Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 1.3e-137 493.0 253 100.0
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 7.2e-75 284.6 258 62.4
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 4.1e-70 268.9 262 60.3
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 2.2e-60 236.5 260 54.6
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 1.6e-58 230.3 252 53.6
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 1.8e-49 200.3 271 47.2
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 7.5e-48 194.9 266 49.2
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 4.9e-47 192.2 232 53.0
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 1.8e-46 190.3 246 48.0
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 1.8e-46 190.3 263 48.3
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 3.1e-46 189.5 263 48.3
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 1.6e-45 187.2 262 46.6
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 3.5e-45 186.0 200 56.5
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 4.5e-45 185.7 247 49.0
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 3.3e-43 179.5 276 44.9
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 3.3e-43 179.5 248 47.2
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 3.3e-43 179.5 300 42.7
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 9.5e-43 177.9 265 44.9
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.2e-42 177.6 256 44.5
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 1.6e-42 177.2 277 44.0
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 8.0e-42 174.9 246 47.2
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 1.4e-41 174.1 268 45.1
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 1.4e-41 174.1 265 45.3
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 2.0e-40 170.2 260 45.0
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 2.6e-40 169.9 268 43.3
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 5.8e-40 168.7 261 44.4
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 5.8e-40 168.7 233 43.8
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 7.5e-40 168.3 248 45.2
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 1.3e-39 167.5 266 45.5
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 2.2e-39 166.8 234 47.4
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 4.9e-39 165.6 265 44.5
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 2.4e-38 163.3 276 40.6
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 2.4e-38 163.3 264 43.9
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.4e-38 163.3 264 43.9
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 4.1e-38 162.5 265 43.8
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 9.2e-38 161.4 256 47.7
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 1.6e-37 160.6 273 43.2
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 3.5e-37 159.5 259 44.8
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 6.0e-37 158.7 266 41.7
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 3.0e-36 156.4 256 47.3
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 6.6e-36 155.2 260 44.2
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 8.6e-36 154.8 282 40.1
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 1.5e-35 154.1 257 38.9
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 2.5e-35 153.3 230 43.0
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 5.6e-35 152.1 239 45.2
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 7.3e-35 151.8 243 45.7
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 9.5e-35 151.4 268 39.2
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 9.5e-35 151.4 258 39.1
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 8.0e-34 148.3 151 52.3
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 8.0e-34 148.3 256 43.8
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 4.0e-33 146.0 260 43.1
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 6.8e-33 145.2 228 42.5
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 8.9e-33 144.8 269 40.1
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 1.5e-32 144.1 268 39.9
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 9.8e-32 141.4 248 45.6
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.3e-31 141.0 182 47.8
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.3e-31 141.0 254 39.8
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.7e-31 140.6 274 38.0
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 2.2e-31 140.2 250 40.4
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 2.9e-31 139.8 289 40.8
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 3.7e-31 139.4 224 45.1
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 3.7e-31 139.4 268 38.8
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 3.2e-30 136.3 229 44.1
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 5.4e-30 135.6 230 42.2
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 9.2e-30 134.8 223 44.4
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.2e-29 134.4 271 41.0
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 2.7e-29 133.3 264 40.2
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 3.5e-29 132.9 166 49.4
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 3.5e-29 132.9 241 42.3
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 1.3e-28 131.0 283 35.3
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.7e-28 130.6 273 39.9
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 3.3e-27 126.3 242 38.8
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 4.3e-27 125.9 238 39.9
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.2e-26 124.4 242 40.5
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.8e-26 123.2 244 41.4
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.8e-26 123.2 242 40.5
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 8.1e-26 121.7 237 41.8
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 3.1e-25 119.8 226 39.4
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 3.1e-25 119.8 221 41.2
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 6.8e-25 118.6 342 33.0
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 8.9e-25 118.2 219 41.6
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 1.2e-24 117.9 240 38.3
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 1.2e-24 117.9 178 43.8
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 2.0e-24 117.1 242 38.0
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 9.9e-24 114.8 230 40.4
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 1.3e-23 114.4 259 36.3
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 1.1e-22 111.3 244 37.3
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 2.4e-22 110.2 244 40.2
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 3.2e-22 109.8 257 34.6
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 2.1e-21 107.1 237 38.0
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 3.5e-21 106.3 253 35.2
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 4.6e-21 105.9 206 38.8
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 6.0e-21 105.5 226 37.6
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 6.0e-21 105.5 250 34.4
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 1.7e-20 104.0 120 49.2
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 5.1e-20 102.4 229 37.1
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 8.6e-20 101.7 226 37.2
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 1.1e-19 101.3 203 37.4
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 1.9e-19 100.5 225 35.6
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.9e-19 100.5 248 33.5
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 7.3e-19 98.6 225 36.4
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 2.8e-18 96.7 143 40.6
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 4.7e-18 95.9 218 39.9
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 4.7e-18 95.9 218 39.9
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 4.7e-18 95.9 208 34.1
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 6.2e-18 95.5 248 37.5
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 1.1e-17 94.7 228 36.4
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.3e-15 87.8 248 35.9
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 6.4e-15 85.5 248 35.9
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 8.4e-15 85.1 149 39.6
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 8.4e-15 85.1 121 46.3
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 1.4e-14 84.3 243 35.0
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 2.5e-11 73.6 312 28.8
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 5.6e-11 72.4 87 46.0
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 7.3e-11 72.0 77 51.9
Nitab4.5_0001007g0050 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.8e-10 70.1 195 31.3
AT4G05018 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 4.0e-09 66.2 220 32.3
Oeu021600.1 Olea europaea HOM05D006486 ORTHO05D007888 4.4e-08 62.8 110 39.1
HPP92_012357 Vanilla planifolia HOM05D006486 ORTHO05D007888 5.8e-08 62.4 248 31.9
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 5.4e-06 55.8 132 37.1
AL6G48620 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 9.3e-06 55.1 163 36.2


User provided reference genes

Program Settings