Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2175 Trochodendron aralioides HOM05D005841 ORTHO05D007132 3.3e-258 894.8 543 100.0
PSO384G2928 Papaver somniferum HOM05D005841 ORTHO05D007132 1.4e-51 208.4 126 83.3
PSO339G0077 Papaver somniferum HOM05D005841 ORTHO05D007132 9.1e-51 205.7 126 82.5
Nn2g15922 Nelumbo nucifera HOM05D005841 ORTHO05D007132 2.5e-48 197.6 126 78.6
Atru.chr12.1096 Acer truncatum HOM05D005841 ORTHO05D007132 2.7e-47 194.1 126 77.8
FAN03G2434 Fragaria x ananassa HOM05D005841 ORTHO05D007132 4.7e-47 193.4 127 74.8
Cpa.g.sc33.143 Carica papaya HOM05D005841 ORTHO05D007132 3.0e-46 190.7 126 77.0
Ciclev10001427m.g Citrus clementina HOM05D005841 ORTHO05D007132 3.0e-46 190.7 126 77.0
QL04p022932 Quercus lobata HOM05D005841 ORTHO05D007132 3.0e-46 190.7 124 77.4
CSS0015441 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 6.8e-46 189.5 149 67.1
CiPaw.14G011500 Carya illinoinensis HOM05D005841 ORTHO05D007132 8.8e-46 189.1 124 78.2
Rhsim03G0005600 Rhododendron simsii HOM05D005841 ORTHO05D007132 1.5e-45 188.3 124 76.6
Sabra03G0139600 Salix brachista HOM05D005841 ORTHO05D007132 2.0e-45 188.0 124 77.4
MBI19_g24060_MAGBIO Magnolia biondii HOM05D005841 ORTHO05D007132 2.6e-45 187.6 126 77.8
Glyma.04G125600 Glycine max HOM05D005841 ORTHO05D007132 4.4e-45 186.8 126 75.4
Duzib128G0994 Durio zibethinus HOM05D005841 ORTHO05D007132 5.7e-45 186.4 126 76.2
Potri.003G189400 Populus trichocarpa HOM05D005841 ORTHO05D007132 7.5e-45 186.0 124 76.6
Thecc.10G128400 Theobroma cacao HOM05D005841 ORTHO05D007132 7.5e-45 186.0 126 76.2
Aqoxy3G04362 Aquilegia oxysepala HOM05D005841 ORTHO05D007132 1.3e-44 185.3 126 73.8
Potri.001G036400 Populus trichocarpa HOM05D005841 ORTHO05D007132 1.3e-44 185.3 126 74.6
Sabra01G0025200 Salix brachista HOM05D005841 ORTHO05D007132 1.7e-44 184.9 126 74.6
TPR.G5121 Trifolium pratense HOM05D005841 ORTHO05D007132 1.7e-44 184.9 126 76.2
Medtr3g011510 Medicago truncatula HOM05D005841 ORTHO05D007132 2.2e-44 184.5 126 75.4
COL.COLO4_09288 Corchorus olitorius HOM05D005841 ORTHO05D007132 4.8e-44 183.3 126 74.6
Phvul.005G012800 Phaseolus vulgaris HOM05D005841 ORTHO05D007132 6.3e-44 183.0 126 72.2
Gohir.A06G171000 Gossypium hirsutum HOM05D005841 ORTHO05D007132 8.3e-44 182.6 126 74.6
Gohir.D06G178900 Gossypium hirsutum HOM05D005841 ORTHO05D007132 8.3e-44 182.6 126 74.6
Gorai.010G208800 Gossypium raimondii HOM05D005841 ORTHO05D007132 8.3e-44 182.6 126 74.6
VMungo1080G1721 Vigna mungo HOM05D005841 ORTHO05D007132 8.3e-44 182.6 126 73.0
Glyma.06G313000 Glycine max HOM05D005841 ORTHO05D007132 1.1e-43 182.2 126 73.8
Lju124A25T34 Lonicera japonica HOM05D005841 ORTHO05D007132 2.4e-43 181.0 126 73.8
Peaxi162Scf00258g00731 Petunia axillaris HOM05D005841 ORTHO05D007132 2.4e-43 181.0 124 73.4
Cc06_g15810 Coffea canephora HOM05D005841 ORTHO05D007132 3.1e-43 180.6 124 74.2
vmacro07900 Vaccinium macrocarpon HOM05D005841 ORTHO05D007132 3.1e-43 180.6 124 73.4
Actinidia22040 Actinidia chinensis HOM05D005841 ORTHO05D007132 4.1e-43 180.3 124 73.4
MSTRG.19910 Avicennia marina HOM05D005841 ORTHO05D007132 4.1e-43 180.3 124 71.8
Manes.04G153300 Manihot esculenta HOM05D005841 ORTHO05D007132 5.4e-43 179.9 126 72.2
MSTRG.26082 Avicennia marina HOM05D005841 ORTHO05D007132 7.0e-43 179.5 124 71.8
CANSAT56G0667 Cannabis sativa HOM05D005841 ORTHO05D007132 7.0e-43 179.5 125 70.4
Dinv24065 Davidia involucrata HOM05D005841 ORTHO05D007132 7.0e-43 179.5 126 71.4
Oeu007758.1 Olea europaea HOM05D005841 ORTHO05D007132 7.0e-43 179.5 124 72.6
Ca_26913_v3 Cicer arietinum L. HOM05D005841 ORTHO05D007132 2.7e-42 177.6 126 73.0
Lj3g0005753 Lotus japonicus HOM05D005841 ORTHO05D007132 4.5e-42 176.8 124 71.8
Nitab4.5_0000324g0020 Nicotiana tabacum HOM05D005841 ORTHO05D007132 4.5e-42 176.8 124 72.6
TWI38G1535 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 5.9e-42 176.4 126 69.0
arahy.Tifrunner.gnm1.ann1.AX9XXP Arachis hypogaea HOM05D005841 ORTHO05D007132 7.7e-42 176.0 126 71.4
Lsat_1_v5_gn_5_163601 Lactuca sativa HOM05D005841 ORTHO05D007132 7.7e-42 176.0 126 71.4
arahy.Tifrunner.gnm1.ann1.87YK44 Arachis hypogaea HOM05D005841 ORTHO05D007132 1.3e-41 175.3 126 71.4
Lalb_Chr18g0048171 Lupinus albus HOM05D005841 ORTHO05D007132 1.3e-41 175.3 126 70.6
Sopen10g031070 Solanum pennellii HOM05D005841 ORTHO05D007132 1.7e-41 174.9 124 72.6
Nitab4.5_0004458g0010 Nicotiana tabacum HOM05D005841 ORTHO05D007132 2.2e-41 174.5 124 71.8
Sc20g0000960 Simmondsia chinensis HOM05D005841 ORTHO05D007132 2.2e-41 174.5 124 70.2
Solyc10g080520.3 Solanum lycopersicum HOM05D005841 ORTHO05D007132 6.5e-41 172.9 124 71.0
PGSC0003DMG400023670 Solanum tuberosum HOM05D005841 ORTHO05D007132 1.1e-40 172.2 124 71.8
TWI15G0221 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 1.5e-40 171.8 126 68.3
Zm00001eb126920 Zea mays HOM05D005841 ORTHO05D007132 1.9e-40 171.4 124 67.7
BcaB02g07739 Brassica carinata HOM05D005841 ORTHO05D007132 2.5e-40 171.0 146 60.3
Thhalv10010421m.g Eutrema salsugineum HOM05D005841 ORTHO05D007132 5.5e-40 169.9 126 67.5
ECA248G0891 Erigeron canadensis HOM05D005841 ORTHO05D007132 9.4e-40 169.1 126 69.0
Hma1.2p1_3953F.1_g338070 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 9.4e-40 169.1 126 69.8
Eucgr.G03178 Eucalyptus grandis HOM05D005841 ORTHO05D007132 1.2e-39 168.7 154 61.7
DCAR_019783 Daucus carota HOM05D005841 ORTHO05D007132 2.7e-39 167.5 124 67.7
Aa31sc488G20 Aethionema arabicum HOM05D005841 ORTHO05D007132 8.0e-39 166.0 126 65.9
Sp5g08040 Schrenkiella parvula HOM05D005841 ORTHO05D007132 1.0e-38 165.6 146 58.9
unitig_699.g19444 Utricularia gibba HOM05D005841 ORTHO05D007132 1.8e-38 164.9 125 64.8
CARHR164270 Cardamine hirsuta HOM05D005841 ORTHO05D007132 3.0e-38 164.1 126 65.1
AL5G35420 Arabidopsis lyrata HOM05D005841 ORTHO05D007132 4.0e-38 163.7 126 65.9
Sed0002293 Sechium edule HOM05D005841 ORTHO05D007132 6.8e-38 162.9 124 68.5
AT3G54360 Arabidopsis thaliana HOM05D005841 ORTHO05D007132 8.8e-38 162.5 126 65.1
MELO3C011778.2 Cucumis melo HOM05D005841 ORTHO05D007132 8.8e-38 162.5 124 67.7
CsaV3_5G029280 Cucumis sativus L. HOM05D005841 ORTHO05D007132 8.8e-38 162.5 124 67.7
HanXRQChr13g0390471 Helianthus annuus HOM05D005841 ORTHO05D007132 1.2e-37 162.2 126 65.1
C08p29570 Brassica napus HOM05D005841 ORTHO05D007132 2.0e-37 161.4 127 65.4
BolC8t50563H Brassica oleracea HOM05D005841 ORTHO05D007132 2.0e-37 161.4 127 65.4
Carub.0005s2096 Capsella rubella HOM05D005841 ORTHO05D007132 2.0e-37 161.4 144 58.3
BcaC08g44679 Brassica carinata HOM05D005841 ORTHO05D007132 2.6e-37 161.0 127 66.1
CDE02G3427 Ceratophyllum demersum HOM05D005841 ORTHO05D007132 2.6e-37 161.0 126 63.5
Gorai.011G224300 Gossypium raimondii HOM05D005841 ORTHO05D007132 2.6e-37 161.0 111 72.1
SEGI_15550 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 2.6e-37 161.0 127 65.4
A07p22080 Brassica napus HOM05D005841 ORTHO05D007132 4.4e-37 160.2 127 65.4
A09p47340 Brassica napus HOM05D005841 ORTHO05D007132 4.4e-37 160.2 127 65.4
BraA07t29891Z Brassica rapa HOM05D005841 ORTHO05D007132 4.4e-37 160.2 127 65.4
Sed0011967 Sechium edule HOM05D005841 ORTHO05D007132 4.4e-37 160.2 124 67.7
EL10Ac9g20941 Beta vulgaris HOM05D005841 ORTHO05D007132 7.5e-37 159.5 136 61.0
AUR62041651 Chenopodium quinoa HOM05D005841 ORTHO05D007132 7.5e-37 159.5 127 62.2
THA.LOC104809184 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 7.5e-37 159.5 126 61.9
AUR62035532 Chenopodium quinoa HOM05D005841 ORTHO05D007132 9.8e-37 159.1 127 63.8
BraA09t40195Z Brassica rapa HOM05D005841 ORTHO05D007132 1.7e-36 158.3 127 64.6
BcaB01g00199 Brassica carinata HOM05D005841 ORTHO05D007132 2.2e-36 157.9 150 56.7
Gohir.D10G200050 Gossypium hirsutum HOM05D005841 ORTHO05D007132 2.2e-36 157.9 111 70.3
THA.LOC104824200 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 2.2e-36 157.9 126 66.7
C06p22120 Brassica napus HOM05D005841 ORTHO05D007132 4.9e-36 156.8 122 67.2
BolC6t37399H Brassica oleracea HOM05D005841 ORTHO05D007132 4.9e-36 156.8 122 67.2
Os01g0104100 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 8.3e-36 156.0 124 64.5
Dinv14310 Davidia involucrata HOM05D005841 ORTHO05D007132 1.4e-35 155.2 126 65.9
Haze_02951 Corylus avellana HOM05D005841 ORTHO05D007132 1.6e-34 151.8 204 47.1
Ah.07g203740 Amaranthus hybridus HOM05D005841 ORTHO05D007132 2.7e-34 151.0 124 62.9
Hund07799 Selenicereus undatus HOM05D005841 ORTHO05D007132 4.5e-34 150.2 124 63.7
GSVIVG01027370001 Vitis vinifera HOM05D005841 ORTHO05D007132 6.1e-31 139.8 124 61.3
Pp3c4_17260 Physcomitrium patens HOM05D005841 ORTHO05D007132 9.8e-29 132.5 129 55.8
Psat5g225080 Pisum sativum HOM05D005841 ORTHO05D007132 1.3e-28 132.1 92 72.8
ClCG11G012870 Citrullus lanatus HOM05D005841 ORTHO05D007132 4.1e-27 127.1 98 68.4
FAN06G1077 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.0e-25 122.5 127 53.5
FAN06G4202 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.0e-25 122.5 127 53.5
FAN01G0675 Fragaria x ananassa HOM05D005841 ORTHO05D007132 2.3e-25 121.3 127 52.8
FAN03G2595 Fragaria x ananassa HOM05D005841 ORTHO05D007132 2.3e-25 121.3 127 52.8
FAN10G3225 Fragaria x ananassa HOM05D005841 ORTHO05D007132 2.3e-25 121.3 127 52.8
Mapoly0042s0033 Marchantia polymorpha HOM05D005841 ORTHO05D007132 2.3e-25 121.3 115 56.5
AagrBONN_evm.TU.Sc2ySwM_344.2135 Anthoceros agrestis HOM05D005841 ORTHO05D007132 8.6e-25 119.4 144 50.0
MD07G1085200 Malus domestica HOM05D005841 ORTHO05D007132 1.5e-24 118.6 151 47.0
Prupe.2G051700 Prunus persica HOM05D005841 ORTHO05D007132 1.9e-24 118.2 124 52.4
FvH4_7g04620 Fragaria vesca HOM05D005841 ORTHO05D007132 2.5e-24 117.9 124 53.2
RcHm_v2.0_Chr1g0330051 Rosa chinensis HOM05D005841 ORTHO05D007132 4.7e-23 113.6 124 51.6
Lsat_1_v5_gn_1_17940 Lactuca sativa HOM05D005841 ORTHO05D007132 1.4e-22 112.1 73 75.3
Os02g0795300 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 2.0e-21 108.2 124 49.2
SEGI_26376 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 8.3e-20 102.8 131 48.1
SMO194G0025 Selaginella moellendorffii HOM05D005841 ORTHO05D007132 1.7e-17 95.1 120 45.0
Migut.J01841 Erythranthe guttata HOM05D005841 ORTHO05D007132 6.6e-17 93.2 124 45.2
SGA_v2.0_scaffold69G23059 Striga asiatica HOM05D005841 ORTHO05D007132 3.3e-16 90.9 124 41.1
TAR375G0870 Trochodendron aralioides HOM05D000011 ORTHO05D005888 1.1e-14 85.9 50 76.0
HPP92_001714 Vanilla planifolia HOM05D005841 ORTHO05D007132 3.1e-14 84.3 82 57.3
AUR62039567 Chenopodium quinoa HOM05D005841 ORTHO05D007132 1.9e-11 75.1 133 38.3
TPR.G5122 Trifolium pratense HOM05D003377 ORTHO05D004080 7.8e-10 69.7 69 58.0
ATR0068G030 Amborella trichopoda HOM05D005841 ORTHO05D007132 1.0e-09 69.3 50 68.0
TAR627G0583 Trochodendron aralioides HOM05D000067 ORTHO05D000097 3.9e-09 67.4 35 85.7
CBR_g19049 Chara braunii HOM05D005841 ORTHO05D007132 1.1e-08 65.9 171 32.2


User provided reference genes

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