Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1912 Trochodendron aralioides HOM05D005871 ORTHO05D003654 2.4e-78 295.8 198 100.0
TAR626G0615 Trochodendron aralioides HOM05D005871 ORTHO05D003654 6.3e-26 121.7 196 48.0
Nn1g07488 Nelumbo nucifera HOM05D005871 ORTHO05D003654 8.2e-26 121.3 190 48.4
TAR629G2179 Trochodendron aralioides HOM05D005871 ORTHO05D003654 6.1e-21 105.1 145 53.8
Haze_09808 Corylus avellana HOM05D005871 ORTHO05D003654 5.2e-20 102.1 196 48.0
Cfa020208 Carpinus fangiana HOM05D005871 ORTHO05D003654 1.3e-18 97.4 196 51.5
CiPaw.12G137100 Carya illinoinensis HOM05D005871 ORTHO05D003654 1.2e-13 80.9 211 44.1
QL08p004709 Quercus lobata HOM05D005871 ORTHO05D003654 1.2e-13 80.9 225 47.1
Nn1g03208 Nelumbo nucifera HOM05D005871 ORTHO05D003654 2.1e-13 80.1 204 37.3
CiPaw.11G202600 Carya illinoinensis HOM05D005871 ORTHO05D003654 6.1e-13 78.6 195 46.7
TPR.G35473 Trifolium pratense HOM05D005871 ORTHO05D003654 8.0e-13 78.2 188 44.1
CiPaw.03G281200 Carya illinoinensis HOM05D005871 ORTHO05D003654 3.4e-11 72.8 192 43.8
Thecc.07G015800 Theobroma cacao HOM05D005871 ORTHO05D003654 4.4e-11 72.4 239 34.7
VMungo0540G2170 Vigna mungo HOM05D005871 ORTHO05D003654 7.5e-11 71.6 238 42.0
Phvul.006G056300 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 9.8e-11 71.2 228 35.1
Dinv26612 Davidia involucrata HOM05D008806 ORTHO05D003654 1.3e-10 70.9 139 51.8
Glyma.18G078200 Glycine max HOM05D005871 ORTHO05D003654 2.8e-10 69.7 246 33.3
Prupe.3G198500 Prunus persica HOM05D008806 ORTHO05D003654 2.8e-10 69.7 198 46.0
Haze_12634 Corylus avellana HOM05D008806 ORTHO05D003654 3.7e-10 69.3 181 39.8
Lj6g0021132 Lotus japonicus HOM05D005871 ORTHO05D003654 3.7e-10 69.3 229 34.1
MD03G1184900 Malus domestica HOM05D005871 ORTHO05D003654 8.3e-10 68.2 233 37.3
Glyma.02G299500 Glycine max HOM05D005871 ORTHO05D003654 1.1e-09 67.8 232 37.5
QL08p028006 Quercus lobata HOM05D008806 ORTHO05D003654 1.1e-09 67.8 205 44.4
Glyma.08G328600 Glycine max HOM05D005871 ORTHO05D003654 1.8e-09 67.0 244 32.4
Cfa014230 Carpinus fangiana HOM05D008806 ORTHO05D003654 4.1e-09 65.9 182 33.5
VMungo0647G1579 Vigna mungo HOM05D005871 ORTHO05D003654 1.2e-08 64.3 237 31.6
FAN02G3820 Fragaria x ananassa HOM05D005871 ORTHO05D003654 2.7e-08 63.2 189 35.4
Gorai.004G033400 Gossypium raimondii HOM05D005871 ORTHO05D003654 4.5e-08 62.4 205 33.2
Gohir.D08G035400 Gossypium hirsutum HOM05D005871 ORTHO05D003654 7.7e-08 61.6 205 32.2
Gorai.009G449400 Gossypium raimondii HOM05D005871 ORTHO05D003654 7.7e-08 61.6 193 42.5
Phvul.008G278200 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 7.7e-08 61.6 204 34.3
QL06p003419 Quercus lobata HOM05D008806 ORTHO05D003654 7.7e-08 61.6 208 35.6
Duzib170G1062 Durio zibethinus HOM05D005871 ORTHO05D003654 1.0e-07 61.2 208 38.9
Atru.chr2.3672 Acer truncatum HOM05D005871 ORTHO05D003654 3.8e-07 59.3 37 78.4
CANSAT11G0434 Cannabis sativa HOM05D005871 ORTHO05D003654 3.8e-07 59.3 37 78.4
COL.COLO4_09813 Corchorus olitorius HOM05D005871 ORTHO05D003654 3.8e-07 59.3 238 31.5
Glyma.14G014200 Glycine max HOM05D005871 ORTHO05D003654 3.8e-07 59.3 238 34.0
Thecc.01G195400 Theobroma cacao HOM05D008806 ORTHO05D003654 3.8e-07 59.3 190 31.6
Cpa.g.sc12.163 Carica papaya HOM05D005871 ORTHO05D003654 6.6e-07 58.5 37 75.7
Gohir.A08G024900 Gossypium hirsutum HOM05D005871 ORTHO05D003654 6.6e-07 58.5 200 31.0
Gohir.D05G383100 Gossypium hirsutum HOM05D005871 ORTHO05D003654 6.6e-07 58.5 217 38.2
Gorai.009G449600 Gossypium raimondii HOM05D005871 ORTHO05D003654 6.6e-07 58.5 213 38.5
Gohir.D05G383000 Gossypium hirsutum HOM05D005871 ORTHO05D003654 2.5e-06 56.6 209 40.2
Duzib133G1309 Durio zibethinus HOM05D008806 ORTHO05D003654 3.3e-06 56.2 187 32.6
Potri.014G166900 Populus trichocarpa HOM05D008806 ORTHO05D003654 3.3e-06 56.2 198 43.9
Manes.03G140301 Manihot esculenta HOM05D005871 ORTHO05D003654 4.3e-06 55.8 235 40.0
Sed0014857 Sechium edule HOM05D005871 ORTHO05D003654 5.6e-06 55.5 205 37.6
FvH4_6g40700 Fragaria vesca HOM05D008806 ORTHO05D003654 7.3e-06 55.1 190 38.9
Gohir.D05G382900 Gossypium hirsutum HOM05D005871 ORTHO05D003654 7.3e-06 55.1 196 42.9
Lalb_Chr04g0247911 Lupinus albus HOM05D005871 ORTHO05D003654 7.3e-06 55.1 236 30.1
Manes.15G061300 Manihot esculenta HOM05D005871 ORTHO05D003654 9.5e-06 54.7 202 32.2


User provided reference genes

Program Settings