Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 4.2e-113 411.4 210 100.0
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 6.0e-75 284.6 208 71.2
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 9.5e-73 277.3 213 65.7
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 9.5e-73 277.3 213 65.7
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 1.2e-72 276.9 217 66.4
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 8.1e-72 274.2 217 65.4
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.6e-70 269.2 214 64.0
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.6e-70 269.2 214 64.0
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 2.4e-68 262.7 226 60.6
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 4.6e-67 258.5 217 61.3
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 1.0e-66 257.3 217 60.4
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 8.6e-66 254.2 219 61.6
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 1.1e-65 253.8 218 61.0
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 1.5e-65 253.4 218 58.7
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 3.3e-65 252.3 218 60.6
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 3.3e-65 252.3 218 60.1
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 1.2e-64 250.4 210 60.5
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 1.6e-64 250.0 217 59.0
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.4e-63 246.9 210 59.5
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 3.1e-63 245.7 213 60.6
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 3.1e-63 245.7 218 59.6
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 4.0e-63 245.4 210 59.5
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 5.2e-63 245.0 215 59.5
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.5e-62 243.4 215 59.1
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 1.5e-62 243.4 215 58.6
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 1.5e-62 243.4 215 59.1
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 2.0e-62 243.0 221 57.9
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 2.0e-62 243.0 215 60.5
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 2.0e-62 243.0 211 59.2
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 7.6e-62 241.1 204 60.3
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 9.9e-62 240.7 207 60.4
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 2.2e-61 239.6 211 60.7
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 3.8e-61 238.8 218 57.3
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 3.8e-61 238.8 217 59.0
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 3.8e-61 238.8 210 60.0
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 3.8e-61 238.8 211 61.6
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 4.9e-61 238.4 207 58.5
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.9e-60 236.5 215 57.7
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 1.9e-60 236.5 213 58.7
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.4e-60 236.1 211 59.7
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 9.3e-60 234.2 208 56.2
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 9.3e-60 234.2 207 60.4
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 1.2e-59 233.8 193 61.7
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 1.6e-59 233.4 208 55.8
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 1.6e-59 233.4 215 56.3
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 3.5e-59 232.3 200 62.0
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 6.0e-59 231.5 206 58.3
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 6.0e-59 231.5 208 59.1
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 6.0e-59 231.5 207 58.0
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 1.3e-58 230.3 210 59.0
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 1.3e-58 230.3 207 57.5
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 1.7e-58 229.9 208 57.2
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 1.7e-58 229.9 186 61.3
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 2.3e-58 229.6 216 56.5
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 2.3e-58 229.6 205 59.0
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 3.0e-58 229.2 216 57.9
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 3.9e-58 228.8 186 61.3
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 6.6e-58 228.0 187 61.5
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 8.7e-58 227.6 216 58.3
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 1.1e-57 227.3 217 58.1
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 4.3e-57 225.3 194 58.2
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 5.6e-57 224.9 214 54.7
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 5.6e-57 224.9 215 55.3
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 5.6e-57 224.9 207 58.9
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 9.6e-57 224.2 219 58.0
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 1.3e-56 223.8 188 60.1
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 1.3e-56 223.8 217 55.8
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.8e-56 222.6 219 57.5
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 3.1e-55 219.2 211 55.9
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 1.2e-54 217.2 208 56.2
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 1.2e-54 217.2 208 54.8
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 1.5e-54 216.9 183 60.1
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.0e-54 216.5 219 56.2
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 2.2e-53 213.0 217 52.5
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 4.9e-53 211.8 214 57.0
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 6.4e-53 211.5 233 48.1
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 1.4e-52 210.3 191 58.1
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 4.2e-52 208.8 211 53.1
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 9.3e-52 207.6 191 58.1
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 9.3e-52 207.6 280 46.1
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 3.5e-51 205.7 211 53.1
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 3.5e-51 205.7 182 56.6
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 2.3e-50 203.0 223 49.8
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 3.0e-50 202.6 212 51.9
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 5.1e-50 201.8 160 63.8
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 7.3e-49 198.0 193 54.4
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 2.1e-48 196.4 175 58.3
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 1.5e-46 190.3 209 50.7
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 1.5e-46 190.3 208 50.5
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 4.5e-46 188.7 209 49.3
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 2.2e-45 186.4 209 49.3
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 6.4e-45 184.9 172 55.8
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 1.1e-44 184.1 209 49.8
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 1.1e-44 184.1 209 49.8
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 9.3e-44 181.0 174 58.0
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 1.1e-41 174.1 133 63.9
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 1.1e-41 174.1 186 52.2
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 1.9e-41 173.3 177 52.5
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 2.5e-41 172.9 215 47.4
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 4.3e-41 172.2 181 51.4
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 8.1e-40 167.9 206 49.5
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 2.0e-38 163.3 133 60.2
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 2.0e-38 163.3 139 58.3
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 4.5e-38 162.2 188 49.5
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 4.5e-38 162.2 114 71.1
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 5.8e-38 161.8 208 44.2
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 1.6e-35 153.7 208 42.8
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 3.3e-33 146.0 151 53.6
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 1.4e-31 140.6 133 54.1
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 5.1e-26 122.1 103 58.3
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 4.5e-22 109.0 87 62.1
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 3.6e-19 99.4 149 43.6
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.5e-14 84.0 60 68.3
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 3.2e-12 76.3 178 29.8
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 8.8e-10 68.2 69 56.5
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 1.1e-09 67.8 67 49.3


User provided reference genes

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