Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 2.8e-64 248.4 124 100.0
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 2.1e-43 179.1 124 72.6
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 2.5e-36 155.6 97 77.3
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 4.1e-31 138.3 124 58.9
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 1.6e-30 136.3 124 57.3
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 4.5e-30 134.8 124 58.9
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 6.5e-29 131.0 121 56.2
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 6.5e-29 131.0 124 56.5
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 1.9e-28 129.4 124 57.3
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 4.2e-28 128.3 124 56.5
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 4.7e-27 124.8 124 54.0
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 6.1e-27 124.4 124 52.4
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 1.0e-26 123.6 124 50.8
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 1.8e-26 122.9 109 59.6
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 2.3e-26 122.5 115 56.5
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 3.0e-26 122.1 128 54.7
MBI10_g37696_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 2.0e-25 119.4 127 53.5
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 2.6e-25 119.0 120 48.3
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 5.7e-25 117.9 125 53.6
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 5.7e-25 117.9 120 50.8
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 1.3e-24 116.7 124 50.8
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.7e-24 116.3 125 49.6
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.7e-24 116.3 125 49.6
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 1.7e-24 116.3 128 52.3
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 2.2e-24 115.9 120 53.3
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 1.1e-23 113.6 128 47.7
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 7.0e-23 110.9 125 47.2
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 7.0e-23 110.9 126 50.8
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 2.0e-22 109.4 100 56.0
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 2.0e-22 109.4 100 56.0
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 4.5e-22 108.2 106 53.8
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 7.7e-22 107.5 125 51.2
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 2.9e-21 105.5 119 52.1
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 6.5e-21 104.4 90 60.0
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 8.5e-21 104.0 99 53.5
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 2.5e-20 102.4 104 53.8
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 4.2e-20 101.7 129 47.3
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 7.2e-20 100.9 129 49.6
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 7.2e-20 100.9 129 49.6
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 7.2e-20 100.9 109 48.6
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 7.2e-20 100.9 114 55.3
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.6e-19 99.8 126 49.2
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 1.6e-19 99.8 99 54.5
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.1e-19 99.4 123 47.2
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 3.6e-19 98.6 127 44.1
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 6.1e-19 97.8 129 49.6
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.8e-18 96.3 123 45.5
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 1.8e-18 96.3 103 47.6
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 2.3e-18 95.9 103 49.5
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 3.0e-18 95.5 125 45.6
Actinidia33410 Actinidia chinensis HOM05D007637 ORTHO05D009508 6.8e-18 94.4 102 52.0
TWI79G1694 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 6.8e-18 94.4 98 51.0
Actinidia31983 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.5e-17 93.2 91 56.0
Glyma.10G266100 Glycine max HOM05D007637 ORTHO05D009508 2.6e-17 92.4 120 43.3
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 4.4e-17 91.7 123 44.7
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 7.5e-17 90.9 104 52.9
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 7.5e-17 90.9 104 52.9
CiPaw.05G246900 Carya illinoinensis HOM05D007637 ORTHO05D009508 9.8e-17 90.5 99 49.5
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 1.3e-16 90.1 128 47.7
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 1.3e-16 90.1 92 56.5
QL01p002403 Quercus lobata HOM05D006556 ORTHO05D008146 1.7e-16 89.7 98 49.0
Thecc.04G124800 Theobroma cacao HOM05D007637 ORTHO05D009508 2.2e-16 89.4 96 50.0
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 4.8e-16 88.2 98 49.0
Glyma.20G124500 Glycine max HOM05D007637 ORTHO05D009508 4.8e-16 88.2 121 42.1
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 6.3e-16 87.8 128 44.5
TWI74G0234 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 6.3e-16 87.8 122 47.5
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.4e-15 86.7 129 41.9
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 1.8e-15 86.3 125 41.6
Phvul.007G035600 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 1.8e-15 86.3 119 37.0
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 1.8e-15 86.3 109 45.9
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 2.4e-15 85.9 118 44.1
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 3.1e-15 85.5 98 48.0
Solyc04g007585.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 2.0e-14 82.8 125 40.0
Lsat_1_v5_gn_4_155320 Lactuca sativa HOM05D007637 ORTHO05D009508 5.9e-14 81.3 122 37.7
Rhsim09G0068300 Rhododendron simsii HOM05D007637 ORTHO05D009508 5.9e-14 81.3 132 45.5
ATR0326G042 Amborella trichopoda HOM05D007637 ORTHO05D009508 7.7e-14 80.9 98 44.9
COL.COLO4_38443 Corchorus olitorius HOM05D007637 ORTHO05D009508 1.0e-13 80.5 76 60.5
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 1.0e-13 80.5 99 44.4
Actinidia15914 Actinidia chinensis HOM05D007637 ORTHO05D009508 2.9e-13 79.0 107 46.7
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 3.8e-13 78.6 103 43.7
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 6.5e-13 77.8 100 45.0
HanXRQChr09g0262411 Helianthus annuus HOM05D007637 ORTHO05D009508 8.5e-13 77.4 122 36.1
HanXRQChr09g0262421 Helianthus annuus HOM05D007637 ORTHO05D009508 1.9e-12 76.3 98 45.9
Eucgr.G02214 Eucalyptus grandis HOM05D007637 ORTHO05D009508 4.2e-12 75.1 92 48.9
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 4.2e-12 75.1 99 43.4
MBI16_g21183_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 2.7e-11 72.4 51 62.7
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 4.7e-11 71.6 129 37.2
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 6.1e-11 71.2 106 42.5
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 6.1e-11 71.2 106 42.5
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 6.1e-11 71.2 101 42.6
Nitab4.5_0002456g0080 Nicotiana tabacum HOM05D007637 ORTHO05D009508 4.0e-10 68.6 88 45.5
HanXRQChr11g0325281 Helianthus annuus HOM05D007637 ORTHO05D009508 6.8e-10 67.8 123 38.2
Glyma.10G112600 Glycine max HOM05D007637 ORTHO05D009508 5.7e-09 64.7 72 45.8
QL02p049171 Quercus lobata HOM05D007637 ORTHO05D009508 1.3e-08 63.5 51 58.8
arahy.Tifrunner.gnm1.ann1.NE5PRN Arachis hypogaea HOM05D026189 ORTHO05D009508 2.8e-08 62.4 120 35.0
arahy.Tifrunner.gnm1.ann1.4UH4YI Arachis hypogaea HOM05D026189 ORTHO05D009508 6.3e-08 61.2 120 35.8
Nitab4.5_0002644g0060 Nicotiana tabacum HOM05D007637 ORTHO05D009508 4.1e-07 58.5 75 48.0
ClCG05G022270 Citrullus lanatus HOM05D039188 ORTHO05D034722 2.0e-06 56.2 106 40.6
arahy.Tifrunner.gnm1.ann1.K3RR71 Arachis hypogaea HOM05D026189 ORTHO05D009508 5.9e-06 54.7 100 38.0


User provided reference genes

Program Settings