Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1582 Trochodendron aralioides HOM05D007650 ORTHO05D009695 2.1e-62 242.3 127 100.0
TAR629G0225 Trochodendron aralioides HOM05D007650 ORTHO05D009695 5.1e-21 104.8 63 90.5
TAR629G3449 Trochodendron aralioides HOM05D007650 ORTHO05D009695 9.7e-20 100.5 63 87.3
Haze_05565 Corylus avellana HOM05D007650 ORTHO05D009695 2.6e-17 92.4 60 83.3
CiPaw.09G126000 Carya illinoinensis HOM05D007650 ORTHO05D009695 1.0e-16 90.5 60 80.0
QL05p059009 Quercus lobata HOM05D007650 ORTHO05D009695 1.0e-16 90.5 59 83.1
Manes.17G068200 Manihot esculenta HOM05D007650 ORTHO05D009695 1.3e-16 90.1 60 80.0
Nn3g20684 Nelumbo nucifera HOM05D007650 ORTHO05D009695 3.8e-16 88.6 60 80.0
Sabra11G0064400 Salix brachista HOM05D007650 ORTHO05D009695 5.0e-16 88.2 60 78.3
vmacro09097 Vaccinium macrocarpon HOM05D007650 ORTHO05D009695 6.5e-16 87.8 60 80.0
Cfa000966 Carpinus fangiana HOM05D007650 ORTHO05D009695 8.5e-16 87.4 60 78.3
Hma1.2p1_0137F.1_g062480 Hydrangea macrophylla HOM05D007650 ORTHO05D009695 1.1e-15 87.0 60 76.7
Medtr4g094625 Medicago truncatula HOM05D007650 ORTHO05D009695 1.1e-15 87.0 59 79.7
Rhsim13G0193900 Rhododendron simsii HOM05D007650 ORTHO05D009695 1.1e-15 87.0 60 76.7
RcHm_v2.0_Chr5g0013551 Rosa chinensis HOM05D007650 ORTHO05D009695 1.4e-15 86.7 62 79.0
Actinidia19514 Actinidia chinensis HOM05D007650 ORTHO05D009695 1.9e-15 86.3 60 78.3
Aqoxy4G00120 Aquilegia oxysepala HOM05D007650 ORTHO05D009695 1.9e-15 86.3 60 78.3
Dinv30717 Davidia involucrata HOM05D007650 ORTHO05D009695 3.2e-15 85.5 64 71.9
Ca_18274_v3 Cicer arietinum L. HOM05D007650 ORTHO05D009695 4.2e-15 85.1 59 78.0
Duzib192G0135 Durio zibethinus HOM05D007650 ORTHO05D009695 4.2e-15 85.1 64 70.3
FvH4_3g05890 Fragaria vesca HOM05D007650 ORTHO05D009695 4.2e-15 85.1 54 83.3
FAN11G2937 Fragaria x ananassa HOM05D007650 ORTHO05D009695 4.2e-15 85.1 54 83.3
FAN21G2668 Fragaria x ananassa HOM05D007650 ORTHO05D009695 4.2e-15 85.1 67 73.1
Atru.chr10.1319 Acer truncatum HOM05D007650 ORTHO05D009695 5.5e-15 84.7 60 71.7
arahy.Tifrunner.gnm1.ann1.HZCZ32 Arachis hypogaea HOM05D007650 ORTHO05D009695 5.5e-15 84.7 57 80.7
Potri.011G080900 Populus trichocarpa HOM05D007650 ORTHO05D009695 5.5e-15 84.7 60 76.7
PGR083G1882 Punica granatum HOM05D007650 ORTHO05D009695 5.5e-15 84.7 60 73.3
MELO3C007146.2 Cucumis melo HOM05D007650 ORTHO05D009695 7.2e-15 84.3 52 88.5
arahy.Tifrunner.gnm1.ann1.IH3VZP Arachis hypogaea HOM05D007650 ORTHO05D009695 9.4e-15 84.0 57 80.7
Lsat_1_v5_gn_4_30200 Lactuca sativa HOM05D007650 ORTHO05D009695 9.4e-15 84.0 60 73.3
MD05G1286900 Malus domestica HOM05D007650 ORTHO05D009695 9.4e-15 84.0 60 78.3
Thecc.06G153200 Theobroma cacao HOM05D007650 ORTHO05D009695 9.4e-15 84.0 63 73.0
ClCG01G024480 Citrullus lanatus HOM05D007650 ORTHO05D009695 1.2e-14 83.6 52 88.5
FAN16G2223 Fragaria x ananassa HOM05D007650 ORTHO05D009695 1.2e-14 83.6 54 81.5
Gohir.A06G197300 Gossypium hirsutum HOM05D007650 ORTHO05D009695 1.2e-14 83.6 52 84.6
Gohir.D06G204800 Gossypium hirsutum HOM05D007650 ORTHO05D009695 1.2e-14 83.6 52 84.6
Gorai.010G238900 Gossypium raimondii HOM05D007650 ORTHO05D009695 1.2e-14 83.6 52 84.6
HanXRQChr17g0565021 Helianthus annuus HOM05D007650 ORTHO05D009695 1.2e-14 83.6 59 74.6
Actinidia16723 Actinidia chinensis HOM05D007650 ORTHO05D009695 1.6e-14 83.2 60 75.0
TWI09G0653 Tripterygium wilfordii HOM05D007650 ORTHO05D009695 1.6e-14 83.2 60 76.7
COL.COLO4_38298 Corchorus olitorius HOM05D007650 ORTHO05D009695 2.1e-14 82.8 60 73.3
VMungo0251G1744 Vigna mungo HOM05D007650 ORTHO05D009695 2.1e-14 82.8 59 76.3
Lj1A1185T62 Lonicera japonica HOM05D007650 ORTHO05D009695 2.7e-14 82.4 52 82.7
MBI07_g15281_MAGBIO Magnolia biondii HOM05D007650 ORTHO05D009695 2.7e-14 82.4 52 88.5
EL10As10g23973 Beta vulgaris HOM05D007650 ORTHO05D009695 3.6e-14 82.0 51 84.3
ECA234G0548 Erigeron canadensis HOM05D007650 ORTHO05D009695 4.6e-14 81.6 59 72.9
Eucgr.D00307 Eucalyptus grandis HOM05D007650 ORTHO05D009695 4.6e-14 81.6 50 84.0
Nitab4.5_0001040g0130 Nicotiana tabacum HOM05D007650 ORTHO05D009695 4.6e-14 81.6 59 74.6
CAN.G257.1 Capsicum annuum HOM05D007650 ORTHO05D009695 6.1e-14 81.3 67 68.7
DCAR_005107 Daucus carota HOM05D007650 ORTHO05D009695 6.1e-14 81.3 50 86.0
Psat7g090640 Pisum sativum HOM05D007650 ORTHO05D009695 6.1e-14 81.3 51 84.3
Sc17g0005010 Simmondsia chinensis HOM05D007650 ORTHO05D009695 6.1e-14 81.3 51 84.3
CsaV3_6G051610 Cucumis sativus L. HOM05D007650 ORTHO05D009695 7.9e-14 80.9 48 89.6
Prupe.4G078000 Prunus persica HOM05D007650 ORTHO05D009695 7.9e-14 80.9 59 76.3
CANSAT35G2040 Cannabis sativa HOM05D007650 ORTHO05D009695 1.0e-13 80.5 60 75.0
Cc09_g08850 Coffea canephora HOM05D007650 ORTHO05D009695 1.0e-13 80.5 52 86.5
Phvul.002G194800 Phaseolus vulgaris HOM05D007650 ORTHO05D009695 1.0e-13 80.5 51 84.3
TPR.G4852 Trifolium pratense HOM05D007650 ORTHO05D009695 1.0e-13 80.5 52 80.8
Peaxi162Scf00796g00117 Petunia axillaris HOM05D007650 ORTHO05D009695 1.4e-13 80.1 59 71.2
Glyma.05G129100 Glycine max HOM05D007650 ORTHO05D009695 1.8e-13 79.7 48 87.5
Lj4g0007964 Lotus japonicus HOM05D007650 ORTHO05D009695 1.8e-13 79.7 48 87.5
Nitab4.5_0001655g0220 Nicotiana tabacum HOM05D007650 ORTHO05D009695 1.8e-13 79.7 59 72.9
ATR0585G132 Amborella trichopoda HOM05D007650 ORTHO05D009695 2.3e-13 79.3 56 76.8
Solyc02g070800.2 Solanum lycopersicum HOM05D007650 ORTHO05D009695 2.3e-13 79.3 67 67.2
Sopen02g019890 Solanum pennellii HOM05D007650 ORTHO05D009695 2.3e-13 79.3 67 67.2
Sopen02g019900 Solanum pennellii HOM05D007650 ORTHO05D009695 2.3e-13 79.3 67 67.2
Sopen02g019910 Solanum pennellii HOM05D007650 ORTHO05D009695 2.3e-13 79.3 67 67.2
PGSC0003DMG400008313 Solanum tuberosum HOM05D007650 ORTHO05D009695 2.3e-13 79.3 67 67.2
Lalb_Chr07g0188691 Lupinus albus HOM05D007650 ORTHO05D009695 3.0e-13 79.0 67 62.7
Migut.H01373 Erythranthe guttata HOM05D007650 ORTHO05D009695 3.9e-13 78.6 51 78.4
CDE02G4320 Ceratophyllum demersum HOM05D007650 ORTHO05D009695 5.1e-13 78.2 49 83.7
Zm00001eb296000 Zea mays HOM05D007650 ORTHO05D009695 5.1e-13 78.2 51 78.4
Os05g0565400 Oryza sativa ssp. japonica HOM05D007650 ORTHO05D009695 1.1e-12 77.0 50 76.0
Glyma.08G083700 Glycine max HOM05D007650 ORTHO05D009695 1.5e-12 76.6 48 83.3
Mapoly0064s0064 Marchantia polymorpha HOM05D007650 ORTHO05D009695 1.9e-12 76.3 55 78.2
SalBow7G1373 Salvia bowleyana HOM05D007650 ORTHO05D009695 1.9e-12 76.3 72 59.7
GSVIVG01021423001 Vitis vinifera HOM05D007650 ORTHO05D009695 2.5e-12 75.9 66 66.7
AagrBONN_evm.TU.Sc2ySwM_117.3317 Anthoceros agrestis HOM05D007650 ORTHO05D009695 4.3e-12 75.1 50 76.0
Oeu040111.1 Olea europaea HOM05D007650 ORTHO05D009695 7.4e-12 74.3 61 65.6
unitig_21.g20640 Utricularia gibba HOM05D007650 ORTHO05D009695 7.4e-12 74.3 57 64.9
Hund21519 Selenicereus undatus HOM05D007650 ORTHO05D009695 1.7e-11 73.2 48 79.2
SMO174G0197 Selaginella moellendorffii HOM05D007650 ORTHO05D009695 2.2e-11 72.8 50 76.0
Ah.14g086550 Amaranthus hybridus HOM05D007650 ORTHO05D009695 2.8e-11 72.4 48 81.2
HPP92_024569 Vanilla planifolia HOM05D007650 ORTHO05D009695 9.1e-10 67.4 45 80.0
QL05p059017 Quercus lobata HOM05D007650 ORTHO05D009695 3.2e-07 58.9 59 57.6


User provided reference genes

Program Settings