Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2048 Trochodendron aralioides HOM05D000553 ORTHO05D020606 2.5e-26 121.3 60 100.0
PSO675G5003 Papaver somniferum HOM05D000553 ORTHO05D000460 1.1e-08 62.8 32 81.2
PGSC0003DMG400015367 Solanum tuberosum HOM05D000553 ORTHO05D000460 1.4e-08 62.4 32 81.2
Aqoxy1G02328 Aquilegia oxysepala HOM05D000553 ORTHO05D000460 1.8e-08 62.0 32 81.2
Actinidia09704 Actinidia chinensis HOM05D000553 ORTHO05D000460 2.3e-08 61.6 35 77.1
Nn1g04180 Nelumbo nucifera HOM05D000553 ORTHO05D000460 3.1e-08 61.2 32 84.4
PSO541G1930 Papaver somniferum HOM05D000553 ORTHO05D000460 3.1e-08 61.2 32 78.1
TPR.G7962 Trifolium pratense HOM05D000553 ORTHO05D000460 3.1e-08 61.2 32 84.4
arahy.Tifrunner.gnm1.ann1.5058JZ Arachis hypogaea HOM05D000553 ORTHO05D000460 4.0e-08 60.8 32 81.2
arahy.Tifrunner.gnm1.ann1.6NP7E0 Arachis hypogaea HOM05D000553 ORTHO05D000460 4.0e-08 60.8 32 81.2
EL10Ac4g08235 Beta vulgaris HOM05D000553 ORTHO05D000460 4.0e-08 60.8 32 78.1
Solyc12g013920.2 Solanum lycopersicum HOM05D000553 ORTHO05D000460 4.0e-08 60.8 32 78.1
Sopen12g005680 Solanum pennellii HOM05D000553 ORTHO05D000460 4.0e-08 60.8 32 78.1
Haze_09454 Corylus avellana HOM05D007892 ORTHO05D009211 5.2e-08 60.5 32 81.2
Haze_09467 Corylus avellana HOM05D000553 ORTHO05D000460 5.2e-08 60.5 32 81.2
Glyma.13G274000 Glycine max HOM05D000553 ORTHO05D000460 6.8e-08 60.1 32 81.2
Medtr2g078670 Medicago truncatula HOM05D000553 ORTHO05D000460 6.8e-08 60.1 32 81.2
PGR031G1145 Punica granatum HOM05D000553 ORTHO05D000460 6.8e-08 60.1 32 81.2
Lalb_Chr19g0134111 Lupinus albus HOM05D000553 ORTHO05D000460 8.9e-08 59.7 32 81.2
QL08p022801 Quercus lobata HOM05D000553 ORTHO05D000460 8.9e-08 59.7 32 81.2
GSVIVG01014293001 Vitis vinifera HOM05D000553 ORTHO05D000460 8.9e-08 59.7 32 78.1
Cc05_g11760 Coffea canephora HOM05D000553 ORTHO05D000460 1.2e-07 59.3 32 78.1
Glyma.12G162800 Glycine max HOM05D000553 ORTHO05D000460 1.2e-07 59.3 32 84.4
Psat0s3104g0120 Pisum sativum HOM05D000553 ORTHO05D000460 1.2e-07 59.3 32 78.1
TAR627G0006 Trochodendron aralioides HOM05D000553 ORTHO05D000460 1.5e-07 58.9 32 78.1
CSS0011137 Camellia sinensis var. sinensis HOM05D000553 ORTHO05D000460 2.0e-07 58.5 32 78.1
CSS0021514 Camellia sinensis var. sinensis HOM05D000553 ORTHO05D000460 2.0e-07 58.5 32 78.1
CAN.G213.19 Capsicum annuum HOM05D000553 ORTHO05D000460 2.0e-07 58.5 32 75.0
CiPaw.11G172100 Carya illinoinensis HOM05D000553 ORTHO05D000460 2.0e-07 58.5 32 78.1
DCAR_013120 Daucus carota HOM05D000553 ORTHO05D000460 2.0e-07 58.5 32 75.0
Phvul.005G074901 Phaseolus vulgaris HOM05D000553 ORTHO05D000460 2.0e-07 58.5 32 75.0
Ah.06g184560 Amaranthus hybridus HOM05D000553 ORTHO05D000460 2.6e-07 58.2 32 75.0
Peaxi162Scf00000g00303 Petunia axillaris HOM05D000553 ORTHO05D000460 2.6e-07 58.2 32 78.1
Lj3g0021761 Lotus japonicus HOM05D000553 ORTHO05D000460 3.4e-07 57.8 32 81.2
Nitab4.5_0005017g0040 Nicotiana tabacum HOM05D000553 ORTHO05D000460 3.4e-07 57.8 34 70.6
Phvul.011G163000 Phaseolus vulgaris HOM05D000553 ORTHO05D000460 3.4e-07 57.8 32 81.2
RcHm_v2.0_Chr3g0463261 Rosa chinensis HOM05D000553 ORTHO05D000460 3.4e-07 57.8 32 71.9
VMungo1127G0536 Vigna mungo HOM05D000553 ORTHO05D000460 3.4e-07 57.8 32 81.2
Dinv20200 Davidia involucrata HOM05D000553 ORTHO05D000460 4.4e-07 57.4 32 78.1
Glyma.12G226700 Glycine max HOM05D000553 ORTHO05D000460 4.4e-07 57.4 32 78.1
Atru.chr2.2412 Acer truncatum HOM05D000553 ORTHO05D000460 5.8e-07 57.0 32 75.0
FvH4_3g19470 Fragaria vesca HOM05D000553 ORTHO05D000460 5.8e-07 57.0 32 78.1
FAN11G3355 Fragaria x ananassa HOM05D000553 ORTHO05D000460 5.8e-07 57.0 32 78.1
FAN16G2913 Fragaria x ananassa HOM05D000553 ORTHO05D000460 5.8e-07 57.0 32 78.1
FAN25G0599 Fragaria x ananassa HOM05D000553 ORTHO05D000460 5.8e-07 57.0 32 78.1
Gohir.A01G061300 Gossypium hirsutum HOM05D000553 ORTHO05D000460 5.8e-07 57.0 32 75.0
Gohir.D01G047900 Gossypium hirsutum HOM05D000553 ORTHO05D000460 5.8e-07 57.0 32 75.0
Gorai.002G067700 Gossypium raimondii HOM05D000553 ORTHO05D000460 5.8e-07 57.0 32 75.0
Nitab4.5_0002330g0120 Nicotiana tabacum HOM05D000553 ORTHO05D000460 5.8e-07 57.0 32 75.0
Lalb_Chr01g0006601 Lupinus albus HOM05D000553 ORTHO05D000460 7.6e-07 56.6 31 80.6
VMungo1080G0790 Vigna mungo HOM05D000553 ORTHO05D000460 7.6e-07 56.6 32 75.0
AL8G29050 Arabidopsis lyrata HOM05D000553 ORTHO05D000460 9.9e-07 56.2 32 75.0
AT5G53940 Arabidopsis thaliana HOM05D000553 ORTHO05D000460 9.9e-07 56.2 32 75.0
Carub.0008s1425 Capsella rubella HOM05D000553 ORTHO05D000460 9.9e-07 56.2 32 75.0
CARHR267080 Cardamine hirsuta HOM05D000553 ORTHO05D000460 9.9e-07 56.2 32 75.0
Thhalv10015019m.g Eutrema salsugineum HOM05D000553 ORTHO05D000460 9.9e-07 56.2 32 75.0
Prupe.4G176300 Prunus persica HOM05D000553 ORTHO05D000460 9.9e-07 56.2 32 75.0
Hund22885 Selenicereus undatus HOM05D000553 ORTHO05D000460 9.9e-07 56.2 32 75.0
THA.LOC104825167 Tarenaya hassleriana HOM05D000553 ORTHO05D000460 9.9e-07 56.2 32 75.0
FAN09G0351 Fragaria x ananassa HOM05D000553 ORTHO05D000460 1.3e-06 55.8 31 71.0
Gorai.013G018700 Gossypium raimondii HOM05D000553 ORTHO05D000460 1.3e-06 55.8 32 68.8
HanXRQChr12g0370521 Helianthus annuus HOM05D000553 ORTHO05D000460 1.3e-06 55.8 32 68.8
HanXRQChr15g0495441 Helianthus annuus HOM05D000553 ORTHO05D000460 1.3e-06 55.8 32 71.9
Lsat_1_v5_gn_7_104620 Lactuca sativa HOM05D000553 ORTHO05D000460 1.3e-06 55.8 32 75.0
TWI39G1121 Tripterygium wilfordii HOM05D000553 ORTHO05D000460 1.3e-06 55.8 32 75.0
Aa31LG5G19490 Aethionema arabicum HOM05D000553 ORTHO05D000460 1.7e-06 55.5 32 68.8
Ciclev10009870m.g Citrus clementina HOM05D000553 ORTHO05D000460 1.7e-06 55.5 32 71.9
FvH4_6g11560 Fragaria vesca HOM05D000553 ORTHO05D000460 1.7e-06 55.5 31 71.0
FAN02G3104 Fragaria x ananassa HOM05D000553 ORTHO05D000460 1.7e-06 55.5 31 71.0
FAN14G1246 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-06 55.5 31 71.0
FAN14G3942 Fragaria x ananassa HOM05D000553 ORTHO05D000460 1.7e-06 55.5 31 71.0
Lj3g0009267 Lotus japonicus HOM05D000553 ORTHO05D000460 1.7e-06 55.5 32 71.9
MD03G1231600 Malus domestica HOM05D000553 ORTHO05D000460 1.7e-06 55.5 32 75.0
SalBow7G0556 Salvia bowleyana HOM05D000553 ORTHO05D000460 1.7e-06 55.5 32 75.0
TPR.G32102 Trifolium pratense HOM05D000553 ORTHO05D000460 1.7e-06 55.5 32 75.0
BcaB05g22093 Brassica carinata HOM05D000553 ORTHO05D000460 2.2e-06 55.1 32 71.9
A10p11300 Brassica napus HOM05D000553 ORTHO05D000460 2.2e-06 55.1 32 71.9
BraA10t43222Z Brassica rapa HOM05D000553 ORTHO05D000460 2.2e-06 55.1 32 71.9
Ca_23042_v3 Cicer arietinum L. HOM05D000553 ORTHO05D000460 2.2e-06 55.1 32 75.0
CsaV3_5G009020 Cucumis sativus L. HOM05D000553 ORTHO05D000460 2.2e-06 55.1 34 64.7
Sp6g16020 Schrenkiella parvula HOM05D000553 ORTHO05D000460 2.2e-06 55.1 32 71.9
Solyc07g062880.3 Solanum lycopersicum HOM05D000553 ORTHO05D000460 2.2e-06 55.1 32 68.8
Sopen07g031080 Solanum pennellii HOM05D000553 ORTHO05D000460 2.2e-06 55.1 32 68.8
TPR.G2519 Trifolium pratense HOM05D000553 ORTHO05D000460 2.2e-06 55.1 32 62.5
ClCG03G008050 Citrullus lanatus HOM05D000553 ORTHO05D000460 2.9e-06 54.7 32 68.8
Gohir.A05G329500 Gossypium hirsutum HOM05D000553 ORTHO05D000460 2.9e-06 54.7 32 68.8
Gohir.D04G067500 Gossypium hirsutum HOM05D000553 ORTHO05D000460 2.9e-06 54.7 32 68.8
Hma1.2p1_0446F.1_g154560 Hydrangea macrophylla HOM05D000553 ORTHO05D000460 2.9e-06 54.7 32 65.6
MD05G1311500 Malus domestica HOM05D000553 ORTHO05D000460 2.9e-06 54.7 32 71.9
RcHm_v2.0_Chr5g0008981 Rosa chinensis HOM05D000553 ORTHO05D000460 2.9e-06 54.7 32 75.0
Thecc.07G095800 Theobroma cacao HOM05D000553 ORTHO05D000460 2.9e-06 54.7 32 71.9
Aa31LG3G10020 Aethionema arabicum HOM05D012500 ORTHO05D009211 3.7e-06 54.3 32 71.9
CAN.G162.37 Capsicum annuum HOM05D000553 ORTHO05D000460 3.7e-06 54.3 32 68.8
ClCG11G006240 Citrullus lanatus HOM05D000553 ORTHO05D000460 3.7e-06 54.3 32 65.6
CsaV3_1G012500 Cucumis sativus L. HOM05D000553 ORTHO05D000460 3.7e-06 54.3 32 68.8
Dinv17341 Davidia involucrata HOM05D000553 ORTHO05D000460 3.7e-06 54.3 32 71.9
Duzib106G1055 Durio zibethinus HOM05D000553 ORTHO05D000460 3.7e-06 54.3 32 68.8
Migut.M00781 Erythranthe guttata HOM05D000553 ORTHO05D000460 3.7e-06 54.3 32 71.9
Gohir.D13G016900 Gossypium hirsutum HOM05D000553 ORTHO05D000460 3.7e-06 54.3 32 65.6
Oeu005402.2 Olea europaea HOM05D000553 ORTHO05D000460 3.7e-06 54.3 32 68.8
TAR623G0400 Trochodendron aralioides HOM05D000553 ORTHO05D000460 3.7e-06 54.3 32 62.5
unitig_747.g21416 Utricularia gibba HOM05D000553 ORTHO05D000460 3.7e-06 54.3 32 68.8
Ah.16g103430 Amaranthus hybridus HOM05D000553 ORTHO05D000460 4.9e-06 53.9 32 59.4
BcaC04g20403 Brassica carinata HOM05D000553 ORTHO05D000460 4.9e-06 53.9 32 68.8
BolC9t57280H Brassica oleracea HOM05D000553 ORTHO05D000460 4.9e-06 53.9 32 68.8
COL.COLO4_36714 Corchorus olitorius HOM05D000553 ORTHO05D000460 4.9e-06 53.9 32 68.8
MELO3C025175.2 Cucumis melo HOM05D000553 ORTHO05D000460 4.9e-06 53.9 32 62.5
Gohir.D05G348000 Gossypium hirsutum HOM05D000553 ORTHO05D000460 4.9e-06 53.9 32 68.8
Gorai.009G375800 Gossypium raimondii HOM05D000553 ORTHO05D000460 4.9e-06 53.9 32 68.8
Potri.008G067100 Populus trichocarpa HOM05D000553 ORTHO05D000460 4.9e-06 53.9 32 62.5
Rhsim02G0133300 Rhododendron simsii HOM05D000553 ORTHO05D000460 4.9e-06 53.9 51 56.9
Sed0019405 Sechium edule HOM05D000553 ORTHO05D000460 4.9e-06 53.9 32 65.6
Sc11g0005000 Simmondsia chinensis HOM05D000553 ORTHO05D000460 4.9e-06 53.9 32 62.5
Thecc.10G020500 Theobroma cacao HOM05D000553 ORTHO05D000460 4.9e-06 53.9 32 65.6
vmacro15925 Vaccinium macrocarpon HOM05D000553 ORTHO05D000460 4.9e-06 53.9 32 71.9
HPP92_015496 Vanilla planifolia HOM05D000553 ORTHO05D000460 4.9e-06 53.9 32 65.6
Actinidia20728 Actinidia chinensis HOM05D000553 ORTHO05D000460 6.4e-06 53.5 32 65.6
Ah.14g089650 Amaranthus hybridus HOM05D000553 ORTHO05D000460 6.4e-06 53.5 32 71.9
CiPaw.10G051800 Carya illinoinensis HOM05D000553 ORTHO05D000460 6.4e-06 53.5 32 68.8
ECA236G4021 Erigeron canadensis HOM05D000553 ORTHO05D009211 6.4e-06 53.5 32 65.6
Eucgr.F01163 Eucalyptus grandis HOM05D000553 ORTHO05D000460 6.4e-06 53.5 32 68.8
Thhalv10022021m.g Eutrema salsugineum HOM05D000553 ORTHO05D020606 6.4e-06 53.5 32 59.4
Gohir.A11G329400 Gossypium hirsutum HOM05D000553 ORTHO05D000460 6.4e-06 53.5 32 68.8
Gohir.D11G348500 Gossypium hirsutum HOM05D000553 ORTHO05D000460 6.4e-06 53.5 32 68.8
HanXRQChr08g0222131 Helianthus annuus HOM05D000553 ORTHO05D000460 6.4e-06 53.5 32 68.8
MD07G1220400 Malus domestica HOM05D000553 ORTHO05D000460 6.4e-06 53.5 32 62.5
RcHm_v2.0_Chr5g0032731 Rosa chinensis HOM05D000553 ORTHO05D000460 6.4e-06 53.5 32 71.9
Sabra08G0049300 Salix brachista HOM05D000553 ORTHO05D000460 6.4e-06 53.5 57 49.1
Sp4g22420 Schrenkiella parvula HOM05D000553 ORTHO05D000460 6.4e-06 53.5 32 62.5
Aqoxy2G00922 Aquilegia oxysepala HOM05D000553 ORTHO05D000460 8.4e-06 53.1 32 62.5
A02p10680 Brassica napus HOM05D000553 ORTHO05D000460 8.4e-06 53.1 32 68.8
AUR62022869 Chenopodium quinoa HOM05D000553 ORTHO05D000460 8.4e-06 53.1 33 57.6
ECA233G6106 Erigeron canadensis HOM05D000553 ORTHO05D000460 8.4e-06 53.1 32 65.6
Gohir.A04G035400 Gossypium hirsutum HOM05D000553 ORTHO05D000460 8.4e-06 53.1 32 68.8
Gorai.007G378800 Gossypium raimondii HOM05D000553 ORTHO05D000460 8.4e-06 53.1 32 65.6
LjContig00357g0010180 Lotus japonicus HOM05D000553 ORTHO05D000460 8.4e-06 53.1 32 65.6
Mapoly0011s0154 Marchantia polymorpha HOM05D000553 ORTHO05D000460 8.4e-06 53.1 32 62.5
Medtr8g058785 Medicago truncatula HOM05D000553 ORTHO05D000460 8.4e-06 53.1 32 71.9
Medtr8g061270 Medicago truncatula HOM05D000553 ORTHO05D000460 8.4e-06 53.1 32 71.9
Oeu033600.1 Olea europaea HOM05D000553 ORTHO05D000460 8.4e-06 53.1 32 59.4
Pp3c1_29420 Physcomitrium patens HOM05D000553 ORTHO05D000460 8.4e-06 53.1 32 59.4
Potri.011G115700 Populus trichocarpa HOM05D000553 ORTHO05D000460 8.4e-06 53.1 32 71.9
Sabra16G0260200 Salix brachista HOM05D000553 ORTHO05D020606 8.4e-06 53.1 32 71.9
THA.LOC104826855 Tarenaya hassleriana HOM05D000553 ORTHO05D000460 8.4e-06 53.1 32 62.5


User provided reference genes

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