Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2178 Trochodendron aralioides HOM05D001044 ORTHO05D008486 6.6e-168 594.0 300 100.0
TAR629G0277 Trochodendron aralioides HOM05D001044 ORTHO05D008486 1.4e-85 320.5 202 84.7
MBI06_g14407_MAGBIO Magnolia biondii HOM05D001044 ORTHO05D008486 4.9e-46 189.1 199 54.8
Nn1g01757 Nelumbo nucifera HOM05D001044 ORTHO05D008486 9.8e-39 164.9 200 49.0
PSO063G4777 Papaver somniferum HOM05D001044 ORTHO05D008486 8.3e-38 161.8 200 49.0
QL02p032522 Quercus lobata HOM05D001044 ORTHO05D008486 4.6e-36 156.0 180 51.7
PSO170G5857 Papaver somniferum HOM05D001044 ORTHO05D008486 7.8e-36 155.2 200 48.0
Dinv38884 Davidia involucrata HOM05D001044 ORTHO05D008486 2.1e-33 147.1 169 50.9
Lj2A175T71 Lonicera japonica HOM05D001044 ORTHO05D008486 4.7e-33 146.0 186 47.3
ATR0709G023 Amborella trichopoda HOM05D001044 ORTHO05D008486 1.1e-32 144.8 188 46.8
vmacro11419 Vaccinium macrocarpon HOM05D001044 ORTHO05D008486 2.3e-32 143.7 200 45.0
Cfa012268 Carpinus fangiana HOM05D001044 ORTHO05D008486 6.8e-32 142.1 180 49.4
CiPaw.11G126800 Carya illinoinensis HOM05D001044 ORTHO05D008486 2.0e-31 140.6 178 49.4
Rhsim02G0237500 Rhododendron simsii HOM05D001044 ORTHO05D008486 9.9e-31 138.3 202 44.1
Thecc.03G289400 Theobroma cacao HOM05D001044 ORTHO05D008486 9.9e-31 138.3 187 46.0
Duzib205G1268 Durio zibethinus HOM05D001044 ORTHO05D008486 1.3e-30 137.9 176 48.3
Manes.02G014750 Manihot esculenta HOM05D001044 ORTHO05D008486 1.3e-30 137.9 187 46.0
CSS0027074 Camellia sinensis var. sinensis HOM05D001044 ORTHO05D008486 8.4e-30 135.2 169 49.7
GSVIVG01019449001 Vitis vinifera HOM05D001044 ORTHO05D008486 1.4e-29 134.4 183 47.5
Prupe.5G110800 Prunus persica HOM05D001044 ORTHO05D008486 3.2e-29 133.3 192 45.8
Cpa.g.sc321.3 Carica papaya HOM05D001044 ORTHO05D008486 4.1e-29 132.9 171 49.1
ATR0636G002 Amborella trichopoda HOM05D001044 ORTHO05D008486 5.4e-29 132.5 155 49.0
COL.COLO4_08333 Corchorus olitorius HOM05D001044 ORTHO05D008486 7.1e-29 132.1 181 47.0
Aqoxy5G04043 Aquilegia oxysepala HOM05D001044 ORTHO05D008486 1.2e-28 131.3 200 44.0
Actinidia04223 Actinidia chinensis HOM05D001044 ORTHO05D008486 2.1e-28 130.6 131 54.2
Gohir.A12G232500 Gossypium hirsutum HOM05D001044 ORTHO05D008486 2.7e-28 130.2 187 46.0
Gohir.D12G234900 Gossypium hirsutum HOM05D001044 ORTHO05D008486 6.0e-28 129.0 187 46.5
Hma1.2p1_0216F.1_g091280 Hydrangea macrophylla HOM05D001044 ORTHO05D008486 2.3e-27 127.1 148 48.0
Atru.chr9.2079 Acer truncatum HOM05D001044 ORTHO05D008486 5.1e-27 125.9 185 45.9
MD06G1096200 Malus domestica HOM05D001044 ORTHO05D008486 6.6e-27 125.6 187 44.9
Gorai.008G251200 Gossypium raimondii HOM05D001044 ORTHO05D008486 1.5e-26 124.4 167 46.7
PGR031G0274 Punica granatum HOM05D001044 ORTHO05D008486 4.3e-26 122.9 149 49.0
Sabra03G0096700 Salix brachista HOM05D001044 ORTHO05D008486 5.6e-26 122.5 202 41.6
TWI60G0564 Tripterygium wilfordii HOM05D001044 ORTHO05D008486 7.3e-26 122.1 117 57.3
Ciclev10020858m.g Citrus clementina HOM05D001044 ORTHO05D008486 9.6e-26 121.7 115 58.3
Potri.003G134300 Populus trichocarpa HOM05D001044 ORTHO05D008486 4.7e-25 119.4 141 48.2
Haze_08717 Corylus avellana HOM05D001044 ORTHO05D008486 6.2e-25 119.0 92 68.5
Eucgr.D01791 Eucalyptus grandis HOM05D001044 ORTHO05D008486 6.2e-25 119.0 121 55.4
FAN04G0603 Fragaria x ananassa HOM05D001044 ORTHO05D008486 2.4e-24 117.1 178 46.1
ClCG01G002130 Citrullus lanatus HOM05D001044 ORTHO05D008486 4.0e-24 116.3 163 45.4
Sed0026915 Sechium edule HOM05D001044 ORTHO05D008486 4.0e-24 116.3 190 42.1
FAN13G0499 Fragaria x ananassa HOM05D001044 ORTHO05D008486 5.2e-24 115.9 97 63.9
FAN13G2515 Fragaria x ananassa HOM05D001044 ORTHO05D008486 5.2e-24 115.9 97 63.9
Haze_21307 Corylus avellana HOM05D001044 ORTHO05D008486 8.9e-24 115.2 165 45.5
CsaV3_5G002250 Cucumis sativus L. HOM05D001044 ORTHO05D008486 2.0e-23 114.0 163 45.4
RcHm_v2.0_Chr7g0196061 Rosa chinensis HOM05D001044 ORTHO05D008486 3.4e-23 113.2 187 44.9
HanXRQChr17g0533941 Helianthus annuus HOM05D001044 ORTHO05D008486 7.6e-23 112.1 127 50.4
CANSAT35G0786 Cannabis sativa HOM05D001044 ORTHO05D008486 1.7e-22 110.9 179 42.5
Peaxi162Scf00074g01514 Petunia axillaris HOM05D001044 ORTHO05D008486 3.8e-22 109.8 118 52.5
CAN.G532.67 Capsicum annuum HOM05D001044 ORTHO05D008486 4.9e-22 109.4 147 48.3
FAN04G1718 Fragaria x ananassa HOM05D001044 ORTHO05D008486 4.9e-22 109.4 190 43.2
Ah.12g052130 Amaranthus hybridus HOM05D001044 ORTHO05D008486 6.4e-22 109.0 106 55.7
PGSC0003DMG400012171 Solanum tuberosum HOM05D001044 ORTHO05D008486 6.4e-22 109.0 119 52.9
Cc08_g15530 Coffea canephora HOM05D001044 ORTHO05D008486 8.4e-22 108.6 109 56.9
MELO3C005729.2 Cucumis melo HOM05D001044 ORTHO05D008486 1.4e-21 107.8 188 41.0
FAN08G0452 Fragaria x ananassa HOM05D001044 ORTHO05D008486 1.9e-21 107.5 193 40.9
FAN18G2024 Fragaria x ananassa HOM05D001044 ORTHO05D008486 1.9e-21 107.5 187 42.8
Solyc08g081770.3 Solanum lycopersicum HOM05D001044 ORTHO05D008486 1.9e-21 107.5 117 53.0
Lsat_1_v5_gn_3_9840 Lactuca sativa HOM05D001044 ORTHO05D008486 4.2e-21 106.3 183 40.4
Sopen08g030070 Solanum pennellii HOM05D001044 ORTHO05D008486 4.2e-21 106.3 111 54.1
FvH4_5g03670 Fragaria vesca HOM05D001044 ORTHO05D008486 5.4e-21 105.9 187 42.2
Nitab4.5_0011409g0010 Nicotiana tabacum HOM05D001044 ORTHO05D008486 5.4e-21 105.9 109 55.0
Oeu053115.1 Olea europaea HOM05D001044 ORTHO05D008486 5.4e-21 105.9 100 55.0
Nitab4.5_0000966g0020 Nicotiana tabacum HOM05D001044 ORTHO05D008486 1.2e-20 104.8 110 54.5
DCAR_008527 Daucus carota HOM05D001044 ORTHO05D008486 1.6e-20 104.4 122 46.7
Lalb_Chr09g0320731 Lupinus albus HOM05D001044 ORTHO05D008486 1.6e-20 104.4 116 53.4
Medtr5g009810 Medicago truncatula HOM05D001044 ORTHO05D008486 2.1e-20 104.0 143 46.9
TPR.G6643 Trifolium pratense HOM05D001044 ORTHO05D008486 2.1e-20 104.0 150 44.7
Migut.E01805 Erythranthe guttata HOM05D001044 ORTHO05D008486 3.5e-20 103.2 166 41.6
AUR62010778 Chenopodium quinoa HOM05D001044 ORTHO05D008486 4.6e-20 102.8 152 44.1
Psat2g184200 Pisum sativum HOM05D001044 ORTHO05D008486 4.6e-20 102.8 105 54.3
CDE08G1610 Ceratophyllum demersum HOM05D001044 ORTHO05D008486 6.0e-20 102.4 202 38.6
LjContig00312_ERROPOS870357g0011954 Lotus japonicus HOM05D001044 ORTHO05D008486 7.8e-20 102.1 111 53.2
HPP92_008794 Vanilla planifolia HOM05D001044 ORTHO05D008486 7.8e-20 102.1 99 53.5
THA.LOC104809353 Tarenaya hassleriana HOM05D001044 ORTHO05D008486 1.3e-19 101.3 109 57.8
EL10Ac5g12855 Beta vulgaris HOM05D001044 ORTHO05D008486 1.7e-19 100.9 185 37.8
CDE02G3263 Ceratophyllum demersum HOM05D001044 ORTHO05D008486 3.9e-19 99.8 177 40.1
AUR62019777 Chenopodium quinoa HOM05D001044 ORTHO05D008486 6.6e-19 99.0 152 43.4
SGA_v2.0_scaffold163G37966 Striga asiatica HOM05D001044 ORTHO05D008486 1.5e-18 97.8 164 42.7
Phvul.002G161500 Phaseolus vulgaris HOM05D001044 ORTHO05D008486 3.3e-18 96.7 130 44.6
VMungo1215G2119 Vigna mungo HOM05D001044 ORTHO05D008486 3.3e-18 96.7 126 46.0
arahy.Tifrunner.gnm1.ann1.U47N90 Arachis hypogaea HOM05D001044 ORTHO05D008486 5.6e-18 95.9 165 40.0
arahy.Tifrunner.gnm1.ann1.FZ52LJ Arachis hypogaea HOM05D001044 ORTHO05D008486 9.6e-18 95.1 129 45.7
Os01g0221700 Oryza sativa ssp. japonica HOM05D001044 ORTHO05D008486 1.3e-17 94.7 119 49.6
unitig_578.g16562 Utricularia gibba HOM05D001278 ORTHO05D001104 6.2e-17 92.4 181 37.6
Glyma.01G223500 Glycine max HOM05D001044 ORTHO05D008486 8.1e-17 92.0 126 48.4
Glyma.11G020001 Glycine max HOM05D001044 ORTHO05D008486 2.4e-16 90.5 105 53.3
Carub.0002s0066 Capsella rubella HOM05D001044 ORTHO05D008486 3.1e-16 90.1 110 49.1
Zm00001eb338890 Zea mays HOM05D001044 ORTHO05D008486 3.1e-16 90.1 109 47.7
AL2G10880 Arabidopsis lyrata HOM05D001044 ORTHO05D008486 1.5e-15 87.8 110 46.4
Thhalv10023558m.g Eutrema salsugineum HOM05D001044 ORTHO05D008486 4.5e-15 86.3 110 46.4
Sc01g0009990 Simmondsia chinensis HOM05D001044 ORTHO05D008486 1.1e-13 81.6 86 54.7
AT1G64150 Arabidopsis thaliana HOM05D001044 ORTHO05D008486 1.9e-13 80.9 110 44.5
Aa31LG2G1200 Aethionema arabicum HOM05D001044 ORTHO05D008486 2.4e-13 80.5 112 46.4
Sp2g00580 Schrenkiella parvula HOM05D001044 ORTHO05D008486 1.6e-12 77.8 103 46.6
BcaB07g31440 Brassica carinata HOM05D001044 ORTHO05D008486 2.7e-12 77.0 102 48.0
BcaB07g31439 Brassica carinata HOM05D003548 ORTHO05D008486 3.5e-12 76.6 109 44.0
A09p14940 Brassica napus HOM05D001044 ORTHO05D008486 3.5e-12 76.6 144 36.8
BraA09t37139Z Brassica rapa HOM05D001044 ORTHO05D008486 3.5e-12 76.6 144 36.8
Hund14251 Selenicereus undatus HOM05D001044 ORTHO05D008486 3.5e-12 76.6 92 51.1
BcaC04g22536 Brassica carinata HOM05D001044 ORTHO05D008486 1.3e-11 74.7 106 46.2
C09p18060 Brassica napus HOM05D001044 ORTHO05D008486 1.3e-11 74.7 106 46.2
BolC9t54703H Brassica oleracea HOM05D001044 ORTHO05D008486 1.3e-11 74.7 106 46.2
CARHR046790 Cardamine hirsuta HOM05D001044 ORTHO05D008486 8.7e-11 72.0 47 70.2
Mapoly0032s0011 Marchantia polymorpha HOM05D001044 ORTHO05D008486 6.2e-09 65.9 105 36.2
AagrBONN_evm.TU.Sc2ySwM_344.1872 Anthoceros agrestis HOM05D001044 ORTHO05D008486 1.8e-08 64.3 75 48.0
SEGI_34114 Sequoiadendron giganteum HOM05D001044 ORTHO05D008486 4.0e-08 63.2 47 61.7
Lsat_1_v5_gn_1_127740 Lactuca sativa HOM05D001044 ORTHO05D008486 1.5e-07 61.2 45 62.2
Pp3c7_26970 Physcomitrium patens HOM05D001044 ORTHO05D008486 9.9e-07 58.5 145 32.4
Pp3c2_28570 Physcomitrium patens HOM05D001044 ORTHO05D008486 3.8e-06 56.6 116 34.5
TAR625G0448 Trochodendron aralioides HOM05D004488 ORTHO05D005374 8.4e-06 55.5 52 61.5


User provided reference genes

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