Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1516 Trochodendron aralioides HOM05D007670 ORTHO05D009646 4.7e-161 571.2 307 100.0
Thecc.03G116000 Theobroma cacao HOM05D007670 ORTHO05D009646 1.4e-112 410.2 300 73.3
Actinidia08035 Actinidia chinensis HOM05D007670 ORTHO05D009646 2.0e-111 406.4 312 71.5
GSVIVG01007632001 Vitis vinifera HOM05D007670 ORTHO05D009646 4.7e-105 385.2 260 75.8
Aqoxy3G01244 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 6.8e-104 381.3 303 70.3
Cfa019228 Carpinus fangiana HOM05D007670 ORTHO05D009646 1.5e-103 380.2 310 69.4
COL.COLO4_33501 Corchorus olitorius HOM05D007670 ORTHO05D009646 1.4e-101 373.6 304 66.8
TWI23G1319 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 7.8e-100 367.9 298 66.8
TWI39G0169 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 7.3e-98 361.3 298 64.8
Potri.015G084300 Populus trichocarpa HOM05D007670 ORTHO05D009646 1.6e-97 360.1 254 72.8
Lj5C130G15 Lonicera japonica HOM05D007670 ORTHO05D009646 3.6e-97 359.0 303 64.0
Gohir.A03G074800 Gossypium hirsutum HOM05D007670 ORTHO05D009646 4.8e-97 358.6 306 64.1
Cc04_g11380 Coffea canephora HOM05D007670 ORTHO05D009646 2.4e-96 356.3 304 63.5
Glyma.05G042100 Glycine max HOM05D007670 ORTHO05D009646 5.8e-95 351.7 300 64.7
PGR044G2723 Punica granatum HOM05D007670 ORTHO05D009646 5.8e-95 351.7 301 65.1
DCAR_007451 Daucus carota HOM05D007670 ORTHO05D009646 9.9e-95 350.9 301 64.5
Eucgr.K02784 Eucalyptus grandis HOM05D007670 ORTHO05D009646 8.4e-94 347.8 252 69.4
Ciclev10024352m.g Citrus clementina HOM05D007670 ORTHO05D009646 3.2e-93 345.9 301 63.1
FAN08G1903 Fragaria x ananassa HOM05D007670 ORTHO05D009646 4.2e-93 345.5 309 65.7
FAN18G1020 Fragaria x ananassa HOM05D007670 ORTHO05D009646 4.2e-93 345.5 309 63.4
CANSAT80G0945 Cannabis sativa HOM05D007670 ORTHO05D009646 1.2e-92 344.0 302 63.2
FvH4_5g06391 Fragaria vesca HOM05D007670 ORTHO05D009646 1.6e-92 343.6 309 63.1
FAN13G0035 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.7e-91 340.1 309 63.4
FAN04G2873 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.1e-90 337.4 313 62.0
Phvul.003G205800 Phaseolus vulgaris HOM05D007670 ORTHO05D009646 7.4e-90 334.7 300 61.3
VMungo1215G0346 Vigna mungo HOM05D007670 ORTHO05D009646 7.4e-90 334.7 310 60.3
PSO478G3950 Papaver somniferum HOM05D007670 ORTHO05D009646 3.6e-89 332.4 307 61.2
SalBow5G0325 Salvia bowleyana HOM05D007670 ORTHO05D009646 6.2e-89 331.6 303 62.7
SalBow5G5044 Salvia bowleyana HOM05D007670 ORTHO05D009646 6.2e-89 331.6 303 62.7
Sopen03g031210 Solanum pennellii HOM05D007670 ORTHO05D009646 6.2e-89 331.6 300 63.0
Nitab4.5_0008913g0020 Nicotiana tabacum HOM05D007670 ORTHO05D009646 2.4e-88 329.7 302 62.9
Nitab4.5_0002522g0060 Nicotiana tabacum HOM05D007670 ORTHO05D009646 4.0e-88 328.9 303 63.4
arahy.Tifrunner.gnm1.ann1.4HF9FM Arachis hypogaea HOM05D007670 ORTHO05D009646 1.5e-87 327.0 303 60.7
Ca_19420_v3 Cicer arietinum L. HOM05D007670 ORTHO05D009646 2.6e-87 326.2 300 61.3
arahy.Tifrunner.gnm1.ann1.2S9CTF Arachis hypogaea HOM05D007670 ORTHO05D009646 7.6e-87 324.7 303 60.7
ClCG03G003050 Citrullus lanatus HOM05D007670 ORTHO05D009646 2.9e-86 322.8 299 59.9
Psat4g061560 Pisum sativum HOM05D007670 ORTHO05D009646 3.8e-86 322.4 299 60.2
PGSC0003DMG400018192 Solanum tuberosum HOM05D007670 ORTHO05D009646 4.9e-86 322.0 299 62.5
Medtr4g104750 Medicago truncatula HOM05D007670 ORTHO05D009646 5.5e-85 318.5 299 60.9
Lj4g0014046 Lotus japonicus HOM05D007670 ORTHO05D009646 1.6e-84 317.0 301 62.8
Sed0003800 Sechium edule HOM05D007670 ORTHO05D009646 1.6e-84 317.0 301 59.8
Prupe.5G164600 Prunus persica HOM05D007670 ORTHO05D009646 1.3e-83 313.9 205 77.6
ECA246G3610 Erigeron canadensis HOM05D007670 ORTHO05D009646 3.9e-83 312.4 302 57.6
Peaxi162Scf00089g01230 Petunia axillaris HOM05D007670 ORTHO05D009646 3.3e-82 309.3 288 62.5
TPR.G37476 Trifolium pratense HOM05D007670 ORTHO05D009646 3.3e-82 309.3 325 55.4
MELO3C002304.2 Cucumis melo HOM05D007670 ORTHO05D009646 5.6e-82 308.5 307 56.7
MD14G1170500 Malus domestica HOM05D007670 ORTHO05D009646 5.6e-82 308.5 203 75.9
Hma1.2p1_1092F.1_g255930 Hydrangea macrophylla HOM05D007670 ORTHO05D009646 8.1e-81 304.7 216 71.3
Atru.chr9.2593 Acer truncatum HOM05D007670 ORTHO05D009646 1.1e-80 304.3 302 56.3
Migut.O00167 Erythranthe guttata HOM05D007670 ORTHO05D009646 5.3e-80 302.0 203 73.9
ATR0824G010 Amborella trichopoda HOM05D007670 ORTHO05D009646 3.4e-79 299.3 313 56.5
Solyc03g112120.3 Solanum lycopersicum HOM05D007670 ORTHO05D009646 1.0e-78 297.7 285 60.4
RcHm_v2.0_Chr7g0192411 Rosa chinensis HOM05D007670 ORTHO05D009646 2.5e-77 293.1 223 70.9
Lsat_1_v5_gn_5_13921 Lactuca sativa HOM05D007670 ORTHO05D009646 4.2e-77 292.4 210 68.6
Manes.06G111300 Manihot esculenta HOM05D007670 ORTHO05D009646 1.6e-76 290.4 181 77.9
CiPaw.12G031800 Carya illinoinensis HOM05D007670 ORTHO05D009646 2.1e-76 290.0 254 65.4
Gorai.003G106900 Gossypium raimondii HOM05D007670 ORTHO05D009646 2.6e-71 273.1 203 67.0
Gohir.D03G101500 Gossypium hirsutum HOM05D007670 ORTHO05D009646 1.9e-69 266.9 209 64.6
Glyma.17G124700 Glycine max HOM05D007670 ORTHO05D009646 1.0e-62 244.6 222 61.7
HPP92_003438 Vanilla planifolia HOM05D001493 ORTHO05D001681 2.2e-62 243.4 203 61.1
Actinidia24601 Actinidia chinensis HOM05D007670 ORTHO05D009646 6.1e-60 235.3 209 61.7
QL10p006759 Quercus lobata HOM05D007670 ORTHO05D009646 5.7e-58 228.8 254 55.1
Zm00001eb388830 Zea mays HOM05D007670 ORTHO05D009646 7.7e-55 218.4 299 46.2
HPP92_001311 Vanilla planifolia HOM05D007670 ORTHO05D009646 3.6e-52 209.5 214 53.3
SEGI_28887 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 1.4e-51 207.6 204 55.9
HanXRQChr05g0156201 Helianthus annuus HOM05D007670 ORTHO05D009646 5.7e-50 202.2 140 67.9
Os01g0909300 Oryza sativa ssp. japonica HOM05D007670 ORTHO05D009646 8.5e-38 161.8 136 60.3
Zm00001eb143920 Zea mays HOM05D007670 ORTHO05D009646 7.2e-37 158.7 299 37.1
Pp3c11_2120 Physcomitrium patens HOM05D007670 ORTHO05D009646 9.8e-34 148.3 256 36.7
Zm00001eb393770 Zea mays HOM05D007670 ORTHO05D009646 3.7e-33 146.4 134 56.0
Cpa.g.sc159.12 Carica papaya HOM05D007670 ORTHO05D009646 2.0e-31 140.6 302 38.4
Pp3c26_6480 Physcomitrium patens HOM05D007670 ORTHO05D009646 3.2e-29 133.3 235 35.7
Pp3c26_6484 Physcomitrium patens HOM05D007670 ORTHO05D009646 3.2e-29 133.3 235 35.7
Dinv20593 Davidia involucrata HOM05D007670 ORTHO05D009646 6.1e-28 129.0 80 78.8
Pp3c10_12340 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.0e-27 128.3 207 37.7
Pp3c21_7410 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.4e-24 117.9 200 36.0
Mapoly0020s0028 Marchantia polymorpha HOM05D007670 ORTHO05D009646 1.8e-24 117.5 188 40.4
Pp3c18_13530 Physcomitrium patens HOM05D007670 ORTHO05D009646 4.5e-23 112.8 255 32.9
Glyma.17G124800 Glycine max HOM05D007670 ORTHO05D009646 1.9e-21 107.5 80 65.0
Pp3c7_23860 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.0e-19 101.7 260 29.6
SMO118G0556 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 1.2e-15 88.2 210 32.9
Sabra15G0107400 Salix brachista HOM05D007670 ORTHO05D009646 1.7e-14 84.3 58 74.1
Aqoxy3G00774 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 2.3e-14 84.0 126 41.3
SEGI_38678 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 3.0e-14 83.6 80 58.8
MELO3C031542.2 Cucumis melo HOM05D007670 ORTHO05D009646 1.6e-12 77.8 104 49.0
AagrBONN_evm.TU.Sc2ySwM_228.3840 Anthoceros agrestis HOM05D007837 ORTHO05D009965 1.2e-10 71.6 222 26.1
Migut.M01930 Erythranthe guttata HOM05D007837 ORTHO05D009965 7.5e-10 68.9 216 28.2
Gohir.D05G113500 Gossypium hirsutum HOM05D007837 ORTHO05D009965 3.7e-09 66.6 206 29.1
Oeu008970.1 Olea europaea HOM05D007837 ORTHO05D009965 4.9e-09 66.2 228 24.1
Solyc02g069550.1 Solanum lycopersicum HOM05D007837 ORTHO05D009965 1.1e-08 65.1 204 25.5
Sopen02g018680 Solanum pennellii HOM05D007837 ORTHO05D009965 1.1e-08 65.1 204 25.5
Ciclev10017939m.g Citrus clementina HOM05D007837 ORTHO05D009965 1.4e-08 64.7 241 26.6
Gorai.009G117500 Gossypium raimondii HOM05D007837 ORTHO05D009965 1.4e-08 64.7 206 28.6
VMungo1127G0844 Vigna mungo HOM05D007837 ORTHO05D009965 2.4e-08 63.9 163 29.4
Dinv06743 Davidia involucrata HOM05D007837 ORTHO05D009965 3.2e-08 63.5 228 25.4
Gohir.A05G113000 Gossypium hirsutum HOM05D007837 ORTHO05D009965 3.2e-08 63.5 206 28.6
PSO541G2349 Papaver somniferum HOM05D007837 ORTHO05D009965 3.2e-08 63.5 239 26.4
Manes.16G061400 Manihot esculenta HOM05D007837 ORTHO05D009965 4.1e-08 63.2 243 25.1
Cpa.g.sc192.12 Carica papaya HOM05D007837 ORTHO05D009965 5.4e-08 62.8 214 26.6
Lj3g0012849 Lotus japonicus HOM05D007837 ORTHO05D009965 5.4e-08 62.8 275 26.9
CANSAT35G1648 Cannabis sativa HOM05D007837 ORTHO05D009965 7.0e-08 62.4 219 26.5
Psat7g145400 Pisum sativum HOM05D007837 ORTHO05D009965 7.0e-08 62.4 189 26.5
GSVIVG01037969001 Vitis vinifera HOM05D007837 ORTHO05D009965 7.0e-08 62.4 206 26.7
PSO675G4978 Papaver somniferum HOM05D007837 ORTHO05D009965 9.2e-08 62.0 242 26.0
SEGI_16109 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 9.2e-08 62.0 226 26.1
Thecc.06G015600 Theobroma cacao HOM05D007837 ORTHO05D009965 9.2e-08 62.0 216 25.5
COL.COLO4_22875 Corchorus olitorius HOM05D007837 ORTHO05D009965 1.6e-07 61.2 230 25.7
Duzib160G0902 Durio zibethinus HOM05D007837 ORTHO05D009965 1.6e-07 61.2 200 27.0
DCAR_001340 Daucus carota HOM05D007837 ORTHO05D009965 2.7e-07 60.5 194 24.7
Glyma.12G002600 Glycine max HOM05D007837 ORTHO05D009965 2.7e-07 60.5 243 24.7
TWI15G0587 Tripterygium wilfordii HOM05D007837 ORTHO05D009965 2.7e-07 60.5 235 25.1
PGR042G0413 Punica granatum HOM05D007837 ORTHO05D009965 3.5e-07 60.1 247 25.9
Actinidia33640 Actinidia chinensis HOM05D007837 ORTHO05D009965 6.0e-07 59.3 228 24.6
Aqoxy3G03542 Aquilegia oxysepala HOM05D007837 ORTHO05D009965 6.0e-07 59.3 254 23.6
Peaxi162Scf00195g00413 Petunia axillaris HOM05D007837 ORTHO05D009965 6.0e-07 59.3 202 24.3
Potri.011G153800 Populus trichocarpa HOM05D007837 ORTHO05D009965 6.0e-07 59.3 219 25.6
SalBow8G2294 Salvia bowleyana HOM05D007837 ORTHO05D009965 7.8e-07 58.9 203 25.6
SalBow8G2521 Salvia bowleyana HOM05D007837 ORTHO05D009965 7.8e-07 58.9 203 25.6
Atru.chr10.652 Acer truncatum HOM05D007837 ORTHO05D009965 1.3e-06 58.2 272 24.3
Phvul.011G003300 Phaseolus vulgaris HOM05D007837 ORTHO05D009965 1.3e-06 58.2 182 26.4
Nitab4.5_0001219g0090 Nicotiana tabacum HOM05D007837 ORTHO05D009965 1.7e-06 57.8 184 23.9
Cc09_g07320 Coffea canephora HOM05D007837 ORTHO05D009965 2.3e-06 57.4 202 26.7
CsaV3_6G053020 Cucumis sativus L. HOM05D007837 ORTHO05D009965 2.3e-06 57.4 210 23.8
Dinv15942 Davidia involucrata HOM05D007837 ORTHO05D009965 3.0e-06 57.0 216 24.5
CSS0012057 Camellia sinensis var. sinensis HOM05D007837 ORTHO05D009965 3.9e-06 56.6 235 26.0
MELO3C007007.2 Cucumis melo HOM05D007837 ORTHO05D009965 5.0e-06 56.2 209 23.4
MD10G1240200 Malus domestica HOM05D007837 ORTHO05D009965 5.0e-06 56.2 229 24.0
arahy.Tifrunner.gnm1.ann1.FUT705 Arachis hypogaea HOM05D007837 ORTHO05D009965 8.6e-06 55.5 188 24.5
Prupe.4G103700 Prunus persica HOM05D007837 ORTHO05D009965 8.6e-06 55.5 246 25.6


User provided reference genes

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