Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1581 Trochodendron aralioides HOM05D001032 ORTHO05D000907 1.3e-197 693.0 389 100.0
TAR622G0640 Trochodendron aralioides HOM05D001032 ORTHO05D000907 1.9e-95 353.6 420 56.4
CSS0033437 Camellia sinensis var. sinensis HOM05D001032 ORTHO05D000907 9.6e-95 351.3 412 55.8
CSS0024454 Camellia sinensis var. sinensis HOM05D001032 ORTHO05D000907 3.7e-94 349.4 414 55.6
Potri.017G087800 Populus trichocarpa HOM05D001032 ORTHO05D000907 3.7e-94 349.4 411 54.7
TAR371G0049 Trochodendron aralioides HOM05D001032 ORTHO05D000907 1.8e-93 347.1 409 61.4
TWI60G0001 Tripterygium wilfordii HOM05D001032 ORTHO05D000907 2.4e-85 320.1 414 52.2
QL02p084944 Quercus lobata HOM05D001032 ORTHO05D000907 1.5e-84 317.4 413 51.8
Hma1.2p1_0409F.1_g146690 Hydrangea macrophylla HOM05D001032 ORTHO05D000907 5.8e-84 315.5 414 51.9
Thecc.04G087800 Theobroma cacao HOM05D001032 ORTHO05D000907 8.4e-83 311.6 422 49.8
Sabra17G0077600 Salix brachista HOM05D001032 ORTHO05D000907 1.1e-82 311.2 407 49.6
Manes.01G101000 Manihot esculenta HOM05D001032 ORTHO05D000907 1.3e-80 304.3 415 50.4
Cfa007596 Carpinus fangiana HOM05D001032 ORTHO05D000907 3.3e-79 299.7 412 49.3
TWI34G0880 Tripterygium wilfordii HOM05D001032 ORTHO05D000907 3.1e-77 293.1 416 48.1
Duzib147G1435 Durio zibethinus HOM05D001032 ORTHO05D000907 2.0e-76 290.4 425 48.9
Dinv33788 Davidia involucrata HOM05D001032 ORTHO05D000907 3.4e-76 289.7 396 56.1
Aqoxy3G03495 Aquilegia oxysepala HOM05D001032 ORTHO05D000907 5.0e-75 285.8 428 54.2
Duzib187G0246 Durio zibethinus HOM05D001032 ORTHO05D000907 5.0e-75 285.8 410 47.6
TWI34G1937 Tripterygium wilfordii HOM05D001032 ORTHO05D000907 8.5e-75 285.0 412 47.6
Atru.chr8.330 Acer truncatum HOM05D001032 ORTHO05D000907 9.4e-74 281.6 423 52.2
Dinv11501 Davidia involucrata HOM05D001032 ORTHO05D000907 1.6e-73 280.8 381 56.7
Manes.02G049200 Manihot esculenta HOM05D001032 ORTHO05D000907 1.6e-73 280.8 353 56.7
TWI60G0008 Tripterygium wilfordii HOM05D001032 ORTHO05D000907 6.1e-73 278.9 412 48.3
Dinv34098 Davidia involucrata HOM05D000234 ORTHO05D000335 1.4e-72 277.7 388 49.5
Duzib264G0301 Durio zibethinus HOM05D001032 ORTHO05D000907 1.8e-72 277.3 408 48.3
Glyma.13G060600 Glycine max HOM05D001032 ORTHO05D000907 1.8e-72 277.3 421 52.0
MD09G1056000 Malus domestica HOM05D001032 ORTHO05D000907 5.1e-72 275.8 437 47.1
Phvul.004G031900 Phaseolus vulgaris HOM05D001032 ORTHO05D000907 8.8e-72 275.0 412 50.7
Prupe.3G263000 Prunus persica HOM05D001032 ORTHO05D000907 2.0e-71 273.9 431 46.2
CiPaw.04G014500 Carya illinoinensis HOM05D001032 ORTHO05D000907 5.7e-71 272.3 393 48.6
FAN02G3121 Fragaria x ananassa HOM05D001032 ORTHO05D000907 2.8e-70 270.0 427 47.8
FAN05G3411 Fragaria x ananassa HOM05D001032 ORTHO05D000907 1.8e-69 267.3 427 47.5
MBI19_g20763_MAGBIO Magnolia biondii HOM05D001032 ORTHO05D000907 5.3e-69 265.8 440 46.8
Actinidia06105 Actinidia chinensis HOM05D001032 ORTHO05D000907 6.9e-69 265.4 394 51.5
COL.COLO4_12230 Corchorus olitorius HOM05D001032 ORTHO05D000907 9.1e-69 265.0 397 46.3
FAN09G1342 Fragaria x ananassa HOM05D001032 ORTHO05D000907 9.1e-69 265.0 429 46.2
FAN14G1053 Fragaria x ananassa HOM05D001032 ORTHO05D000907 1.2e-68 264.6 425 46.1
Glyma.19G026000 Glycine max HOM05D001032 ORTHO05D000907 1.2e-68 264.6 428 49.8
Ciclev10013796m.g Citrus clementina HOM05D001032 ORTHO05D000907 2.0e-68 263.8 412 48.1
CSS0021709 Camellia sinensis var. sinensis HOM05D001032 ORTHO05D000907 7.7e-68 261.9 442 46.6
Glyma.18G262800 Glycine max HOM05D001032 ORTHO05D000907 7.7e-68 261.9 426 50.9
RcHm_v2.0_Chr2g0167081 Rosa chinensis HOM05D001032 ORTHO05D000907 1.7e-67 260.8 424 45.5
FvH4_6g47880 Fragaria vesca HOM05D001032 ORTHO05D000907 2.2e-67 260.4 425 46.4
Medtr6g012970 Medicago truncatula HOM05D001032 ORTHO05D000907 2.2e-67 260.4 427 44.5
Eucgr.I02007 Eucalyptus grandis HOM05D001032 ORTHO05D000907 3.2e-66 256.5 381 46.7
MD17G1053600 Malus domestica HOM05D001032 ORTHO05D000907 4.2e-66 256.1 438 45.9
CiPaw.06G088900 Carya illinoinensis HOM05D001032 ORTHO05D000907 1.2e-65 254.6 405 47.4
Nitab4.5_0000568g0200 Nicotiana tabacum HOM05D001032 ORTHO05D000907 1.8e-64 250.8 419 44.6
Cc07_g03670 Coffea canephora HOM05D001032 ORTHO05D000907 3.0e-64 250.0 445 45.2
CANSAT64G2687 Cannabis sativa HOM05D001032 ORTHO05D000907 1.5e-63 247.7 437 48.5
CAN.G206.180 Capsicum annuum HOM05D001032 ORTHO05D000907 1.5e-63 247.7 428 46.7
Potri.008G091300 Populus trichocarpa HOM05D001032 ORTHO05D000907 1.3e-62 244.6 412 44.4
Phvul.008G039300 Phaseolus vulgaris HOM05D001032 ORTHO05D000907 4.8e-62 242.7 419 49.4
VMungo0464G1749 Vigna mungo HOM05D001032 ORTHO05D000907 4.8e-62 242.7 411 47.7
Lj2g0022793 Lotus japonicus HOM05D001032 ORTHO05D000907 9.1e-61 238.4 417 43.6
Nitab4.5_0001591g0110 Nicotiana tabacum HOM05D001032 ORTHO05D000907 9.1e-61 238.4 437 44.6
VMungo1383G2552 Vigna mungo HOM05D001032 ORTHO05D000907 9.1e-61 238.4 421 48.5
Psat1g069680 Pisum sativum HOM05D001032 ORTHO05D000907 7.7e-60 235.3 427 41.2
DCAR_025387 Daucus carota HOM05D001032 ORTHO05D000907 2.9e-59 233.4 426 42.7
Actinidia17567 Actinidia chinensis HOM05D001032 ORTHO05D000907 5.5e-58 229.2 364 45.6
Actinidia26237 Actinidia chinensis HOM05D001032 ORTHO05D000907 2.3e-56 223.8 381 47.0
GSVIVG01011465001 Vitis vinifera HOM05D001032 ORTHO05D000907 6.7e-56 222.2 407 43.0
CsaV3_5G038270 Cucumis sativus L. HOM05D001032 ORTHO05D000907 4.4e-55 219.5 424 42.9
Sopen02g033000 Solanum pennellii HOM05D001032 ORTHO05D000907 2.2e-54 217.2 421 43.7
PGR083G0634 Punica granatum HOM05D001032 ORTHO05D000907 1.1e-53 214.9 424 45.3
PGSC0003DMG400001343 Solanum tuberosum HOM05D001032 ORTHO05D000907 2.4e-53 213.8 429 43.4
TPR.G26211 Trifolium pratense HOM05D001032 ORTHO05D000907 2.4e-53 213.8 459 38.3
CiPaw.03G021800 Carya illinoinensis HOM05D001032 ORTHO05D000907 3.1e-53 213.4 412 40.0
MELO3C022010.2 Cucumis melo HOM05D001032 ORTHO05D000907 3.1e-53 213.4 429 42.2
Rhsim08G0072400 Rhododendron simsii HOM05D001032 ORTHO05D000907 3.1e-53 213.4 430 41.6
Cpa.g.sc14.126 Carica papaya HOM05D001032 ORTHO05D000907 5.3e-53 212.6 426 44.1
Haze_14495 Corylus avellana HOM05D001032 ORTHO05D000907 2.0e-52 210.7 295 49.5
ClCG09G017960 Citrullus lanatus HOM05D001032 ORTHO05D000907 2.6e-52 210.3 423 40.9
DCAR_011075 Daucus carota HOM05D001032 ORTHO05D000907 4.5e-52 209.5 423 40.9
HanXRQChr14g0448601 Helianthus annuus HOM05D001032 ORTHO05D000907 8.5e-51 205.3 423 39.2
ECA238G3660 Erigeron canadensis HOM05D001032 ORTHO05D000907 1.1e-50 204.9 425 40.5
CSS0049819 Camellia sinensis var. sinensis HOM05D001032 ORTHO05D000907 1.5e-50 204.5 434 41.7
vmacro18169 Vaccinium macrocarpon HOM05D001032 ORTHO05D000907 3.2e-50 203.4 433 39.7
Lsat_1_v5_gn_2_89300 Lactuca sativa HOM05D001032 ORTHO05D000907 4.2e-50 203.0 415 39.0
Thecc.02G339300 Theobroma cacao HOM05D001032 ORTHO05D000907 7.2e-50 202.2 422 42.7
Nitab4.5_0003347g0110 Nicotiana tabacum HOM05D001032 ORTHO05D000907 2.7e-49 200.3 395 41.0
PSO017G3431 Papaver somniferum HOM05D001032 ORTHO05D000907 6.1e-49 199.1 467 41.8
CSS0005931 Camellia sinensis var. sinensis HOM05D001032 ORTHO05D000907 1.4e-48 198.0 415 41.7
SalBow1G6847 Salvia bowleyana HOM05D001032 ORTHO05D000907 1.4e-48 198.0 421 39.9
PGSC0003DMG400025151 Solanum tuberosum HOM05D001032 ORTHO05D000907 3.0e-48 196.8 341 49.6
Duzib251G0553 Durio zibethinus HOM05D001032 ORTHO05D000907 4.4e-47 193.0 420 41.2
Manes.05G106400 Manihot esculenta HOM05D001032 ORTHO05D000907 7.5e-47 192.2 415 42.4
Peaxi162Scf00166g00107 Petunia axillaris HOM05D001032 ORTHO05D000907 1.7e-46 191.0 422 39.8
Sed0014580 Sechium edule HOM05D001032 ORTHO05D000907 2.2e-46 190.7 421 39.0
Solyc02g088310.1 Solanum lycopersicum HOM05D001032 ORTHO05D000907 4.8e-46 189.5 344 46.2
Actinidia19931 Actinidia chinensis HOM05D001032 ORTHO05D000907 6.3e-46 189.1 415 38.3
Oeu020664.1 Olea europaea HOM05D001032 ORTHO05D000907 1.1e-45 188.3 420 40.0
CANSAT64G1774 Cannabis sativa HOM05D001032 ORTHO05D000907 1.4e-45 188.0 445 39.1
HanXRQChr07g0199641 Helianthus annuus HOM05D001032 ORTHO05D000907 3.1e-45 186.8 347 38.9
arahy.Tifrunner.gnm1.ann1.T9WCKL Arachis hypogaea HOM05D001032 ORTHO05D000907 9.1e-45 185.3 409 39.6
Atru.chr11.1717 Acer truncatum HOM05D001032 ORTHO05D000907 1.7e-43 181.0 407 40.0
Peaxi162Scf00629g00021 Petunia axillaris HOM05D001032 ORTHO05D000907 2.2e-43 180.6 471 35.5
PGR004G1047 Punica granatum HOM05D001032 ORTHO05D000907 1.1e-42 178.3 407 37.8
Gohir.A09G013000 Gossypium hirsutum HOM05D001032 ORTHO05D000907 7.2e-42 175.6 394 40.6
Lsat_1_v5_gn_8_49140 Lactuca sativa HOM05D001032 ORTHO05D000907 7.2e-42 175.6 401 38.2
Nitab4.5_0000212g0120 Nicotiana tabacum HOM05D001032 ORTHO05D000907 2.7e-41 173.7 426 39.9
Gorai.006G013600 Gossypium raimondii HOM05D001032 ORTHO05D000907 8.0e-41 172.2 412 41.5
PSO063G0187 Papaver somniferum HOM05D001032 ORTHO05D000907 1.8e-40 171.0 445 38.4
Gohir.D09G011600 Gossypium hirsutum HOM05D001032 ORTHO05D000907 3.0e-40 170.2 412 41.5
Gorai.008G178900 Gossypium raimondii HOM05D001032 ORTHO05D000907 3.4e-39 166.8 402 38.3
PSO063G2729 Papaver somniferum HOM05D001032 ORTHO05D000907 1.3e-38 164.9 452 36.3
Lsat_1_v5_gn_4_169860 Lactuca sativa HOM05D001032 ORTHO05D000907 1.7e-38 164.5 326 38.3
Gohir.A12G163100 Gossypium hirsutum HOM05D001032 ORTHO05D000907 2.8e-38 163.7 379 39.1
ECA232G1090 Erigeron canadensis HOM05D001032 ORTHO05D000907 3.7e-38 163.3 413 37.8
Gohir.D12G166150 Gossypium hirsutum HOM05D001032 ORTHO05D000907 3.7e-38 163.3 399 38.3
ECA233G1126 Erigeron canadensis HOM05D001032 ORTHO05D000907 5.0e-35 152.9 401 35.4
Haze_11956 Corylus avellana HOM05D001032 ORTHO05D000907 8.6e-35 152.1 307 43.0
TWI14G1310 Tripterygium wilfordii HOM05D001032 ORTHO05D000907 8.6e-35 152.1 187 52.4
Oeu062095.1 Olea europaea HOM05D001032 ORTHO05D000907 3.3e-34 150.2 408 35.5
CAN.G398.3 Capsicum annuum HOM05D001032 ORTHO05D000907 4.3e-34 149.8 309 43.0
TPR.G25557 Trifolium pratense HOM05D001032 ORTHO05D000907 9.5e-34 148.7 346 39.0
Medtr4g082345 Medicago truncatula HOM05D001032 ORTHO05D000907 4.4e-31 139.8 330 37.6
HanXRQChr12g0362001 Helianthus annuus HOM05D001032 ORTHO05D000907 9.8e-31 138.7 398 37.2
Oeu035934.1 Olea europaea HOM05D001032 ORTHO05D000907 9.8e-31 138.7 416 33.7
HPP92_018453 Vanilla planifolia HOM05D001032 ORTHO05D000907 9.8e-31 138.7 406 34.5
Psat7g135600 Pisum sativum HOM05D001032 ORTHO05D000907 1.3e-30 138.3 334 38.0
HanXRQChr09g0264301 Helianthus annuus HOM05D001032 ORTHO05D000907 2.9e-30 137.1 437 32.5
HanXRQChr12g0361831 Helianthus annuus HOM05D001032 ORTHO05D000907 3.7e-30 136.7 315 40.6
Solyc02g067020.1 Solanum lycopersicum HOM05D001032 ORTHO05D000907 1.1e-29 135.2 282 42.2
Sopen02g016210 Solanum pennellii HOM05D001032 ORTHO05D000907 3.2e-29 133.7 287 39.7
Ca_23886_v3 Cicer arietinum L. HOM05D001032 ORTHO05D000907 5.4e-29 132.9 324 37.0
TPR.G34062 Trifolium pratense HOM05D001032 ORTHO05D000907 3.5e-28 130.2 333 36.9
Glyma.20G031000 Glycine max HOM05D001032 ORTHO05D000907 5.9e-28 129.4 330 35.5
Lj4g0001839 Lotus japonicus HOM05D001032 ORTHO05D000907 2.3e-27 127.5 324 38.6
QL03p069808 Quercus lobata HOM05D001032 ORTHO05D000907 8.6e-27 125.6 277 39.0
Hma1.2p1_0448F.1_g154810 Hydrangea macrophylla HOM05D001032 ORTHO05D228326 1.0e-24 118.6 190 47.9
Hma1.2p1_0448F.1_g154815 Hydrangea macrophylla HOM05D001032 ORTHO05D228281 1.0e-24 118.6 190 47.9
VMungo0251G2347 Vigna mungo HOM05D001032 ORTHO05D000907 1.2e-23 115.2 334 35.9
Medtr7g011630 Medicago truncatula HOM05D001032 ORTHO05D000907 2.0e-23 114.4 479 29.4
Zm00001eb030240 Zea mays HOM05D001032 ORTHO05D000907 5.8e-23 112.8 372 35.8
Zm00001eb051660 Zea mays HOM05D001032 ORTHO05D000907 3.7e-22 110.2 374 32.1
Phvul.002G168900 Phaseolus vulgaris HOM05D001032 ORTHO05D000907 3.2e-21 107.1 345 34.2
Ciclev10033847m.g Citrus clementina HOM05D001032 ORTHO05D000907 3.5e-20 103.6 241 39.4
Lj4P114T24 Lonicera japonica HOM05D001032 ORTHO05D000907 1.9e-18 97.8 107 57.9
Cfa008927 Carpinus fangiana HOM05D001032 ORTHO05D000907 1.6e-17 94.7 274 36.9
COL.COLO4_27970 Corchorus olitorius HOM05D001032 ORTHO05D000907 1.6e-17 94.7 208 40.4
ATR0730G089 Amborella trichopoda HOM05D001032 ORTHO05D000907 8.1e-17 92.4 343 30.9
Os12g0582900 Oryza sativa ssp. japonica HOM05D001032 ORTHO05D000907 2.9e-14 84.0 334 30.2
PSO478G1450 Papaver somniferum HOM05D001032 ORTHO05D000907 3.7e-14 83.6 201 36.3
HanXRQChr12g0361881 Helianthus annuus HOM05D001032 ORTHO05D000907 1.9e-13 81.3 164 42.7
EL10Ac4g10382 Beta vulgaris HOM05D001032 ORTHO05D000907 2.6e-07 60.8 47 68.1
Mapoly0038s0075 Marchantia polymorpha HOM05D001032 ORTHO05D000907 7.6e-07 59.3 50 68.0
Sed0012911 Sechium edule HOM05D001032 ORTHO05D000907 1.3e-06 58.5 45 73.3
SMO147G0303 Selaginella moellendorffii HOM05D001032 ORTHO05D000907 1.3e-06 58.5 52 61.5
AUR62040909 Chenopodium quinoa HOM05D001032 ORTHO05D000907 1.7e-06 58.2 47 63.8
Migut.J01881 Erythranthe guttata HOM05D001032 ORTHO05D000907 2.9e-06 57.4 238 28.6
PGSC0003DMG400008352 Solanum tuberosum HOM05D001032 ORTHO05D000907 3.7e-06 57.0 240 29.2
GSVIVG01033416001 Vitis vinifera HOM05D001032 ORTHO05D000907 3.7e-06 57.0 232 28.4
Nitab4.5_0010504g0010 Nicotiana tabacum HOM05D001032 ORTHO05D000907 4.9e-06 56.6 47 68.1
Peaxi162Scf00349g00034 Petunia axillaris HOM05D001032 ORTHO05D000907 6.4e-06 56.2 47 66.0
Cc01_g00840 Coffea canephora HOM05D001032 ORTHO05D000907 8.4e-06 55.8 47 66.0
Medtr7g085810 Medicago truncatula HOM05D001032 ORTHO05D000907 8.4e-06 55.8 240 30.4
Sopen10g029240 Solanum pennellii HOM05D001032 ORTHO05D000907 8.4e-06 55.8 237 27.0


User provided reference genes

Program Settings