Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 2.9e-276 954.5 451 100.0
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 2.6e-200 702.2 425 76.7
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 4.4e-200 701.4 427 76.6
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 1.8e-198 696.0 428 75.7
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 7.8e-197 690.6 428 75.9
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 2.8e-194 682.2 428 74.5
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 5.8e-192 674.5 427 74.7
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 3.7e-191 671.8 427 74.5
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 3.7e-191 671.8 427 74.5
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 2.0e-189 666.0 425 73.4
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 2.7e-189 665.6 427 74.0
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 1.1e-187 660.2 427 71.9
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 1.5e-187 659.8 421 74.3
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 8.0e-186 654.1 425 72.0
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 3.1e-185 652.1 428 70.6
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 1.5e-184 649.8 427 71.7
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 5.8e-184 647.9 425 69.9
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 5.8e-184 647.9 425 71.1
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 1.3e-183 646.7 420 71.7
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 1.7e-183 646.4 426 71.6
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.4e-182 643.3 421 71.3
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 1.4e-182 643.3 428 69.6
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 2.4e-182 642.5 434 69.8
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 9.2e-182 640.6 423 70.4
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 2.1e-181 639.4 425 70.4
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 3.5e-181 638.6 426 70.7
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 6.0e-181 637.9 423 71.2
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 7.8e-181 637.5 421 70.5
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 2.3e-180 636.0 426 69.2
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 2.3e-180 636.0 425 70.6
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 3.0e-180 635.6 422 69.2
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 3.0e-180 635.6 426 70.4
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 3.0e-180 635.6 424 68.6
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 3.0e-180 635.6 423 70.4
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 3.9e-180 635.2 426 69.7
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 8.6e-180 634.0 427 69.6
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 1.1e-179 633.6 421 70.1
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.1e-179 633.6 419 71.6
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 1.5e-179 633.3 423 69.3
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 1.5e-179 633.3 426 68.8
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 1.9e-179 632.9 428 70.1
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 2.5e-179 632.5 421 71.0
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 3.3e-179 632.1 423 69.3
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 4.3e-179 631.7 424 70.3
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 4.3e-179 631.7 420 69.5
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 5.6e-179 631.3 431 67.5
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 7.3e-179 630.9 422 68.7
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 7.3e-179 630.9 422 68.2
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 7.3e-179 630.9 428 69.6
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 9.5e-179 630.6 425 69.6
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 9.5e-179 630.6 425 69.6
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 9.5e-179 630.6 421 70.1
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 1.6e-178 629.8 423 70.0
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.6e-178 629.8 424 70.0
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 2.1e-178 629.4 421 70.3
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 2.1e-178 629.4 422 69.0
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 2.8e-178 629.0 428 67.5
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 3.6e-178 628.6 422 68.7
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 3.6e-178 628.6 422 68.5
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 4.7e-178 628.2 422 68.7
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 4.7e-178 628.2 425 69.4
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 8.1e-178 627.5 423 68.6
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 1.1e-177 627.1 424 68.6
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 1.8e-177 626.3 424 69.3
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 2.3e-177 625.9 422 67.8
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 6.8e-177 624.4 419 70.4
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 8.9e-177 624.0 425 67.5
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 1.7e-175 619.8 420 68.1
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 8.3e-175 617.5 427 67.7
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 1.9e-174 616.3 425 67.5
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 1.6e-173 613.2 427 68.6
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 3.5e-173 612.1 430 68.1
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 4.6e-173 611.7 371 75.7
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 6.0e-173 611.3 425 67.1
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 7.8e-173 610.9 376 73.9
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 1.3e-172 610.1 421 68.9
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 1.3e-172 610.1 421 68.4
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 5.1e-172 608.2 355 76.6
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 5.1e-172 608.2 428 67.8
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 6.6e-172 607.8 424 66.0
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 1.1e-171 607.1 425 65.6
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.9e-171 606.3 424 67.5
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 4.3e-171 605.1 419 66.8
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 5.6e-171 604.7 348 77.9
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 1.6e-170 603.2 423 66.2
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 2.8e-170 602.4 424 65.3
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 3.6e-170 602.1 424 65.8
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 4.7e-170 601.7 421 65.6
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 3.1e-169 599.0 419 64.4
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 1.2e-168 597.0 419 65.2
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 1.2e-168 597.0 423 66.4
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 1.5e-168 596.7 421 64.6
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 1.5e-168 596.7 423 66.4
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 1.5e-168 596.7 428 66.6
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 1.5e-168 596.7 429 64.6
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 3.4e-168 595.5 383 70.8
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 7.6e-168 594.3 423 66.2
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.3e-167 593.6 426 67.4
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 6.4e-167 591.3 422 65.2
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 6.4e-167 591.3 422 65.2
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 6.4e-167 591.3 423 67.6
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 1.9e-166 589.7 422 65.4
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 2.7e-165 585.9 338 76.6
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 3.5e-165 585.5 357 72.5
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 6.0e-165 584.7 432 62.3
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 2.3e-164 582.8 335 76.1
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 2.5e-163 579.3 361 70.6
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 2.0e-160 569.7 353 71.7
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 8.4e-159 564.3 424 64.2
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 2.5e-155 552.7 401 64.8
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 1.1e-153 547.4 361 66.8
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 1.0e-148 530.8 427 61.4
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 4.3e-139 498.8 282 75.9
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 1.1e-137 494.2 294 73.8
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 1.4e-137 493.8 357 63.9
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 4.9e-135 485.3 360 62.2
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 9.3e-134 481.1 354 61.0
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 3.1e-129 466.1 358 62.3
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 9.7e-115 417.9 322 63.0
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 1.1e-102 377.9 358 53.9
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 1.0e-100 371.3 220 73.2
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 2.8e-98 363.2 211 76.8
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 3.7e-98 362.8 209 74.6
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 2.6e-91 340.1 286 54.5
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 6.2e-61 239.2 229 55.9
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 5.6e-54 216.1 371 39.4
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 2.3e-31 141.0 94 61.7
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 5.5e-25 119.8 84 66.7
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 2.1e-24 117.9 80 60.0
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 2.1e-16 91.3 118 44.9
CSS0018959 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D112597 1.0e-07 62.4 58 50.0


User provided reference genes

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