Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 5.5e-159 564.3 296 100.0
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 8.9e-125 450.7 294 77.9
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 5.9e-121 438.0 290 77.2
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 2.5e-119 432.6 294 74.5
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 4.0e-117 425.2 292 74.7
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 1.2e-116 423.7 303 72.3
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 2.2e-115 419.5 298 72.5
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 2.4e-114 416.0 295 72.9
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 1.7e-112 409.8 293 73.4
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 7.3e-111 404.4 294 71.1
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 1.6e-110 403.3 295 69.5
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 4.7e-110 401.7 294 70.1
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 8.1e-110 401.0 294 69.7
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 3.1e-109 399.1 292 68.8
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 3.1e-109 399.1 292 71.2
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 5.2e-109 398.3 298 68.8
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 1.5e-108 396.7 297 69.7
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 2.0e-108 396.4 295 69.2
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 1.3e-107 393.7 285 69.8
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 1.3e-107 393.7 280 70.0
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 1.7e-107 393.3 301 68.4
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 1.7e-107 393.3 280 70.7
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 4.9e-107 391.7 297 69.0
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 6.4e-107 391.3 282 70.2
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 8.3e-107 391.0 280 70.0
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 1.4e-106 390.2 283 73.1
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 1.4e-106 390.2 296 67.9
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 1.9e-106 389.8 292 69.2
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 3.2e-106 389.0 296 66.9
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 3.2e-106 389.0 292 69.2
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 4.1e-106 388.7 281 70.8
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 4.1e-106 388.7 297 67.3
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.2e-105 387.1 301 67.4
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 1.6e-105 386.7 300 69.3
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 4.6e-105 385.2 263 72.6
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 7.8e-105 384.4 298 65.1
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 1.1e-103 380.6 256 73.4
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 1.9e-103 379.8 248 73.8
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 7.3e-103 377.9 241 75.9
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 9.5e-103 377.5 299 67.9
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 1.2e-102 377.1 260 70.8
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 1.6e-102 376.7 299 66.9
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 2.1e-102 376.3 301 67.4
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 2.1e-102 376.3 252 73.0
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 2.1e-102 376.3 295 66.4
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 3.6e-102 375.6 299 67.6
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 8.1e-102 374.4 248 73.0
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.8e-101 373.2 298 67.1
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 3.1e-101 372.5 298 67.1
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 5.2e-101 371.7 283 68.9
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 1.2e-100 370.5 252 71.0
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 2.6e-100 369.4 298 63.8
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 3.4e-100 369.0 266 72.2
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 5.8e-100 368.2 244 73.8
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 1.3e-99 367.1 255 70.6
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 2.2e-99 366.3 241 75.5
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 2.9e-99 365.9 293 65.5
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 3.8e-99 365.5 297 65.0
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 1.1e-98 364.0 300 63.7
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 1.1e-98 364.0 300 63.7
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 2.1e-97 359.8 286 66.4
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 2.7e-97 359.4 252 70.6
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 2.7e-97 359.4 268 68.3
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 3.5e-97 359.0 286 66.4
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 1.7e-96 356.7 256 70.7
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 2.3e-96 356.3 267 68.2
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 3.9e-96 355.5 284 64.8
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 3.9e-96 355.5 287 65.5
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 3.9e-96 355.5 249 71.9
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 8.6e-96 354.4 272 68.4
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 8.6e-96 354.4 295 64.4
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 5.6e-95 351.7 288 63.2
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 9.6e-95 350.9 234 72.6
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 3.6e-94 349.0 292 63.7
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 6.2e-94 348.2 258 67.1
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 1.8e-93 346.7 249 69.9
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 5.2e-93 345.1 301 61.5
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 9.9e-92 340.9 247 70.0
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 1.3e-91 340.5 266 66.9
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 1.3e-91 340.5 278 64.7
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 7.1e-90 334.7 260 67.3
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 2.7e-89 332.8 253 66.8
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 1.0e-88 330.9 224 74.6
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 1.3e-88 330.5 250 64.8
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 1.5e-87 327.0 239 69.5
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 5.6e-87 325.1 233 70.0
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 9.0e-85 317.8 235 66.8
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 7.6e-84 314.7 236 66.1
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 9.9e-84 314.3 235 66.4
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 1.9e-82 310.1 244 67.2
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 2.7e-81 306.2 246 65.4
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 3.0e-80 302.8 226 67.3
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 3.9e-80 302.4 201 75.1
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 6.7e-80 301.6 210 71.4
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 1.6e-73 280.4 294 54.4
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 1.4e-69 267.3 187 71.7
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 6.9e-61 238.4 254 52.8
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 3.4e-60 236.1 227 54.6
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.3e-56 224.2 298 48.0
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 5.7e-55 218.8 143 76.9
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 1.6e-54 217.2 227 46.7
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 2.0e-44 183.7 245 46.1
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 6.1e-41 172.2 236 41.1
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 1.1e-39 167.9 230 40.9
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 3.8e-35 152.9 244 38.5
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 2.7e-33 146.7 99 76.8
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 1.2e-28 131.3 231 39.4
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 1.3e-22 111.3 93 59.1
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 7.0e-21 105.5 114 50.0
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 3.8e-19 99.8 97 56.7
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 1.2e-12 78.2 54 63.0
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 2.0e-12 77.4 61 62.3
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 4.5e-12 76.3 104 47.1
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 1.9e-10 70.9 53 60.4
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.4e-08 64.7 46 65.2
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 2.3e-08 63.9 70 50.0
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 2.3e-08 63.9 70 50.0
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 6.8e-08 62.4 70 48.6
Rhsim03G0260900 Rhododendron simsii HOM05D021265 ORTHO05D339689 2.2e-06 57.4 49 55.1


User provided reference genes

Program Settings