ORTHO05D000140 3.5e-10 69.7 273 26.7
Lj6g0024114 Lotus japonicus HOM05D000665 ORTHO05D000140 7.9e-10 68.6 292 23.6
Ca_02662_v3 Cicer arietinum L. HOM05D000665 ORTHO05D000140 1.3e-09 67.8 313 21.7
Glyma.02G156600 Glycine max HOM05D000665 ORTHO05D000140 5.1e-09 65.9 290 21.4
Lj7A675G36 Lonicera japonica HOM05D000665 ORTHO05D000140 1.5e-08 64.3 190 29.5
Nn1g03604 Nelumbo nucifera HOM05D042748 ORTHO05D025800 1.9e-08 63.9 151 29.1
vmacro12400 Vaccinium macrocarpon HOM05D000665 ORTHO05D000140 1.9e-08 63.9 311 25.1
PSO541G0575 Papaver somniferum HOM05D000665 ORTHO05D000140 2.5e-08 63.5 303 23.8
Medtr3g045460 Medicago truncatula HOM05D000665 ORTHO05D000140 7.4e-08 62.0 202 25.2
TPR.G11842 Trifolium pratense HOM05D000001 ORTHO05D000003 7.4e-08 62.0 205 24.9
Sed0022741 Sechium edule HOM05D000665 ORTHO05D000140 1.3e-07 61.2 184 28.8
TAR629G1433 Trochodendron aralioides HOM05D000558 ORTHO05D003075 4.8e-07 59.3 155 32.3
Lj4C833G3 Lonicera japonica HOM05D000665 ORTHO05D000140 8.1e-07 58.5 132 30.3
FAN26G1288 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.4e-06 57.8 197 26.4
Hma1.2p1_1819F.1_g304060 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 1.4e-06 57.8 177 31.6
Hma1.2p1_0619F.1_g190440 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 1.8e-06 57.4 230 25.2
TAR374G1616 Trochodendron aralioides HOM05D041173 ORTHO05D002688 1.8e-06 57.4 173 25.4
Nn3g19280 Nelumbo nucifera HOM05D000665 ORTHO05D000140 2.4e-06 57.0 193 26.9
Glyma.16G081300 Glycine max HOM05D000665 ORTHO05D000140 3.1e-06 56.6 290 20.3
Nn1g01996 Nelumbo nucifera HOM05D000665 ORTHO05D000140 3.1e-06 56.6 191 26.2
TPR.G21227 Trifolium pratense HOM05D000665 ORTHO05D000140 3.1e-06 56.6 121 33.1
EL10Ac4g08803 Beta vulgaris HOM05D009145 ORTHO05D000140 4.0e-06 56.2 266 24.4
Ciclev10006825m.g Citrus clementina HOM05D008011 ORTHO05D000277 5.3e-06 55.8 186 26.3
Duzib138G0087 Durio zibethinus HOM05D000665 ORTHO05D000140 6.9e-06 55.5 89 36.0
Hma1.2p1_1121F.1_g259230 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.0e-06 55.1 229 26.2
PSO801G0061 Papaver somniferum HOM05D000034 ORTHO05D000037 9.0e-06 55.1 294 23.5
Psat0s3985g0040 Pisum sativum HOM05D000665 ORTHO05D000140 9.0e-06 55.1 110 34.5
Solyc10g018645.1 Solanum lycopersicum HOM05D003487 ORTHO05D000140 9.0e-06 55.1 185 27.6


User provided reference genes

Program Settings