Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 5.3e-262 907.1 452 100.0
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 2.8e-231 805.1 447 88.1
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 3.1e-230 801.6 452 87.6
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 1.4e-222 776.2 448 83.9
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 3.1e-222 775.0 448 85.0
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 3.1e-222 775.0 448 85.0
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 4.1e-222 774.6 451 85.8
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 4.1e-222 774.6 448 84.4
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 3.8e-220 768.1 453 83.4
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 1.5e-219 766.1 448 84.6
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 1.9e-219 765.8 450 83.1
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 2.5e-219 765.4 456 84.2
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 3.2e-219 765.0 477 79.5
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 2.1e-218 762.3 453 82.6
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 1.8e-217 759.2 453 82.6
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 2.3e-217 758.8 453 82.6
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 4.0e-217 758.1 448 82.8
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 4.0e-217 758.1 446 82.7
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 5.2e-217 757.7 451 82.3
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 1.2e-216 756.5 455 82.2
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 1.2e-216 756.5 450 82.2
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 1.5e-216 756.1 452 83.4
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 5.7e-216 754.2 450 81.1
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 7.5e-216 753.8 450 82.2
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 2.2e-215 752.3 483 77.0
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 2.8e-215 751.9 457 81.0
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 4.8e-215 751.1 452 80.8
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 1.1e-214 750.0 452 80.3
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 1.4e-214 749.6 453 80.8
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 2.4e-214 748.8 448 81.9
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 3.1e-214 748.4 446 80.9
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 7.0e-214 747.3 452 81.2
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 7.0e-214 747.3 458 79.3
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 1.2e-213 746.5 417 87.5
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 2.0e-213 745.7 437 82.6
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 2.0e-213 745.7 449 81.5
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 3.5e-213 745.0 448 81.7
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 3.5e-213 745.0 446 82.1
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 1.7e-212 742.7 450 79.8
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 1.7e-212 742.7 476 78.8
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 2.9e-212 741.9 450 81.1
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 5.0e-212 741.1 451 80.3
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 8.6e-212 740.3 458 78.4
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 8.6e-212 740.3 457 79.2
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 8.6e-212 740.3 450 80.9
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 1.1e-211 740.0 453 79.2
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 1.1e-211 740.0 458 78.8
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 1.9e-211 739.2 456 79.2
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 1.9e-211 739.2 450 80.4
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 4.2e-211 738.0 452 78.5
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 7.2e-211 737.3 458 77.7
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 9.5e-211 736.9 450 80.2
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 1.2e-210 736.5 453 80.6
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 1.6e-210 736.1 447 77.2
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 2.1e-210 735.7 448 77.2
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 4.7e-210 734.6 448 77.2
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 1.2e-208 729.9 448 81.5
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 3.4e-208 728.4 448 80.8
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 7.5e-208 727.2 452 77.9
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 1.7e-207 726.1 450 77.6
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 3.7e-207 724.9 461 76.1
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 3.7e-207 724.9 457 76.8
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 3.7e-207 724.9 446 78.5
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 4.9e-207 724.5 430 83.0
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 6.3e-207 724.2 436 79.4
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 1.1e-206 723.4 450 76.4
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 3.1e-206 721.8 456 76.5
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 7.8e-205 717.2 467 73.4
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 1.3e-204 716.5 459 77.1
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 1.7e-204 716.1 448 75.9
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 2.9e-204 715.3 448 75.4
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 5.0e-204 714.5 469 75.1
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 6.6e-204 714.1 448 75.2
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 1.5e-203 713.0 448 76.3
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 1.5e-203 713.0 459 74.7
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 1.9e-203 712.6 448 76.6
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 1.2e-202 709.9 448 77.5
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 6.1e-202 707.6 448 75.4
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 1.0e-201 706.8 452 79.0
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 1.4e-201 706.4 457 75.7
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 6.8e-201 704.1 454 76.7
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 3.4e-200 701.8 468 72.0
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 3.4e-200 701.8 446 75.6
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 1.3e-199 699.9 477 70.9
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 1.3e-199 699.9 454 76.4
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 1.8e-198 696.0 447 75.8
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 5.4e-198 694.5 499 73.3
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 5.6e-195 684.5 460 71.7
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 9.5e-195 683.7 455 75.6
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 1.6e-194 682.9 481 74.2
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 8.9e-193 677.2 463 73.9
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 1.6e-189 666.4 406 81.5
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 6.0e-189 664.5 412 78.9
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 3.0e-188 662.1 484 68.2
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 6.6e-188 661.0 447 74.0
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 3.1e-185 652.1 388 79.4
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 5.8e-184 647.9 412 74.5
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 2.2e-183 646.0 411 77.1
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 7.3e-179 630.9 446 71.3
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 7.3e-179 630.9 467 69.6
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 1.2e-176 623.6 378 81.5
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 3.4e-176 622.1 457 67.2
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 3.4e-176 622.1 448 70.3
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 2.4e-166 589.3 430 65.8
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 1.5e-163 580.1 442 62.4
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 5.3e-161 571.6 430 62.8
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 1.3e-159 567.0 322 85.7
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 6.7e-156 554.7 426 64.1
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 2.7e-149 532.7 427 58.8
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 1.3e-140 503.8 454 60.6
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 3.1e-137 492.7 279 83.5
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 4.2e-118 429.1 436 47.2
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 2.2e-114 416.8 320 71.2
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 1.3e-106 391.0 440 47.0
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 8.0e-101 371.7 315 61.9
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 1.0e-100 371.3 367 55.6
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 2.3e-92 343.6 182 90.7
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 1.5e-86 324.3 478 39.1
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 2.7e-64 250.4 188 69.1
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 3.6e-61 240.0 338 42.9
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 8.4e-58 228.8 373 40.8
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 5.1e-55 219.5 108 91.7
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 1.3e-45 188.3 124 76.6
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 8.1e-45 185.7 124 79.0
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 3.1e-44 183.7 390 34.6
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 3.0e-39 167.2 137 64.2
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 3.0e-31 140.6 83 73.5
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 3.0e-31 140.6 100 68.0
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 9.0e-28 129.0 127 51.2
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 5.1e-23 113.2 83 66.3
A10p10750 Brassica napus HOM05D005577 ORTHO05D006941 6.7e-23 112.8 67 71.6
MD16G1122100 Malus domestica HOM05D005577 ORTHO05D006941 6.7e-23 112.8 74 71.6
MCO16G135 Micromonas commoda HOM05D005577 ORTHO05D267611 2.2e-21 107.8 192 32.3
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 2.4e-20 104.4 104 54.8
RcHm_v2.0_Chr4g0417241 Rosa chinensis HOM05D005577 ORTHO05D006941 9.0e-20 102.4 70 70.0
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 4.5e-19 100.1 73 65.8
Duzib268G0110 Durio zibethinus HOM05D005577 ORTHO05D006941 1.4e-17 95.1 101 53.5
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 3.0e-15 87.4 56 80.4
VMungo0720G2142 Vigna mungo HOM05D008589 ORTHO05D010715 7.4e-06 56.2 68 47.1


User provided reference genes

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