Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2182 Trochodendron aralioides HOM05D006885 ORTHO05D008606 2.1e-39 165.2 84 100.0
Sabra16G0207500 Salix brachista HOM05D006885 ORTHO05D008606 2.9e-28 128.3 80 78.8
Potri.001G325000 Populus trichocarpa HOM05D006885 ORTHO05D008606 8.3e-28 126.7 80 77.5
TWI75G1759 Tripterygium wilfordii HOM05D006885 ORTHO05D008606 8.3e-28 126.7 83 78.3
Manes.11G080000 Manihot esculenta HOM05D006885 ORTHO05D008606 1.4e-27 125.9 73 86.3
Dinv33305 Davidia involucrata HOM05D006885 ORTHO05D008606 1.9e-27 125.6 83 79.5
Actinidia19564 Actinidia chinensis HOM05D006885 ORTHO05D008606 3.2e-27 124.8 71 87.3
Ciclev10033198m.g Citrus clementina HOM05D006885 ORTHO05D008606 7.0e-27 123.6 69 87.0
Duzib052G0936 Durio zibethinus HOM05D006885 ORTHO05D008606 1.6e-26 122.5 77 83.1
Hma1.2p1_0459F.1_g157320 Hydrangea macrophylla HOM05D006885 ORTHO05D008606 2.0e-26 122.1 76 81.6
Atru.chr11.2397 Acer truncatum HOM05D006885 ORTHO05D008606 2.7e-26 121.7 78 79.5
Manes.04G090052 Manihot esculenta HOM05D006885 ORTHO05D008606 2.7e-26 121.7 73 86.3
Prupe.1G220300 Prunus persica HOM05D006885 ORTHO05D008606 2.7e-26 121.7 78 78.2
Aqoxy5G03235 Aquilegia oxysepala HOM05D006885 ORTHO05D008606 3.5e-26 121.3 80 78.8
CiPaw.06G106900 Carya illinoinensis HOM05D006885 ORTHO05D008606 3.5e-26 121.3 74 83.8
Duzib248G1150 Durio zibethinus HOM05D006885 ORTHO05D008606 6.0e-26 120.6 78 80.8
Dinv25633 Davidia involucrata HOM05D006885 ORTHO05D008606 7.8e-26 120.2 84 76.2
RcHm_v2.0_Chr4g0429451 Rosa chinensis HOM05D006885 ORTHO05D008606 7.8e-26 120.2 61 95.1
Gohir.D04G140400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 2.3e-25 118.6 74 81.1
CiPaw.05G104600 Carya illinoinensis HOM05D006885 ORTHO05D008606 3.9e-25 117.9 78 78.2
Eucgr.B03538 Eucalyptus grandis HOM05D006885 ORTHO05D008606 5.0e-25 117.5 77 77.9
Gohir.A04G101300 Gossypium hirsutum HOM05D006885 ORTHO05D008606 6.6e-25 117.1 68 86.8
Gorai.012G125400 Gossypium raimondii HOM05D006885 ORTHO05D008606 6.6e-25 117.1 68 83.8
MD13G1125100 Malus domestica HOM05D006885 ORTHO05D008606 6.6e-25 117.1 78 75.6
Nn2g15930 Nelumbo nucifera HOM05D006885 ORTHO05D008606 6.6e-25 117.1 74 81.1
FAN07G1762 Fragaria x ananassa HOM05D006885 ORTHO05D008606 8.6e-25 116.7 60 91.7
FAN17G2783 Fragaria x ananassa HOM05D006885 ORTHO05D008606 8.6e-25 116.7 60 91.7
FvH4_4g23120 Fragaria vesca HOM05D006885 ORTHO05D008606 1.1e-24 116.3 74 81.1
FAN12G2334 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.1e-24 116.3 74 81.1
ClCG06G001860 Citrullus lanatus HOM05D006885 ORTHO05D008606 1.5e-24 115.9 61 90.2
Ca_06520_v3 Cicer arietinum L. HOM05D006885 ORTHO05D008606 1.9e-24 115.5 62 90.3
TPR.G15605 Trifolium pratense HOM05D006885 ORTHO05D008606 2.5e-24 115.2 74 79.7
MD16G1125900 Malus domestica HOM05D006885 ORTHO05D008606 4.3e-24 114.4 78 73.1
Cfa008736 Carpinus fangiana HOM05D000120 ORTHO05D000068 5.6e-24 114.0 61 90.2
ECA232G0525 Erigeron canadensis HOM05D006885 ORTHO05D008606 7.3e-24 113.6 75 74.7
LjContig00312_ERROPOS870357g0004846 Lotus japonicus HOM05D006885 ORTHO05D008606 7.3e-24 113.6 61 90.2
Sed0025765 Sechium edule HOM05D006885 ORTHO05D008606 7.3e-24 113.6 61 85.2
CANSAT01G1896 Cannabis sativa HOM05D006885 ORTHO05D008606 9.5e-24 113.2 61 86.9
CsaV3_6G007910 Cucumis sativus L. HOM05D006885 ORTHO05D008606 9.5e-24 113.2 61 88.5
Lsat_1_v5_gn_4_1780 Lactuca sativa HOM05D006885 ORTHO05D008606 1.6e-23 112.5 58 89.7
Peaxi162Scf00962g00024 Petunia axillaris HOM05D006885 ORTHO05D008606 2.1e-23 112.1 65 83.1
PGR119G0226 Punica granatum HOM05D006885 ORTHO05D008606 2.8e-23 111.7 80 73.8
CAN.G1264.4 Capsicum annuum HOM05D006885 ORTHO05D008606 4.7e-23 110.9 65 84.6
DCAR_024641 Daucus carota HOM05D006885 ORTHO05D008606 4.7e-23 110.9 73 74.0
Thecc.02G198000 Theobroma cacao HOM05D006885 ORTHO05D008606 4.7e-23 110.9 78 80.8
Nitab4.5_0000913g0010 Nicotiana tabacum HOM05D006885 ORTHO05D008606 6.2e-23 110.5 62 85.5
AUR62005687 Chenopodium quinoa HOM05D006885 ORTHO05D008606 8.1e-23 110.2 63 82.5
AUR62028871 Chenopodium quinoa HOM05D006885 ORTHO05D008606 8.1e-23 110.2 63 82.5
Cc11_g17420 Coffea canephora HOM05D006885 ORTHO05D008606 8.1e-23 110.2 67 80.6
PGSC0003DMG400011888 Solanum tuberosum HOM05D006885 ORTHO05D008606 8.1e-23 110.2 84 69.0
Glyma.08G361800 Glycine max HOM05D006885 ORTHO05D008606 1.1e-22 109.8 62 85.5
Oeu011334.1 Olea europaea HOM05D006885 ORTHO05D008606 1.1e-22 109.8 81 71.6
MSTRG.471 Avicennia marina HOM05D006885 ORTHO05D008606 1.4e-22 109.4 68 77.9
Medtr3g074700 Medicago truncatula HOM05D006885 ORTHO05D008606 1.4e-22 109.4 62 83.9
Aa31LG7G9990 Aethionema arabicum HOM05D006885 ORTHO05D008606 1.8e-22 109.0 74 75.7
Oeu044483.1 Olea europaea HOM05D006885 ORTHO05D008606 1.8e-22 109.0 61 85.2
Phvul.008G000900 Phaseolus vulgaris HOM05D006885 ORTHO05D008606 1.8e-22 109.0 55 92.7
Sopen01g005380 Solanum pennellii HOM05D006885 ORTHO05D008606 1.8e-22 109.0 65 81.5
PSO017G7113 Papaver somniferum HOM05D006885 ORTHO05D008606 2.3e-22 108.6 79 74.7
CARHR027030 Cardamine hirsuta HOM05D006885 ORTHO05D008606 3.1e-22 108.2 76 75.0
Migut.K00992 Erythranthe guttata HOM05D006885 ORTHO05D008606 4.0e-22 107.8 60 85.0
Glyma.18G300000 Glycine max HOM05D006885 ORTHO05D008606 8.9e-22 106.7 63 84.1
THA.LOC104825479 Tarenaya hassleriana HOM05D006885 ORTHO05D008606 1.2e-21 106.3 66 83.3
Psat0s1880g0200 Pisum sativum HOM05D006885 ORTHO05D008606 2.6e-21 105.1 71 77.5
Lj6A834T26 Lonicera japonica HOM05D006885 ORTHO05D008606 3.4e-21 104.8 75 68.0
unitig_26.g10421 Utricularia gibba HOM05D006885 ORTHO05D008606 9.9e-21 103.2 57 87.7
SalBow2G1383 Salvia bowleyana HOM05D006885 ORTHO05D008606 1.3e-20 102.8 80 67.5
Thhalv10009236m.g Eutrema salsugineum HOM05D006885 ORTHO05D008606 1.7e-20 102.4 62 80.6
Sp1g23670 Schrenkiella parvula HOM05D006885 ORTHO05D008606 1.7e-20 102.4 65 80.0
BcaC01g01613 Brassica carinata HOM05D006885 ORTHO05D008606 2.2e-20 102.1 58 84.5
BcaC01g06952 Brassica carinata HOM05D006885 ORTHO05D008606 2.2e-20 102.1 58 84.5
A08p26290 Brassica napus HOM05D006885 ORTHO05D008606 2.2e-20 102.1 58 84.5
BraA08t34580Z Brassica rapa HOM05D006885 ORTHO05D008606 2.2e-20 102.1 58 84.5
C03p73770 Brassica napus HOM05D006885 ORTHO05D008606 2.9e-20 101.7 71 74.6
BolC3t19669H Brassica oleracea HOM05D006885 ORTHO05D008606 2.9e-20 101.7 76 71.1
Carub.0001s2598 Capsella rubella HOM05D006885 ORTHO05D008606 2.9e-20 101.7 71 71.8
BraA07t28960Z Brassica rapa HOM05D006885 ORTHO05D008606 3.7e-20 101.3 72 70.8
GSVIVG01000942001 Vitis vinifera HOM05D006885 ORTHO05D008606 3.7e-20 101.3 53 92.5
BcaB03g13983 Brassica carinata HOM05D006885 ORTHO05D008606 4.9e-20 100.9 58 82.8
BcaC06g35293 Brassica carinata HOM05D006885 ORTHO05D008606 4.9e-20 100.9 72 70.8
C07p17740 Brassica napus HOM05D006885 ORTHO05D008606 4.9e-20 100.9 72 70.8
BolC7t42280H Brassica oleracea HOM05D006885 ORTHO05D008606 4.9e-20 100.9 72 70.8
HPP92_021686 Vanilla planifolia HOM05D006885 ORTHO05D008606 4.9e-20 100.9 65 73.8
AL1G40850 Arabidopsis lyrata HOM05D006885 ORTHO05D008606 6.4e-20 100.5 57 84.2
AT1G27435 Arabidopsis thaliana HOM05D006885 ORTHO05D008606 6.4e-20 100.5 75 72.0
A07p11750 Brassica napus HOM05D006885 ORTHO05D008606 6.4e-20 100.5 72 70.8
Haze_11752 Corylus avellana HOM05D006885 ORTHO05D008606 1.4e-19 99.4 94 59.6
Lalb_Chr10g0091171 Lupinus albus HOM05D006885 ORTHO05D008606 4.1e-19 97.8 53 88.7
HPP92_021628 Vanilla planifolia HOM05D006885 ORTHO05D008606 4.1e-19 97.8 65 72.3
EL10Ac6g13573 Beta vulgaris HOM05D006885 ORTHO05D008606 2.1e-18 95.5 53 84.9
SHI04153 Sapria himalayana HOM05D006885 ORTHO05D008606 2.1e-18 95.5 77 67.5
CDE05G1244 Ceratophyllum demersum HOM05D006885 ORTHO05D008606 1.0e-17 93.2 61 77.0
QL03p050754 Quercus lobata HOM05D006885 ORTHO05D008606 1.3e-17 92.8 47 93.6
Zm00001eb133070 Zea mays HOM05D006885 ORTHO05D008606 1.3e-17 92.8 73 64.4
ATR0582G111 Amborella trichopoda HOM05D006885 ORTHO05D008606 1.7e-17 92.4 63 77.8
Dinv09126 Davidia involucrata HOM05D006885 ORTHO05D008606 1.7e-17 92.4 73 68.5
SalBow1G0427 Salvia bowleyana HOM05D006885 ORTHO05D008606 2.3e-17 92.0 61 73.8
CSS0038255 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 5.1e-17 90.9 48 91.7
Zm00001eb408880 Zea mays HOM05D006885 ORTHO05D008606 6.6e-17 90.5 64 65.6
HanXRQChr03g0067371 Helianthus annuus HOM05D006885 ORTHO05D008606 2.5e-16 88.6 45 91.1
MELO3C035240.2 Cucumis melo HOM05D006885 ORTHO05D008606 3.3e-16 88.2 47 87.2
Hund25491 Selenicereus undatus HOM05D006885 ORTHO05D008606 5.6e-16 87.4 69 66.7
Sc11g0000250 Simmondsia chinensis HOM05D006885 ORTHO05D008606 9.5e-16 86.7 42 95.2
MBI12_g28748_MAGBIO Magnolia biondii HOM05D006885 ORTHO05D008606 1.2e-15 86.3 63 74.6
Ah.03g135790 Amaranthus hybridus HOM05D006885 ORTHO05D008606 3.6e-15 84.7 75 61.3
SGA_v2.0_scaffold9G04792 Striga asiatica HOM05D006885 ORTHO05D008606 8.1e-15 83.6 44 86.4
Gorai.001G210600 Gossypium raimondii HOM05D006885 ORTHO05D008606 3.8e-12 74.7 43 81.4
CSS0039361 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 4.9e-12 74.3 37 94.6
Gohir.D07G189020 Gossypium hirsutum HOM05D006885 ORTHO05D008606 1.1e-11 73.2 43 79.1
Pp3c6_10000 Physcomitrium patens HOM05D006885 ORTHO05D008606 1.3e-09 66.2 66 57.6
TPR.G7690 Trifolium pratense HOM05D006885 ORTHO05D008606 3.9e-09 64.7 29 96.6
Gohir.A06G101502 Gossypium hirsutum HOM05D006885 ORTHO05D008606 8.7e-09 63.5 43 67.4
Gohir.D02G113400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 1.1e-08 63.2 32 87.5
Gorai.005G128300 Gossypium raimondii HOM05D006885 ORTHO05D008606 1.1e-08 63.2 32 87.5
AagrBONN_evm.TU.Sc2ySwM_362.2152 Anthoceros agrestis HOM05D006885 ORTHO05D008606 3.1e-06 55.1 68 51.5
Mapoly0027s0032 Marchantia polymorpha HOM05D006885 ORTHO05D008606 6.9e-06 53.9 60 53.3


User provided reference genes

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