Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2024 Trochodendron aralioides HOM05D009454 ORTHO05D009427 6.2e-70 267.3 131 100.0
TAR627G0356 Trochodendron aralioides HOM05D009454 ORTHO05D009427 2.6e-44 182.2 133 72.2
TAR626G0489 Trochodendron aralioides HOM05D009454 ORTHO05D009427 7.1e-34 147.5 133 54.9
TAR624G0118 Trochodendron aralioides HOM05D009454 ORTHO05D009427 3.4e-28 128.6 134 52.2
Nn1g06922 Nelumbo nucifera HOM05D009454 ORTHO05D009427 2.8e-22 109.0 132 48.5
Dinv18549 Davidia involucrata HOM05D014456 ORTHO05D011476 1.9e-18 96.3 132 44.7
MBI02_g26224_MAGBIO Magnolia biondii HOM05D009454 ORTHO05D009427 2.5e-18 95.9 127 45.7
Nn1g03746 Nelumbo nucifera HOM05D009454 ORTHO05D009427 6.0e-17 91.3 110 47.3
Dinv03958 Davidia involucrata HOM05D009454 ORTHO05D009427 7.9e-17 90.9 135 41.5
Prupe.4G197700 Prunus persica HOM05D009454 ORTHO05D009427 7.9e-17 90.9 133 42.9
CiPaw.11G180600 Carya illinoinensis HOM05D009454 ORTHO05D009427 3.0e-16 89.0 141 40.4
Aqoxy4G01911 Aquilegia oxysepala HOM05D035254 ORTHO05D031288 5.1e-16 88.2 137 40.9
Dinv10899 Davidia involucrata HOM05D012535 ORTHO05D011476 1.1e-15 87.0 135 40.0
Duzib170G0628 Durio zibethinus HOM05D009454 ORTHO05D009427 3.3e-15 85.5 137 41.6
Haze_09576 Corylus avellana HOM05D009454 ORTHO05D009427 5.7e-15 84.7 139 40.3
GSVIVG01030651001 Vitis vinifera HOM05D015989 ORTHO05D011476 2.8e-14 82.4 135 39.3
Actinidia35306 Actinidia chinensis HOM05D009454 ORTHO05D009427 8.2e-14 80.9 134 41.0
Manes.15G079100 Manihot esculenta HOM05D020515 ORTHO05D009427 8.2e-14 80.9 141 38.3
ClCG10G006150 Citrullus lanatus HOM05D023599 ORTHO05D009427 1.8e-13 79.7 146 39.7
Sed0000886 Sechium edule HOM05D023599 ORTHO05D009427 4.1e-13 78.6 134 39.6
MD11G1229800 Malus domestica HOM05D023596 ORTHO05D009427 9.0e-13 77.4 136 40.4
Actinidia10697 Actinidia chinensis HOM05D009454 ORTHO05D009427 2.0e-12 76.3 135 35.6
Ciclev10009866m.g Citrus clementina HOM05D009454 ORTHO05D009427 2.6e-12 75.9 143 39.2
Duzib213G0681 Durio zibethinus HOM05D009454 ORTHO05D009427 2.6e-12 75.9 146 37.7
Phvul.011G145600 Phaseolus vulgaris HOM05D012347 ORTHO05D009427 3.4e-12 75.5 135 37.0
PSO541G4004 Papaver somniferum HOM05D023599 ORTHO05D009427 1.3e-11 73.6 161 36.6
Lalb_Chr19g0134651 Lupinus albus HOM05D012347 ORTHO05D009427 2.2e-11 72.8 143 36.4
Hund02152 Selenicereus undatus HOM05D017899 ORTHO05D009427 3.8e-11 72.0 141 36.9
Ca_18836_v3 Cicer arietinum L. HOM05D012347 ORTHO05D009427 6.5e-11 71.2 139 36.0
Ca_30095_v3 Cicer arietinum L. HOM05D012347 ORTHO05D009427 6.5e-11 71.2 139 36.0
MELO3C016602.2 Cucumis melo HOM05D023599 ORTHO05D009427 8.4e-11 70.9 146 36.3
Gohir.A04G023500 Gossypium hirsutum HOM05D009454 ORTHO05D009427 1.1e-10 70.5 145 35.9
Gorai.009G428800 Gossypium raimondii HOM05D009454 ORTHO05D009427 5.5e-10 68.2 145 34.5
Psat7g160160 Pisum sativum HOM05D012347 ORTHO05D009427 5.5e-10 68.2 133 35.3
TPR.G34097 Trifolium pratense HOM05D012347 ORTHO05D009427 5.5e-10 68.2 132 34.8
Glyma.06G263300 Glycine max HOM05D012347 ORTHO05D009427 1.2e-09 67.0 142 35.9
Oeu042882.1 Olea europaea HOM05D017288 ORTHO05D017865 1.6e-09 66.6 134 39.6
Thecc.07G059700 Theobroma cacao HOM05D009454 ORTHO05D009427 1.6e-09 66.6 148 35.1
CsaV3_3G005700 Cucumis sativus L. HOM05D023599 ORTHO05D009427 2.1e-09 66.2 149 35.6
Potri.011G130400 Populus trichocarpa HOM05D020515 ORTHO05D009427 2.1e-09 66.2 139 37.4
Gohir.D05G363800 Gossypium hirsutum HOM05D009454 ORTHO05D009427 2.7e-09 65.9 145 33.1
EL10Ac4g08003 Beta vulgaris HOM05D017899 ORTHO05D009427 6.1e-09 64.7 142 35.9
Gohir.D01G059100 Gossypium hirsutum HOM05D009454 ORTHO05D009427 7.9e-09 64.3 137 33.6
THA.LOC104809286 Tarenaya hassleriana HOM05D010083 ORTHO05D009427 7.9e-09 64.3 137 38.7
TWI38G2011 Tripterygium wilfordii HOM05D010083 ORTHO05D009427 1.3e-08 63.5 152 35.5
Manes.03G120500 Manihot esculenta HOM05D020515 ORTHO05D009427 1.8e-08 63.2 142 35.9
Potri.001G409600 Populus trichocarpa HOM05D020515 ORTHO05D009427 1.8e-08 63.2 139 31.7
TWI38G2182 Tripterygium wilfordii HOM05D009454 ORTHO05D009427 1.8e-08 63.2 153 35.3
Gohir.A01G072300 Gossypium hirsutum HOM05D009454 ORTHO05D009427 2.3e-08 62.8 137 34.3
MD03G1215100 Malus domestica HOM05D009454 ORTHO05D009427 2.3e-08 62.8 111 36.9
Aqoxy1G03831 Aquilegia oxysepala HOM05D009454 ORTHO05D009427 3.0e-08 62.4 136 33.1
FvH4_3g21550 Fragaria vesca HOM05D023596 ORTHO05D029380 3.0e-08 62.4 93 40.9
FAN11G2805 Fragaria x ananassa HOM05D023596 ORTHO05D029380 3.0e-08 62.4 93 40.9
Gorai.002G080100 Gossypium raimondii HOM05D009454 ORTHO05D009427 3.0e-08 62.4 137 33.6
MBI18_g26693_MAGBIO Magnolia biondii HOM05D009454 ORTHO05D009427 3.9e-08 62.0 92 44.6
Actinidia39291 Actinidia chinensis HOM05D014456 ORTHO05D011476 5.1e-08 61.6 132 35.6
Migut.M01827 Erythranthe guttata HOM05D017288 ORTHO05D009427 6.7e-08 61.2 136 36.0
Migut.H01874 Erythranthe guttata HOM05D017288 ORTHO05D009427 8.7e-08 60.8 136 37.5
Medtr4g081500 Medicago truncatula HOM05D012347 ORTHO05D009427 8.7e-08 60.8 138 36.2
PGR031G1751 Punica granatum HOM05D009454 ORTHO05D009427 8.7e-08 60.8 103 35.0
Atru.chr2.3110 Acer truncatum HOM05D010083 ORTHO05D009427 1.1e-07 60.5 134 32.8
Atru.chr2.3135 Acer truncatum HOM05D010083 ORTHO05D009427 1.1e-07 60.5 134 32.8
TWI36G0330 Tripterygium wilfordii HOM05D035254 ORTHO05D031288 1.9e-07 59.7 140 34.3
FAN16G3060 Fragaria x ananassa HOM05D023596 ORTHO05D029380 2.5e-07 59.3 93 39.8
FAN25G2266 Fragaria x ananassa HOM05D023596 ORTHO05D029380 2.5e-07 59.3 93 39.8
CiPaw.03G164400 Carya illinoinensis HOM05D029042 ORTHO05D015201 4.3e-07 58.5 132 38.6
Solyc07g063910.4 Solanum lycopersicum HOM05D017076 ORTHO05D017865 5.7e-07 58.2 134 35.8
arahy.Tifrunner.gnm1.ann1.AXBA9A Arachis hypogaea HOM05D062896 ORTHO05D009427 7.4e-07 57.8 164 30.5
arahy.Tifrunner.gnm1.ann1.4E7PXM Arachis hypogaea HOM05D012347 ORTHO05D009427 9.7e-07 57.4 142 32.4
arahy.Tifrunner.gnm1.ann1.T2T8RF Arachis hypogaea HOM05D012347 ORTHO05D009427 1.3e-06 57.0 142 32.4
CSS0024806 Camellia sinensis var. sinensis HOM05D014456 ORTHO05D011476 1.3e-06 57.0 131 34.4
Lj3g0021987 Lotus japonicus HOM05D012347 ORTHO05D009427 2.8e-06 55.8 140 28.6
Ah.04g165150 Amaranthus hybridus HOM05D017899 ORTHO05D009427 3.7e-06 55.5 79 39.2
CSS0035572 Camellia sinensis var. sinensis HOM05D014456 ORTHO05D011476 3.7e-06 55.5 131 33.6
Actinidia12487 Actinidia chinensis HOM05D014456 ORTHO05D011476 4.8e-06 55.1 132 31.1
MSTRG.12947 Avicennia marina HOM05D017288 ORTHO05D009427 4.8e-06 55.1 134 35.8
CSS0036879 Camellia sinensis var. sinensis HOM05D014456 ORTHO05D011476 4.8e-06 55.1 136 32.4
Carub.0008s1485 Capsella rubella HOM05D010083 ORTHO05D009427 6.3e-06 54.7 93 40.9
Nitab4.5_0001134g0120 Nicotiana tabacum HOM05D012535 ORTHO05D011476 6.3e-06 54.7 148 31.8
PGR142G3426 Punica granatum HOM05D017922 ORTHO05D015201 8.2e-06 54.3 135 37.8


User provided reference genes

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