Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1626 Trochodendron aralioides HOM05D000009 ORTHO05D000008 3.6e-108 395.6 318 100.0
Nn5g28060 Nelumbo nucifera HOM05D000009 ORTHO05D000008 4.1e-35 152.9 248 47.2
GSVIVG01013512001 Vitis vinifera HOM05D000009 ORTHO05D000008 1.9e-11 74.3 195 34.4
Thecc.01G405300 Theobroma cacao HOM05D000009 ORTHO05D000008 9.2e-11 72.0 128 37.5
MBI19_g42118_MAGBIO Magnolia biondii HOM05D000009 ORTHO05D000008 2.7e-10 70.5 114 35.1
GSVIVG01005320001 Vitis vinifera HOM05D000009 ORTHO05D000008 3.9e-09 66.6 72 48.6
QL04p013916 Quercus lobata HOM05D000009 ORTHO05D000008 5.1e-09 66.2 197 28.9
Prupe.2G054000 Prunus persica HOM05D000009 ORTHO05D000008 6.6e-09 65.9 199 36.2
GSVIVG01032210001 Vitis vinifera HOM05D000009 ORTHO05D000008 6.6e-09 65.9 195 32.8
RcHm_v2.0_Chr1g0327301 Rosa chinensis HOM05D000009 ORTHO05D000008 8.6e-09 65.5 206 27.2
Duzib114G0195 Durio zibethinus HOM05D000009 ORTHO05D000008 1.9e-08 64.3 195 26.2
FAN11G2944 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.3e-08 63.5 196 26.5
QL04p011320 Quercus lobata HOM05D000009 ORTHO05D000008 3.3e-08 63.5 200 26.0
Rhsim09G0040600 Rhododendron simsii HOM05D000009 ORTHO05D000008 3.3e-08 63.5 198 27.3
GSVIVG01026092001 Vitis vinifera HOM05D000009 ORTHO05D000008 5.6e-08 62.8 67 49.3
Cc00_g00660 Coffea canephora HOM05D000009 ORTHO05D000008 7.3e-08 62.4 228 31.6
Dinv03134 Davidia involucrata HOM05D000009 ORTHO05D000008 7.3e-08 62.4 193 29.0
Ciclev10030529m.g Citrus clementina HOM05D000009 ORTHO05D000008 1.2e-07 61.6 126 31.0
Potri.005G007001 Populus trichocarpa HOM05D000009 ORTHO05D000008 1.2e-07 61.6 223 24.7
Dinv25424 Davidia involucrata HOM05D000009 ORTHO05D000008 2.8e-07 60.5 225 30.2
Duzib114G0584 Durio zibethinus HOM05D000009 ORTHO05D000008 2.8e-07 60.5 195 25.1
Manes.04G165600 Manihot esculenta HOM05D000009 ORTHO05D000008 2.8e-07 60.5 114 34.2
Sabra05G0003000 Salix brachista HOM05D000009 ORTHO05D000008 2.8e-07 60.5 199 26.6
TAR633G1401 Trochodendron aralioides HOM05D000009 ORTHO05D000008 2.8e-07 60.5 69 44.9
vmacro16396 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 2.8e-07 60.5 202 26.2
Haze_25221 Corylus avellana HOM05D000009 ORTHO05D000008 3.6e-07 60.1 43 60.5
TAR369G0441 Trochodendron aralioides HOM05D004806 ORTHO05D005397 3.6e-07 60.1 50 64.0
Dinv43408 Davidia involucrata HOM05D000009 ORTHO05D000008 4.7e-07 59.7 69 47.8
Hma1.2p1_0227F.1_g095790 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 4.7e-07 59.7 196 28.1
QL10p044564 Quercus lobata HOM05D000009 ORTHO05D000008 4.7e-07 59.7 214 32.2
Duzib177G0109 Durio zibethinus HOM05D000009 ORTHO05D010531 6.2e-07 59.3 62 53.2
Phvul.011G193500 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 8.1e-07 58.9 60 46.7
QL04p011351 Quercus lobata HOM05D000009 ORTHO05D000008 8.1e-07 58.9 224 24.1
TAR636G2073 Trochodendron aralioides HOM05D000009 ORTHO05D000008 8.1e-07 58.9 124 31.5
MD07G1045100 Malus domestica HOM05D000009 ORTHO05D000008 1.1e-06 58.5 196 25.0
Phvul.011G198400 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.1e-06 58.5 60 45.0
TAR633G1316 Trochodendron aralioides HOM05D000009 ORTHO05D000008 1.1e-06 58.5 179 27.4
Dinv07433 Davidia involucrata HOM05D000009 ORTHO05D000008 1.4e-06 58.2 184 27.2
Medtr8g038590 Medicago truncatula HOM05D000009 ORTHO05D000008 1.4e-06 58.2 121 33.9
Phvul.011G191600 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.4e-06 58.2 60 45.0
Prupe.6G130000 Prunus persica HOM05D000009 ORTHO05D000008 1.4e-06 58.2 197 26.9
QL04p011804 Quercus lobata HOM05D000009 ORTHO05D000008 1.4e-06 58.2 201 26.9
TAR623G0159 Trochodendron aralioides HOM05D000009 ORTHO05D000008 1.4e-06 58.2 129 30.2
Actinidia32318 Actinidia chinensis HOM05D000009 ORTHO05D000008 1.8e-06 57.8 218 26.1
COL.COLO4_06103 Corchorus olitorius HOM05D000009 ORTHO05D000008 1.8e-06 57.8 49 57.1
Haze_03490 Corylus avellana HOM05D000113 ORTHO05D000008 1.8e-06 57.8 58 55.2
Gohir.A12G177900 Gossypium hirsutum HOM05D000009 ORTHO05D010531 1.8e-06 57.8 62 48.4
Gorai.008G193500 Gossypium raimondii HOM05D000009 ORTHO05D010531 1.8e-06 57.8 62 48.4
Hma1.2p1_1604F.1_g293260 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.8e-06 57.8 34 70.6
Phvul.011G200820 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.8e-06 57.8 66 54.5
TAR623G0059 Trochodendron aralioides HOM05D000009 ORTHO05D000008 1.8e-06 57.8 71 43.7
Manes.07G011300 Manihot esculenta HOM05D000009 ORTHO05D000008 2.3e-06 57.4 128 33.6
Manes.10G128112 Manihot esculenta HOM05D000009 ORTHO05D000008 2.3e-06 57.4 196 26.5
Phvul.011G151300 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.3e-06 57.4 60 60.0
QL05p015193 Quercus lobata HOM05D000009 ORTHO05D000008 2.3e-06 57.4 99 35.4
Thecc.10G003800 Theobroma cacao HOM05D000009 ORTHO05D000008 2.3e-06 57.4 217 32.3
Atru.chr11.2523 Acer truncatum HOM05D000009 ORTHO05D000008 3.1e-06 57.0 120 51.7
Cfa010884 Carpinus fangiana HOM05D000009 ORTHO05D000008 3.1e-06 57.0 64 50.0
Cc00_g32460 Coffea canephora HOM05D000009 ORTHO05D000008 3.1e-06 57.0 192 27.6
Hma1.2p1_0251F.1_g102550 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 3.1e-06 57.0 60 43.3
Hma1.2p1_0251F.1_g102553 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 3.1e-06 57.0 60 43.3
Hma1.2p1_1604F.1_g293230 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 3.1e-06 57.0 34 70.6
Phvul.011G196132 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 3.1e-06 57.0 60 43.3
Potri.001G025400 Populus trichocarpa HOM05D000009 ORTHO05D000008 3.1e-06 57.0 116 32.8
Rhsim06G0066400 Rhododendron simsii HOM05D000009 ORTHO05D000008 3.1e-06 57.0 79 38.0
Thecc.02G299800 Theobroma cacao HOM05D000009 ORTHO05D000008 3.1e-06 57.0 61 50.8
vmacro11084 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 3.1e-06 57.0 214 24.8
GSVIVG01000646001 Vitis vinifera HOM05D000009 ORTHO05D000008 3.1e-06 57.0 196 27.0
Haze_03193 Corylus avellana HOM05D000309 ORTHO05D000008 4.0e-06 56.6 55 56.4
Haze_03194 Corylus avellana HOM05D000009 ORTHO05D000008 4.0e-06 56.6 196 27.0
Rhsim07G0209800 Rhododendron simsii HOM05D000009 ORTHO05D000008 4.0e-06 56.6 203 27.1
GSVIVG01032180001 Vitis vinifera HOM05D000009 ORTHO05D000008 4.0e-06 56.6 72 44.4
CSS0044768 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D010531 5.2e-06 56.2 62 50.0
Haze_03188 Corylus avellana HOM05D000009 ORTHO05D000008 5.2e-06 56.2 59 54.2
Duzib133G0386 Durio zibethinus HOM05D000009 ORTHO05D000008 5.2e-06 56.2 79 43.0
Hma1.2p1_2848F.1_g329350 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 5.2e-06 56.2 227 24.2
Phvul.011G194800 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 5.2e-06 56.2 60 60.0
Phvul.011G202900 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 5.2e-06 56.2 60 63.3
Rhsim07G0066100 Rhododendron simsii HOM05D000009 ORTHO05D000008 5.2e-06 56.2 62 45.2
VMungo1127G0710 Vigna mungo HOM05D000009 ORTHO05D000008 5.2e-06 56.2 36 61.1
Atru.chr11.2450 Acer truncatum HOM05D000005 ORTHO05D000008 6.8e-06 55.8 193 26.4
EL10Ac4g07895 Beta vulgaris HOM05D000009 ORTHO05D000008 6.8e-06 55.8 74 44.6
Haze_27225 Corylus avellana HOM05D000009 ORTHO05D000008 6.8e-06 55.8 46 54.3
Dinv00457 Davidia involucrata HOM05D000009 ORTHO05D000008 6.8e-06 55.8 186 26.3
Dinv03128 Davidia involucrata HOM05D000009 ORTHO05D000008 6.8e-06 55.8 194 28.9
Hma1.2p1_3942F.1_g338030 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 6.8e-06 55.8 196 26.0
QL02p094880 Quercus lobata HOM05D000009 ORTHO05D000008 6.8e-06 55.8 177 25.4
QL04p007202 Quercus lobata HOM05D000009 ORTHO05D000008 6.8e-06 55.8 59 52.5
Rhsim07G0209700 Rhododendron simsii HOM05D000009 ORTHO05D000008 6.8e-06 55.8 60 45.0
Actinidia06254 Actinidia chinensis HOM05D000009 ORTHO05D000008 8.9e-06 55.5 71 45.1
Actinidia31728 Actinidia chinensis HOM05D000009 ORTHO05D010531 8.9e-06 55.5 68 47.1
Haze_03056 Corylus avellana HOM05D000009 ORTHO05D000008 8.9e-06 55.5 59 50.8
QL04p011206 Quercus lobata HOM05D000009 ORTHO05D000008 8.9e-06 55.5 36 55.6
QL04p011415 Quercus lobata HOM05D000009 ORTHO05D000008 8.9e-06 55.5 36 55.6
Rhsim07G0060600 Rhododendron simsii HOM05D000009 ORTHO05D000008 8.9e-06 55.5 40 62.5


User provided reference genes

Program Settings