Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 8.0e-91 337.0 166 100.0
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 5.2e-58 228.0 167 70.7
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 9.3e-47 190.7 164 64.0
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 6.0e-46 188.0 164 64.0
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 5.1e-45 184.9 170 62.4
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 1.3e-40 170.2 174 56.9
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 1.7e-40 169.9 170 59.4
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 6.4e-40 167.9 170 60.6
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 3.2e-39 165.6 173 59.0
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 3.5e-38 162.2 143 64.3
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 1.0e-37 160.6 166 57.2
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 1.0e-37 160.6 178 54.5
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 3.9e-37 158.7 172 57.6
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 8.7e-37 157.5 177 55.9
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 1.1e-36 157.1 177 53.7
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 4.3e-36 155.2 166 56.6
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 8.1e-35 151.0 176 51.1
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 1.4e-34 150.2 168 54.8
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 1.8e-34 149.8 172 55.8
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 1.8e-34 149.8 165 58.8
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 4.0e-34 148.7 174 51.7
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 4.0e-34 148.7 187 52.4
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 5.3e-34 148.3 178 50.6
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 6.9e-34 147.9 173 50.9
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 9.0e-34 147.5 174 55.2
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 1.5e-33 146.7 172 54.1
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 1.5e-33 146.7 172 54.1
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 1.5e-33 146.7 173 50.9
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 1.5e-33 146.7 172 56.4
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 1.5e-33 146.7 175 54.9
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 2.6e-33 146.0 168 54.2
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 3.4e-33 145.6 176 51.7
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 3.4e-33 145.6 168 51.2
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 3.4e-33 145.6 168 51.2
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 3.4e-33 145.6 169 53.3
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 4.5e-33 145.2 170 50.0
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 5.8e-33 144.8 168 55.4
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 7.6e-33 144.4 178 50.6
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 7.6e-33 144.4 178 50.6
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 7.6e-33 144.4 182 50.0
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 1.3e-32 143.7 176 49.4
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 1.3e-32 143.7 170 56.5
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 1.7e-32 143.3 169 50.3
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 6.5e-32 141.4 169 50.9
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 6.5e-32 141.4 176 52.3
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 1.4e-31 140.2 180 49.4
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 1.9e-31 139.8 169 49.7
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 3.2e-31 139.0 170 54.7
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 5.5e-31 138.3 175 49.7
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 7.1e-31 137.9 175 50.3
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 1.2e-30 137.1 167 51.5
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 1.6e-30 136.7 167 51.5
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 1.6e-30 136.7 167 51.5
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.1e-30 136.3 169 51.5
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 2.1e-30 136.3 173 50.3
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 2.7e-30 136.0 173 52.6
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 2.7e-30 136.0 174 48.3
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 3.5e-30 135.6 168 51.2
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 3.5e-30 135.6 169 48.5
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 3.5e-30 135.6 181 48.6
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 6.0e-30 134.8 171 50.9
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 6.0e-30 134.8 171 50.3
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 1.8e-29 133.3 166 48.2
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 1.8e-29 133.3 166 48.2
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 2.3e-29 132.9 104 68.3
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 3.9e-29 132.1 173 49.1
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 3.9e-29 132.1 198 45.5
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 5.1e-29 131.7 171 49.7
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 6.7e-29 131.3 170 48.8
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 6.7e-29 131.3 172 52.3
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 2.5e-28 129.4 179 51.4
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 2.5e-28 129.4 187 47.6
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 2.5e-28 129.4 172 52.9
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 5.7e-28 128.3 176 47.7
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 7.4e-28 127.9 89 73.0
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 9.6e-28 127.5 171 49.7
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 9.6e-28 127.5 171 49.7
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 9.6e-28 127.5 178 50.6
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 1.6e-27 126.7 91 73.6
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 1.6e-27 126.7 173 50.3
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 2.1e-27 126.3 168 48.2
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 6.2e-27 124.8 171 48.5
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 6.2e-27 124.8 166 48.8
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 1.1e-26 124.0 175 48.6
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 9.0e-26 120.9 94 70.2
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 3.4e-25 119.0 125 60.0
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 7.6e-25 117.9 176 48.9
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 1.0e-24 117.5 120 56.7
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 1.3e-24 117.1 177 45.8
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 2.2e-24 116.3 138 50.0
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 5.0e-24 115.2 182 45.1
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 5.0e-24 115.2 162 47.5
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 6.5e-24 114.8 179 46.4
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 5.5e-23 111.7 251 36.3
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 9.3e-23 110.9 140 55.0
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 4.6e-22 108.6 142 47.9
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 1.3e-21 107.1 176 45.5
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 8.7e-21 104.4 139 44.6
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 1.1e-20 104.0 143 48.3
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 1.9e-20 103.2 88 63.6
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 2.5e-20 102.8 93 64.5
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 7.4e-20 101.3 145 44.8
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 2.2e-19 99.8 141 47.5
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 1.3e-16 90.5 150 44.7
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 2.2e-16 89.7 55 80.0
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 8.5e-16 87.8 61 75.4
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 5.5e-15 85.1 70 61.4
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 9.4e-15 84.3 91 53.8
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 3.9e-13 79.0 70 58.6
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 1.5e-12 77.0 65 66.2
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 3.7e-11 72.4 62 59.7
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 1.1e-10 70.9 76 50.0
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 5.3e-10 68.6 45 71.1
Lsat_1_v5_gn_3_43041 Lactuca sativa HOM05D006875 ORTHO05D008416 1.2e-09 67.4 187 35.3
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 3.4e-09 65.9 126 39.7


User provided reference genes

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