Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 5.1e-296 1020.4 536 100.0
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 4.0e-240 834.7 540 81.3
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 1.4e-229 799.7 536 76.7
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 2.7e-228 795.4 542 75.5
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 1.0e-227 793.5 532 78.6
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 1.9e-226 789.3 540 76.3
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 2.5e-226 788.9 523 78.8
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 2.1e-225 785.8 482 82.6
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 6.8e-224 780.8 503 80.1
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 2.2e-222 775.8 536 77.1
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 2.2e-222 775.8 525 78.3
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 3.1e-221 771.9 500 79.0
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 2.9e-219 765.4 533 74.3
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 1.1e-218 763.5 477 80.5
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 1.1e-218 763.5 527 75.0
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 2.5e-218 762.3 464 83.6
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 5.6e-218 761.1 500 77.8
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 1.4e-216 756.5 470 79.1
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 4.0e-216 755.0 536 73.5
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 6.8e-216 754.2 517 75.6
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 2.6e-215 752.3 484 77.3
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 4.9e-214 748.0 532 74.1
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 8.3e-214 747.3 484 76.7
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 4.1e-213 745.0 470 79.1
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 5.4e-213 744.6 510 74.1
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 7.0e-213 744.2 533 72.6
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.7e-212 742.3 519 74.2
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 5.9e-212 741.1 532 72.2
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 5.9e-212 741.1 542 71.2
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 7.8e-212 740.7 477 76.9
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 3.0e-211 738.8 537 71.9
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 6.6e-211 737.6 527 72.5
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 1.9e-210 736.1 515 72.2
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 3.3e-210 735.3 537 71.5
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 3.3e-210 735.3 535 71.4
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 5.6e-210 734.6 529 71.6
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 3.1e-208 728.8 515 71.8
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 5.2e-208 728.0 554 70.0
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 6.8e-208 727.6 519 73.4
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 5.8e-207 724.5 539 70.3
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 1.3e-206 723.4 479 74.3
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 2.9e-206 722.2 525 71.6
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 1.6e-204 716.5 539 68.8
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 1.7e-203 713.0 476 73.9
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 6.6e-203 711.1 462 74.9
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 1.1e-202 710.3 550 66.9
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 1.1e-202 710.3 460 76.1
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 1.5e-202 709.9 466 76.0
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 3.3e-202 708.8 523 70.0
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 4.3e-202 708.4 528 68.4
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 9.5e-202 707.2 538 66.5
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 1.2e-201 706.8 508 73.2
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 1.2e-201 706.8 535 69.7
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 2.1e-201 706.1 511 69.7
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 4.7e-201 704.9 473 73.8
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 4.7e-201 704.9 513 69.6
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 4.0e-200 701.8 493 72.6
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 1.2e-199 700.3 459 75.6
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 5.8e-199 698.0 538 67.3
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 2.2e-198 696.0 521 68.7
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 1.4e-197 693.3 545 68.1
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 1.9e-197 693.0 446 76.7
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 3.2e-197 692.2 470 71.7
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 1.6e-196 689.9 440 77.0
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 4.6e-196 688.3 534 65.0
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 6.0e-196 688.0 546 67.0
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 7.8e-196 687.6 539 66.2
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 1.7e-195 686.4 501 69.3
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 3.0e-195 685.6 475 70.7
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 6.6e-195 684.5 543 65.7
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 6.6e-195 684.5 546 66.7
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 2.5e-194 682.6 478 69.0
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 3.6e-193 678.7 536 65.9
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 1.4e-192 676.8 470 70.0
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 1.8e-192 676.4 491 68.0
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 2.3e-192 676.0 542 64.0
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 2.3e-192 676.0 481 68.6
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 4.0e-192 675.2 533 65.5
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.2e-191 673.7 519 69.4
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 1.5e-191 673.3 520 65.2
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 3.4e-191 672.2 472 69.7
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 7.6e-191 671.0 552 65.4
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 1.6e-188 663.3 572 62.6
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 8.6e-187 657.5 474 68.1
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 1.1e-186 657.1 459 71.9
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 1.2e-180 637.1 458 68.3
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 3.5e-180 635.6 454 68.7
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 7.8e-180 634.4 444 71.2
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 3.9e-179 632.1 506 64.6
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 1.1e-178 630.6 541 61.6
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 8.4e-174 614.4 478 64.4
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 1.3e-171 607.1 547 61.6
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 2.4e-165 586.3 540 57.6
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 1.8e-163 580.1 514 58.2
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 2.1e-156 556.6 488 60.9
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 3.7e-153 545.8 474 62.7
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 1.0e-150 537.7 373 71.8
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 2.2e-150 536.6 537 56.8
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 3.0e-147 526.2 373 67.6
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 7.4e-146 521.5 480 54.0
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 1.3e-145 520.8 434 63.1
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.6e-140 503.8 368 72.0
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 5.7e-130 468.8 546 46.3
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 6.3e-129 465.3 486 48.8
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 7.7e-127 458.4 518 45.6
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 1.3e-126 457.6 455 49.7
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.2e-126 456.8 381 66.7
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 1.2e-119 434.5 475 46.5
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 5.7e-114 415.6 439 46.7
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 1.3e-73 281.6 465 34.0
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 1.1e-67 261.9 425 34.6
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 1.3e-57 228.4 385 41.8
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 3.5e-55 220.3 134 78.4
Glyma.14G020800 Glycine max HOM05D006019 ORTHO05D007900 1.3e-54 218.4 137 78.1
Oeu026380.1 Olea europaea HOM05D006019 ORTHO05D007900 8.7e-46 189.1 137 70.8
TAR720G0004 Trochodendron aralioides HOM05D006019 ORTHO05D007900 7.4e-45 186.0 107 89.7
HPP92_015779 Vanilla planifolia HOM05D006019 ORTHO05D007900 2.6e-42 177.6 244 45.9
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 1.1e-35 155.6 480 26.0
Glyma.14G020666 Glycine max HOM05D006019 ORTHO05D007900 3.6e-31 140.6 92 75.0
VMungo0647G0792 Vigna mungo HOM05D006019 ORTHO05D007900 1.0e-30 139.0 94 77.7
BolC9t57451H Brassica oleracea HOM05D006019 ORTHO05D007900 3.8e-25 120.6 195 39.0
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla HOM05D006019 ORTHO05D007900 5.0e-25 120.2 114 60.5
C09p45770 Brassica napus HOM05D006019 ORTHO05D007900 7.2e-24 116.3 220 35.5
BraA10t43342Z Brassica rapa HOM05D006019 ORTHO05D007900 1.6e-23 115.2 208 36.5
CDE04G2936 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 4.7e-23 113.6 68 77.9
C09p45760 Brassica napus HOM05D006019 ORTHO05D007900 1.1e-19 102.4 120 51.7
BcaC04g20257 Brassica carinata HOM05D006019 ORTHO05D007900 3.9e-14 84.0 80 57.5
Ca_29171_v3 Cicer arietinum L. HOM05D006019 ORTHO05D003051 5.7e-13 80.1 409 22.5
unitig_22.g6169 Utricularia gibba HOM05D006019 ORTHO05D007900 2.2e-09 68.2 51 64.7
BolC9t57452H Brassica oleracea HOM05D006019 ORTHO05D000049 4.7e-07 60.5 61 55.7


User provided reference genes

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