Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1471 Trochodendron aralioides HOM05D001391 ORTHO05D005432 1.4e-196 689.5 357 100.0
TAR629G2660 Trochodendron aralioides HOM05D001391 ORTHO05D005432 1.4e-196 689.5 357 100.0
Sabra10G0120500 Salix brachista HOM05D001391 ORTHO05D005432 4.3e-158 561.6 359 78.3
GSVIVG01012214001 Vitis vinifera HOM05D001391 ORTHO05D005432 2.1e-157 559.3 377 75.6
CiPaw.06G092300 Carya illinoinensis HOM05D001391 ORTHO05D005432 6.9e-156 554.3 368 76.1
Manes.01G028100 Manihot esculenta HOM05D001391 ORTHO05D005432 7.6e-155 550.8 347 80.1
Potri.010G158700 Populus trichocarpa HOM05D001391 ORTHO05D005432 7.6e-155 550.8 347 79.3
PSO017G5650 Papaver somniferum HOM05D001391 ORTHO05D005432 1.9e-153 546.2 357 78.4
PSO478G1327 Papaver somniferum HOM05D001391 ORTHO05D005432 1.2e-152 543.5 357 78.2
SGA_v2.0_scaffold16G07780 Striga asiatica HOM05D001391 ORTHO05D005432 1.2e-152 543.5 355 77.7
Sopen05g007170 Solanum pennellii HOM05D001391 ORTHO05D005432 2.7e-152 542.3 355 77.5
Glyma.20G025600 Glycine max HOM05D001391 ORTHO05D005432 3.5e-152 542.0 355 76.6
TWI31G1273 Tripterygium wilfordii HOM05D001391 ORTHO05D005432 6.0e-152 541.2 354 77.7
Lj3C1030G23 Lonicera japonica HOM05D001391 ORTHO05D005432 1.0e-151 540.4 337 80.1
QL03p071791 Quercus lobata HOM05D001391 ORTHO05D005432 2.3e-151 539.3 353 77.3
QL03p072323 Quercus lobata HOM05D001391 ORTHO05D005432 2.3e-151 539.3 353 77.1
Atru.chr11.1633 Acer truncatum HOM05D001391 ORTHO05D005432 3.9e-151 538.5 358 76.3
Sed0003297 Sechium edule HOM05D001391 ORTHO05D005432 3.9e-151 538.5 353 75.1
Prupe.1G286500 Prunus persica HOM05D001391 ORTHO05D005432 1.9e-150 536.2 351 76.9
Lj4g0006249 Lotus japonicus HOM05D001391 ORTHO05D005432 2.5e-150 535.8 351 75.8
MD16G1061600 Malus domestica HOM05D001391 ORTHO05D005432 2.5e-150 535.8 350 76.6
CDE05G0079 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 3.3e-150 535.4 351 77.2
MELO3C011425.2 Cucumis melo HOM05D001391 ORTHO05D005432 2.1e-149 532.7 346 76.6
DCAR_007192 Daucus carota HOM05D001391 ORTHO05D005432 2.8e-149 532.3 360 75.6
QL03p071836 Quercus lobata HOM05D001391 ORTHO05D005432 6.2e-149 531.2 354 76.3
Sed0027135 Sechium edule HOM05D001391 ORTHO05D005432 6.2e-149 531.2 348 75.9
Eucgr.B03154 Eucalyptus grandis HOM05D001391 ORTHO05D005432 1.8e-148 529.6 327 79.8
Ciclev10031905m.g Citrus clementina HOM05D001391 ORTHO05D005432 2.4e-148 529.3 359 74.4
QL03p072348 Quercus lobata HOM05D001391 ORTHO05D005432 5.3e-148 528.1 355 74.9
Duzib248G0196 Durio zibethinus HOM05D001391 ORTHO05D005432 6.9e-148 527.7 334 78.1
CSS0007431 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 1.2e-147 526.9 336 78.6
CSS0028231 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 1.2e-147 526.9 336 78.6
Ca_18800_v3 Cicer arietinum L. HOM05D001391 ORTHO05D005432 1.2e-147 526.9 345 77.4
TAR622G0883 Trochodendron aralioides HOM05D001391 ORTHO05D005432 1.2e-147 526.9 384 74.5
arahy.Tifrunner.gnm1.ann1.52K398 Arachis hypogaea HOM05D001391 ORTHO05D005432 1.5e-147 526.6 351 75.5
Aqoxy3G03632 Aquilegia oxysepala HOM05D001391 ORTHO05D005432 2.0e-147 526.2 358 75.1
arahy.Tifrunner.gnm1.ann1.G55KBL Arachis hypogaea HOM05D001391 ORTHO05D005432 2.0e-147 526.2 328 79.3
THA.LOC104824058 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 2.0e-147 526.2 348 74.7
Cc11_g12040 Coffea canephora HOM05D001391 ORTHO05D005432 2.6e-147 525.8 360 76.1
Lalb_Chr05g0219941 Lupinus albus HOM05D001391 ORTHO05D005432 3.4e-147 525.4 363 74.1
HanXRQChr15g0477081 Helianthus annuus HOM05D001391 ORTHO05D005432 1.7e-146 523.1 353 72.5
Psat7g134560 Pisum sativum HOM05D001391 ORTHO05D005432 2.2e-146 522.7 342 76.6
QL03p071994 Quercus lobata HOM05D001391 ORTHO05D005432 2.2e-146 522.7 354 75.1
MD13G1063100 Malus domestica HOM05D001391 ORTHO05D005432 3.8e-146 521.9 352 75.6
QL03p072246 Quercus lobata HOM05D001391 ORTHO05D005432 4.9e-146 521.5 381 70.9
ECA246G4329 Erigeron canadensis HOM05D001391 ORTHO05D005432 1.4e-145 520.0 353 72.0
Medtr4g083100 Medicago truncatula HOM05D001391 ORTHO05D005432 1.4e-145 520.0 345 75.7
PGR102G1705 Punica granatum HOM05D001391 ORTHO05D005432 3.2e-145 518.8 321 80.1
AL5G13280 Arabidopsis lyrata HOM05D001391 ORTHO05D005432 5.5e-145 518.1 361 72.3
CAN.G616.39 Capsicum annuum HOM05D001391 ORTHO05D005432 5.5e-145 518.1 354 76.0
Thecc.02G331500 Theobroma cacao HOM05D001391 ORTHO05D005432 5.5e-145 518.1 318 80.8
VMungo0251G0716 Vigna mungo HOM05D001391 ORTHO05D005432 7.1e-145 517.7 374 70.9
BcaB07g30667 Brassica carinata HOM05D001391 ORTHO05D005432 9.3e-145 517.3 350 74.3
QL06p022506 Quercus lobata HOM05D001391 ORTHO05D005432 2.1e-144 516.2 356 73.9
A09p24460 Brassica napus HOM05D001391 ORTHO05D005432 4.6e-144 515.0 351 73.8
PGSC0003DMG400028375 Solanum tuberosum HOM05D001391 ORTHO05D005432 4.6e-144 515.0 335 77.9
BraA09t38039Z Brassica rapa HOM05D001391 ORTHO05D005432 6.0e-144 514.6 351 73.8
Actinidia16169 Actinidia chinensis HOM05D001391 ORTHO05D005432 1.0e-143 513.8 320 80.6
FAN07G1596 Fragaria x ananassa HOM05D001391 ORTHO05D005432 1.3e-143 513.5 369 71.0
AT2G03510 Arabidopsis thaliana HOM05D001391 ORTHO05D005432 2.3e-143 512.7 361 71.5
Dinv34072 Davidia involucrata HOM05D001391 ORTHO05D005432 2.3e-143 512.7 332 77.7
FvH4_4g30104 Fragaria vesca HOM05D001391 ORTHO05D005432 3.0e-143 512.3 350 74.0
HanXRQChr12g0375271 Helianthus annuus HOM05D001391 ORTHO05D005432 3.0e-143 512.3 361 70.4
BcaC04g21485 Brassica carinata HOM05D001391 ORTHO05D005432 3.9e-143 511.9 350 73.4
C09p31260 Brassica napus HOM05D001391 ORTHO05D005432 3.9e-143 511.9 350 73.4
BolC9t55982H Brassica oleracea HOM05D001391 ORTHO05D005432 3.9e-143 511.9 350 73.4
Aa31LG2G7090 Aethionema arabicum HOM05D001391 ORTHO05D005432 5.1e-143 511.5 356 71.3
Sp2g14420 Schrenkiella parvula HOM05D001391 ORTHO05D005432 6.7e-143 511.1 359 70.8
Carub.0005s0265 Capsella rubella HOM05D001391 ORTHO05D005432 8.7e-143 510.8 349 72.8
FAN17G2247 Fragaria x ananassa HOM05D001391 ORTHO05D002605 8.7e-143 510.8 351 73.5
RcHm_v2.0_Chr4g0438441 Rosa chinensis HOM05D001391 ORTHO05D005432 8.7e-143 510.8 349 73.6
BcaC03g17224 Brassica carinata HOM05D001391 ORTHO05D005432 1.1e-142 510.4 345 72.8
C02p51560 Brassica napus HOM05D001391 ORTHO05D005432 1.1e-142 510.4 345 72.8
BolC2t11243H Brassica oleracea HOM05D001391 ORTHO05D005432 1.1e-142 510.4 345 72.8
CANSAT64G0915 Cannabis sativa HOM05D001391 ORTHO05D005432 1.9e-142 509.6 326 76.4
TPR.G34031 Trifolium pratense HOM05D001391 ORTHO05D005432 2.5e-142 509.2 354 73.4
Thhalv10004477m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 5.6e-142 508.1 349 72.5
ATR0064G010 Amborella trichopoda HOM05D001391 ORTHO05D005432 7.4e-142 507.7 305 80.7
CARHR145860 Cardamine hirsuta HOM05D001391 ORTHO05D005432 9.6e-142 507.3 349 72.2
Zm00001eb393170 Zea mays HOM05D001391 ORTHO05D005432 9.6e-142 507.3 356 73.0
THA.LOC104805193 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 4.8e-141 505.0 351 72.9
Oeu048144.1 Olea europaea HOM05D001391 ORTHO05D005432 8.1e-141 504.2 315 79.7
RcHm_v2.0_Chr4g0438461 Rosa chinensis HOM05D001391 ORTHO05D005432 1.4e-140 503.4 329 75.1
QL03p071709 Quercus lobata HOM05D001391 ORTHO05D005432 3.1e-140 502.3 356 71.6
COL.COLO4_27891 Corchorus olitorius HOM05D001391 ORTHO05D005432 5.3e-140 501.5 364 70.9
Ah.02g126880 Amaranthus hybridus HOM05D001391 ORTHO05D005432 1.2e-139 500.4 358 70.4
PSO478G2440 Papaver somniferum HOM05D001391 ORTHO05D005432 3.4e-139 498.8 324 79.3
Gorai.013G093700 Gossypium raimondii HOM05D001391 ORTHO05D005432 2.9e-138 495.7 354 71.5
Lsat_1_v5_gn_3_53800 Lactuca sativa HOM05D001391 ORTHO05D005432 4.9e-138 495.0 357 68.9
AUR62003104 Chenopodium quinoa HOM05D001391 ORTHO05D005432 2.5e-137 492.7 313 76.0
Nitab4.5_0001487g0070 Nicotiana tabacum HOM05D001391 ORTHO05D005432 5.5e-137 491.5 339 75.8
Haze_11913 Corylus avellana HOM05D001391 ORTHO05D005432 7.1e-137 491.1 292 82.9
EL10Ac6g14993 Beta vulgaris HOM05D001391 ORTHO05D005432 9.3e-137 490.7 313 76.4
Gohir.D13G081800 Gossypium hirsutum HOM05D001391 ORTHO05D005432 3.5e-136 488.8 354 70.9
FAN22G1389 Fragaria x ananassa HOM05D001391 ORTHO05D005432 1.0e-135 487.3 347 72.3
unitig_22.g6493 Utricularia gibba HOM05D001391 ORTHO05D005432 1.3e-135 486.9 364 68.1
Nitab4.5_0000231g0390 Nicotiana tabacum HOM05D001391 ORTHO05D005432 3.9e-135 485.3 336 75.6
Zm00001eb020150 Zea mays HOM05D001391 ORTHO05D005432 1.5e-134 483.4 354 70.6
HPP92_020445 Vanilla planifolia HOM05D001391 ORTHO05D005432 4.3e-134 481.9 343 71.7
DCAR_030039 Daucus carota HOM05D001391 ORTHO05D005432 4.8e-133 478.4 330 73.9
SMO364G0146 Selaginella moellendorffii HOM05D001391 ORTHO05D005432 1.4e-132 476.9 296 79.1
Sabra08G0071900 Salix brachista HOM05D001391 ORTHO05D005432 5.3e-132 474.9 361 70.4
CsaV3_6G032550 Cucumis sativus L. HOM05D001391 ORTHO05D005432 2.6e-131 472.6 344 70.6
Pp3c1_8060 Physcomitrium patens HOM05D001391 ORTHO05D005432 1.3e-130 470.3 352 66.5
Pp3c2_37740 Physcomitrium patens HOM05D001391 ORTHO05D005432 2.5e-129 466.1 343 67.9
Hund05837 Selenicereus undatus HOM05D001391 ORTHO05D005432 4.2e-129 465.3 310 74.2
QL03p071737 Quercus lobata HOM05D001391 ORTHO05D005432 3.6e-128 462.2 339 70.5
Mapoly0041s0056 Marchantia polymorpha HOM05D001391 ORTHO05D005432 3.3e-126 455.7 349 66.5
Migut.L01194 Erythranthe guttata HOM05D001391 ORTHO05D005432 4.3e-126 455.3 319 72.4
QL03p071961 Quercus lobata HOM05D001391 ORTHO05D005432 9.7e-126 454.1 354 67.2
vmacro01316 Vaccinium macrocarpon HOM05D001391 ORTHO05D005432 1.6e-125 453.4 362 67.1
Nn4g23419 Nelumbo nucifera HOM05D001391 ORTHO05D005432 4.8e-125 451.8 352 68.5
Dinv16729 Davidia involucrata HOM05D001391 ORTHO05D005432 8.2e-125 451.1 296 77.7
Lj6C779T14 Lonicera japonica HOM05D001391 ORTHO05D005432 9.1e-124 447.6 401 60.6
AagrBONN_evm.TU.Sc2ySwM_228.3454 Anthoceros agrestis HOM05D001391 ORTHO05D005432 1.5e-123 446.8 333 66.7
Glyma.07G225600 Glycine max HOM05D001391 ORTHO05D005432 1.7e-122 443.4 271 81.2
Phvul.002G102100 Phaseolus vulgaris HOM05D001391 ORTHO05D005432 3.6e-120 435.6 298 73.5
Cpa.g.sc1.121 Carica papaya HOM05D001391 ORTHO05D005432 1.4e-119 433.7 358 65.9
CBR_g22084 Chara braunii HOM05D001391 ORTHO05D005432 3.0e-119 432.6 335 65.4
CsaV3_6G033630 Cucumis sativus L. HOM05D001391 ORTHO05D005432 1.3e-117 427.2 349 65.3
ClCG08G010360 Citrullus lanatus HOM05D001391 ORTHO05D005432 3.7e-117 425.6 313 70.0
Thhalv10022792m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 6.5e-114 414.8 349 61.0
Thhalv10022979m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 6.5e-114 414.8 349 61.0
MBI16_g24179_MAGBIO Magnolia biondii HOM05D001391 ORTHO05D005432 1.1e-110 404.1 354 63.6
Sc11g0002420 Simmondsia chinensis HOM05D001391 ORTHO05D005432 1.1e-108 397.5 295 69.8
Peaxi162Scf00175g00121 Petunia axillaris HOM05D001391 ORTHO05D005432 2.6e-107 392.9 245 78.0
AUR62007921 Chenopodium quinoa HOM05D001391 ORTHO05D005432 1.5e-105 387.1 314 63.1
Nn3g17437 Nelumbo nucifera HOM05D001391 ORTHO05D005432 5.5e-105 385.2 354 61.3
Solyc05g012340.4 Solanum lycopersicum HOM05D001391 ORTHO05D005432 5.5e-105 385.2 235 81.7
Eucgr.B03155 Eucalyptus grandis HOM05D001391 ORTHO05D005432 1.2e-104 384.0 243 79.0
Rhsim12G0074900 Rhododendron simsii HOM05D001391 ORTHO05D005432 8.8e-103 377.9 305 64.9
CDE02G0606 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 1.2e-94 350.9 217 78.3
Thecc.02G331800 Theobroma cacao HOM05D001391 ORTHO05D005432 1.2e-94 350.9 230 76.5
Gohir.A13G082200 Gossypium hirsutum HOM05D001391 ORTHO05D005432 7.7e-91 338.2 228 73.7
CSS0036366 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 1.7e-85 320.5 238 69.3
Eucgr.B03159 Eucalyptus grandis HOM05D001391 ORTHO05D005432 7.0e-76 288.5 197 75.6
Gohir.D12G164650 Gossypium hirsutum HOM05D001391 ORTHO05D005432 2.0e-70 270.4 262 59.2
HanXRQChr08g0223901 Helianthus annuus HOM05D001391 ORTHO05D005432 9.5e-65 251.5 180 71.7
Hund25181 Selenicereus undatus HOM05D001391 ORTHO05D005432 1.5e-62 244.2 173 69.4
Gorai.008G177300 Gossypium raimondii HOM05D001391 ORTHO05D005432 3.3e-57 226.5 167 71.9
SEGI_41081 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 2.2e-45 187.2 130 73.1
SEGI_06703 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 9.3e-44 181.8 130 71.5
SEGI_37700 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 1.1e-41 174.9 121 72.7
CSS0025210 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 7.3e-41 172.2 126 69.0
Hma1.2p1_1826F.1_g304410 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 1.3e-34 151.4 129 64.3
Gorai.008G177400 Gossypium raimondii HOM05D001391 ORTHO05D005432 2.4e-31 140.6 83 78.3
Hund25180 Selenicereus undatus HOM05D001391 ORTHO05D005432 6.9e-31 139.0 97 71.1
QL03p071882 Quercus lobata HOM05D001391 ORTHO05D005432 9.0e-31 138.7 117 66.7
Hma1.2p1_3404F.1_g335810 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 9.9e-30 135.2 118 65.3
QL01p050908 Quercus lobata HOM05D001391 ORTHO05D005432 3.2e-28 130.2 143 51.7
Mapoly0004s0019 Marchantia polymorpha HOM05D001391 ORTHO05D005432 4.8e-24 116.3 312 28.5
Gohir.A13G082366 Gossypium hirsutum HOM05D001391 ORTHO05D005432 2.4e-23 114.0 88 68.2
SEGI_28419 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 6.9e-23 112.5 86 61.6
Os03g0421400 Oryza sativa ssp. japonica HOM05D001391 ORTHO05D005432 1.5e-22 111.3 95 62.1
SEGI_38290 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 8.7e-18 95.5 56 71.4
SEGI_10839 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 2.5e-17 94.0 77 58.4
BcaB07g30295 Brassica carinata HOM05D001391 ORTHO05D005432 1.3e-16 91.7 79 64.6
MD16G1164500 Malus domestica HOM05D001391 ORTHO05D005432 2.2e-13 80.9 52 67.3
QL01p050911 Quercus lobata HOM05D001391 ORTHO05D005432 6.5e-13 79.3 73 61.6


User provided reference genes

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