Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1464 Trochodendron aralioides HOM05D005241 ORTHO05D005862 1.9e-231 805.4 397 100.0
Dinv41292 Davidia involucrata HOM05D005241 ORTHO05D005862 1.7e-171 606.3 326 84.7
Atru.chr7.554 Acer truncatum HOM05D005241 ORTHO05D005862 5.6e-167 591.3 350 78.0
Nn7g37052 Nelumbo nucifera HOM05D005241 ORTHO05D005862 1.4e-165 586.6 411 70.6
Dinv42767 Davidia involucrata HOM05D005241 ORTHO05D005862 1.5e-164 583.2 330 82.4
Dinv43336 Davidia involucrata HOM05D005241 ORTHO05D005862 1.5e-164 583.2 330 82.4
Ciclev10008429m.g Citrus clementina HOM05D005241 ORTHO05D005862 2.0e-164 582.8 355 76.9
Actinidia24021 Actinidia chinensis HOM05D005241 ORTHO05D005862 5.8e-164 581.3 403 69.5
Duzib150G1634 Durio zibethinus HOM05D005241 ORTHO05D005862 1.3e-163 580.1 340 78.8
Manes.06G028800 Manihot esculenta HOM05D005241 ORTHO05D005862 2.5e-162 575.9 316 82.6
RcHm_v2.0_Chr4g0404611 Rosa chinensis HOM05D005241 ORTHO05D005862 5.5e-162 574.7 404 68.3
CiPaw.07G187700 Carya illinoinensis HOM05D005241 ORTHO05D005862 2.7e-161 572.4 316 83.9
Thecc.09G163500 Theobroma cacao HOM05D005241 ORTHO05D005862 2.3e-160 569.3 316 81.6
Gohir.D06G047501 Gossypium hirsutum HOM05D005241 ORTHO05D005862 3.0e-160 568.9 316 82.0
Gorai.010G053100 Gossypium raimondii HOM05D005241 ORTHO05D005862 5.1e-160 568.2 317 82.3
Gohir.A06G047300 Gossypium hirsutum HOM05D005241 ORTHO05D005862 6.7e-160 567.8 316 82.0
MBI18_g28946_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 3.3e-159 565.5 311 83.0
CSS0029475 Camellia sinensis var. sinensis HOM05D005241 ORTHO05D005862 9.6e-159 563.9 314 81.2
Lj9A730T54 Lonicera japonica HOM05D005241 ORTHO05D005862 1.3e-158 563.5 337 76.6
Sopen12g007320 Solanum pennellii HOM05D005241 ORTHO05D005862 1.3e-158 563.5 313 81.2
Potri.018G097100 Populus trichocarpa HOM05D005241 ORTHO05D005862 1.6e-158 563.1 310 81.9
Lalb_Chr07g0180171 Lupinus albus HOM05D005241 ORTHO05D005862 2.8e-158 562.4 316 79.7
SalBow6G2881 Salvia bowleyana HOM05D005241 ORTHO05D005862 2.8e-158 562.4 312 80.4
HanXRQChr06g0178861 Helianthus annuus HOM05D005241 ORTHO05D005862 3.7e-158 562.0 339 76.4
MD13G1261500 Malus domestica HOM05D005241 ORTHO05D005862 4.8e-158 561.6 399 68.2
Aqoxy4G03021 Aquilegia oxysepala HOM05D005241 ORTHO05D005862 6.2e-158 561.2 334 77.8
FAN07G2217 Fragaria x ananassa HOM05D005241 ORTHO05D005862 8.2e-158 560.8 404 68.1
Oeu043521.1 Olea europaea HOM05D005241 ORTHO05D005862 1.8e-157 559.7 313 80.8
COL.COLO4_16078 Corchorus olitorius HOM05D005241 ORTHO05D005862 2.4e-157 559.3 309 82.5
CDE10G0441 Ceratophyllum demersum HOM05D005241 ORTHO05D005862 4.0e-157 558.5 410 66.3
Haze_22151 Corylus avellana HOM05D005241 ORTHO05D005862 4.0e-157 558.5 336 77.7
FAN17G0752 Fragaria x ananassa HOM05D005241 ORTHO05D005862 1.2e-156 557.0 316 79.7
SGA_v2.0_scaffold66G22503 Striga asiatica HOM05D005241 ORTHO05D005862 1.5e-156 556.6 352 73.0
TWI34G1734 Tripterygium wilfordii HOM05D005241 ORTHO05D005862 1.5e-156 556.6 331 76.7
FvH4_4g09810 Fragaria vesca HOM05D005241 ORTHO05D005862 3.4e-156 555.4 316 80.1
FAN12G0682 Fragaria x ananassa HOM05D005241 ORTHO05D005862 3.4e-156 555.4 316 80.1
vmacro13085 Vaccinium macrocarpon HOM05D005241 ORTHO05D005862 5.8e-156 554.7 406 66.3
Solyc12g014440.2 Solanum lycopersicum HOM05D005241 ORTHO05D005862 7.6e-156 554.3 390 68.5
TWI34G0564 Tripterygium wilfordii HOM05D005241 ORTHO05D005862 1.0e-155 553.9 313 79.6
Glyma.13G092800 Glycine max HOM05D005241 ORTHO05D005862 3.8e-155 552.0 357 72.3
Lsat_1_v5_gn_8_65460 Lactuca sativa HOM05D005241 ORTHO05D005862 3.8e-155 552.0 311 80.4
COL.COLO4_16080 Corchorus olitorius HOM05D005241 ORTHO05D005862 4.9e-155 551.6 345 74.5
Sabra18G0084300 Salix brachista HOM05D005241 ORTHO05D005862 8.4e-155 550.8 336 76.2
PSO135G0092 Papaver somniferum HOM05D005241 ORTHO05D005862 1.1e-154 550.4 310 80.0
Glyma.17G067600 Glycine max HOM05D005241 ORTHO05D005862 2.5e-154 549.3 316 79.7
ATR0796G313 Amborella trichopoda HOM05D005241 ORTHO05D005862 3.2e-154 548.9 310 79.0
SalBow6G2671 Salvia bowleyana HOM05D005241 ORTHO05D005862 3.2e-154 548.9 305 80.3
Gohir.A05G345818 Gossypium hirsutum HOM05D005241 ORTHO05D005862 4.2e-154 548.5 337 75.7
DCAR_014714 Daucus carota HOM05D005241 ORTHO05D005862 1.2e-153 547.0 336 74.4
PGR102G1178 Punica granatum HOM05D005241 ORTHO05D005862 2.1e-153 546.2 312 77.2
QL02p096102 Quercus lobata HOM05D005241 ORTHO05D005862 2.1e-153 546.2 386 69.7
THA.LOC104813533 Tarenaya hassleriana HOM05D005241 ORTHO05D005862 2.1e-153 546.2 325 76.9
MSTRG.19688 Avicennia marina HOM05D005241 ORTHO05D005862 1.0e-152 543.9 313 78.0
Medtr4g129180 Medicago truncatula HOM05D005241 ORTHO05D005862 1.0e-152 543.9 316 78.2
Medtr4g129200 Medicago truncatula HOM05D005241 ORTHO05D005862 1.0e-152 543.9 317 78.5
PSO384G1775 Papaver somniferum HOM05D005241 ORTHO05D005862 1.0e-152 543.9 310 79.7
Thecc.09G163700 Theobroma cacao HOM05D005241 ORTHO05D005862 1.0e-152 543.9 347 72.6
TPR.G5349 Trifolium pratense HOM05D005241 ORTHO05D005862 1.0e-152 543.9 333 76.0
CANSAT11G2449 Cannabis sativa HOM05D005241 ORTHO05D005862 1.8e-152 543.1 310 78.4
Phvul.003G150000 Phaseolus vulgaris HOM05D005241 ORTHO05D005862 8.7e-152 540.8 316 78.2
Phvul.003G150200 Phaseolus vulgaris HOM05D005241 ORTHO05D005862 3.3e-151 538.9 330 76.1
Lj4g0014860 Lotus japonicus HOM05D005241 ORTHO05D005862 4.3e-151 538.5 308 79.5
Psat4g010840 Pisum sativum HOM05D005241 ORTHO05D005862 4.3e-151 538.5 316 76.9
CsaV3_1G029530 Cucumis sativus L. HOM05D005241 ORTHO05D005862 5.7e-151 538.1 313 77.3
Eucgr.C02440 Eucalyptus grandis HOM05D005241 ORTHO05D005862 5.7e-151 538.1 343 70.8
Psat4g010800 Pisum sativum HOM05D005241 ORTHO05D005862 5.7e-151 538.1 313 78.0
Ca_21190_v3 Cicer arietinum L. HOM05D005241 ORTHO05D005862 1.3e-150 537.0 333 73.6
Gorai.012G095700 Gossypium raimondii HOM05D005241 ORTHO05D005862 2.2e-150 536.2 331 76.1
Lalb_Chr07g0180161 Lupinus albus HOM05D005241 ORTHO05D005862 2.2e-150 536.2 353 70.5
arahy.Tifrunner.gnm1.ann1.RWXM46 Arachis hypogaea HOM05D005241 ORTHO05D005862 2.8e-150 535.8 325 76.0
PSO135G0726 Papaver somniferum HOM05D005241 ORTHO05D005862 4.8e-150 535.0 310 77.1
VMungo1215G3242 Vigna mungo HOM05D005241 ORTHO05D005862 1.4e-149 533.5 334 74.3
ECA236G3445 Erigeron canadensis HOM05D005241 ORTHO05D005862 1.8e-149 533.1 310 77.1
Gohir.D04G085700 Gossypium hirsutum HOM05D005241 ORTHO05D005862 1.8e-149 533.1 331 75.5
Rhsim01G0009500 Rhododendron simsii HOM05D005241 ORTHO05D005862 3.1e-149 532.3 382 69.1
AL8G33730 Arabidopsis lyrata HOM05D005241 ORTHO05D005862 1.5e-148 530.0 309 78.3
PSO135G0552 Papaver somniferum HOM05D005241 ORTHO05D005862 5.9e-148 528.1 310 76.1
arahy.Tifrunner.gnm1.ann1.4YP8RP Arachis hypogaea HOM05D005241 ORTHO05D005862 7.7e-148 527.7 333 73.6
Sp6g19390 Schrenkiella parvula HOM05D005241 ORTHO05D005862 1.0e-147 527.3 309 77.7
BolC3t13925H Brassica oleracea HOM05D005241 ORTHO05D005862 2.9e-147 525.8 309 77.3
ClCG06G012960 Citrullus lanatus HOM05D005241 ORTHO05D005862 3.8e-147 525.4 344 72.1
AT5G57700 Arabidopsis thaliana HOM05D005241 ORTHO05D005862 8.5e-147 524.2 309 77.0
C03p14830 Brassica napus HOM05D005241 ORTHO05D005862 8.5e-147 524.2 309 77.3
unitig_0.g567 Utricularia gibba HOM05D005241 ORTHO05D005862 1.1e-146 523.9 311 76.2
PSO384G2580 Papaver somniferum HOM05D005241 ORTHO05D005862 1.9e-146 523.1 310 75.8
CARHR271450 Cardamine hirsuta HOM05D005241 ORTHO05D005862 2.5e-146 522.7 308 76.6
Os07g0516000 Oryza sativa ssp. japonica HOM05D005241 ORTHO05D005862 3.2e-146 522.3 309 75.7
A03p12620 Brassica napus HOM05D005241 ORTHO05D005862 4.2e-146 521.9 309 77.3
BraA03t10577Z Brassica rapa HOM05D005241 ORTHO05D005862 1.6e-145 520.0 309 77.3
Cc06_g13790 Coffea canephora HOM05D005241 ORTHO05D005862 1.6e-145 520.0 310 77.7
Hund09015 Selenicereus undatus HOM05D005241 ORTHO05D005862 2.1e-145 519.6 308 75.0
Thhalv10013983m.g Eutrema salsugineum HOM05D005241 ORTHO05D005862 2.7e-145 519.2 309 77.0
HPP92_013485 Vanilla planifolia HOM05D005241 ORTHO05D005862 2.7e-145 519.2 355 69.0
Lj4g0023001 Lotus japonicus HOM05D005241 ORTHO05D005862 1.0e-144 517.3 348 70.4
Glyma.13G092900 Glycine max HOM05D005241 ORTHO05D005862 2.5e-143 512.7 316 76.3
Aa31LG3G13540 Aethionema arabicum HOM05D005241 ORTHO05D005862 2.2e-142 509.6 309 74.1
Peaxi162Scf00078g00547 Petunia axillaris HOM05D005241 ORTHO05D005862 1.1e-141 507.3 305 76.4
SEGI_10163 Sequoiadendron giganteum HOM05D005241 ORTHO05D005862 1.1e-141 507.3 312 75.0
EL10Ac8g18255 Beta vulgaris HOM05D005241 ORTHO05D005862 9.4e-138 494.2 304 74.7
AUR62040288 Chenopodium quinoa HOM05D005241 ORTHO05D005862 4.7e-137 491.9 304 75.3
Os07g0516050 Oryza sativa ssp. japonica HOM05D005241 ORTHO05D005862 1.4e-136 490.3 311 69.8
Nitab4.5_0000168g0090 Nicotiana tabacum HOM05D005241 ORTHO05D005862 3.1e-133 479.2 313 71.6
Nitab4.5_0006743g0030 Nicotiana tabacum HOM05D005241 ORTHO05D005862 1.2e-132 477.2 314 71.7
Hma1.2p1_0921F.1_g236680 Hydrangea macrophylla HOM05D005241 ORTHO05D005862 3.6e-129 465.7 368 63.0
Hma1.2p1_2604F.1_g325280 Hydrangea macrophylla HOM05D005241 ORTHO05D005862 1.4e-128 463.8 356 64.9
Peaxi162Scf00339g00098 Petunia axillaris HOM05D005241 ORTHO05D005862 4.4e-127 458.8 305 71.1
Sc08g0005390 Simmondsia chinensis HOM05D005241 ORTHO05D005862 3.7e-126 455.7 307 70.7
HPP92_026039 Vanilla planifolia HOM05D005241 ORTHO05D005862 3.7e-126 455.7 310 69.4
PGSC0003DMG400012851 Solanum tuberosum HOM05D005241 ORTHO05D005862 1.6e-124 450.3 305 69.2
Zm00001eb105910 Zea mays HOM05D005241 ORTHO05D005862 8.5e-123 444.5 284 69.4
SMO351G0057 Selaginella moellendorffii HOM05D005241 ORTHO05D005862 1.5e-122 443.7 306 66.0
Zm00001eb105960 Zea mays HOM05D005241 ORTHO05D005862 3.2e-122 442.6 274 71.5
Mapoly0080s0044 Marchantia polymorpha HOM05D005241 ORTHO05D005862 4.0e-120 435.6 310 63.2
FAN22G1361 Fragaria x ananassa HOM05D005241 ORTHO05D005862 7.5e-119 431.4 445 51.9
Sed0027242 Sechium edule HOM05D005241 ORTHO05D005862 1.1e-117 427.6 235 80.9
AUR62039979 Chenopodium quinoa HOM05D005241 ORTHO05D005862 4.1e-117 425.6 302 61.6
EL10Ac8g18254 Beta vulgaris HOM05D005241 ORTHO05D005862 7.0e-117 424.9 307 60.9
Pp3c3_37310 Physcomitrium patens HOM05D005241 ORTHO05D005862 7.7e-116 421.4 331 58.3
Hund26388 Selenicereus undatus HOM05D005241 ORTHO05D005862 1.4e-109 400.6 311 60.8
Migut.J01437 Erythranthe guttata HOM05D005241 ORTHO05D005862 4.1e-101 372.5 212 80.2
Cpa.g.sc450.6 Carica papaya HOM05D005241 ORTHO05D005862 5.0e-99 365.5 201 80.6
Carub.0008s1821 Capsella rubella HOM05D005241 ORTHO05D005862 1.0e-96 357.8 198 79.8
SEGI_04095 Sequoiadendron giganteum HOM05D005241 ORTHO05D005862 6.4e-94 348.6 214 73.4
MELO3C029512.2 Cucumis melo HOM05D005241 ORTHO05D005862 3.6e-89 332.8 251 62.9
Prupe.1G095300 Prunus persica HOM05D005241 ORTHO05D005862 4.9e-86 322.4 257 61.9
TPR.G5299 Trifolium pratense HOM05D005241 ORTHO05D005862 1.5e-82 310.8 186 75.8
TPR.G40451 Trifolium pratense HOM05D005241 ORTHO05D005862 3.6e-81 306.2 176 77.3
EL10Ac9g22414 Beta vulgaris HOM05D005241 ORTHO05D005862 2.4e-77 293.5 302 47.4
Nitab4.5_0000692g0020 Nicotiana tabacum HOM05D005241 ORTHO05D005862 7.1e-77 292.0 305 51.5
EL10Ac7g17876 Beta vulgaris HOM05D005241 ORTHO05D005862 8.1e-49 198.7 208 47.1
MELO3C017513.2 Cucumis melo HOM05D005241 ORTHO05D005862 3.4e-47 193.4 130 70.0
MBI18_g46216_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 1.8e-40 171.0 99 82.8
Hund09002 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.8e-35 154.5 94 72.3
Glyma.17G067650 Glycine max HOM05D005241 ORTHO05D005862 3.0e-35 153.7 87 75.9
Nn8g41235 Nelumbo nucifera HOM05D005241 ORTHO05D005862 3.4e-31 140.2 78 78.2
FAN12G2859 Fragaria x ananassa HOM05D005241 ORTHO05D005862 4.2e-29 133.3 73 82.2
MBI18_g29570_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 2.1e-28 131.0 91 68.1
Sc08g0005370 Simmondsia chinensis HOM05D005241 ORTHO05D005862 8.8e-27 125.6 79 74.7
SHI03002 Sapria himalayana HOM05D005241 ORTHO05D005862 9.7e-26 122.1 314 29.9
AagrBONN_evm.TU.Sc2ySwM_228.5641 Anthoceros agrestis HOM05D005241 ORTHO05D005862 1.4e-21 108.2 309 28.5
Peaxi162Scf00014g00192 Petunia axillaris HOM05D005241 ORTHO05D005862 1.5e-18 98.2 92 58.7
CBR_g30152 Chara braunii HOM05D010403 ORTHO05D005862 3.8e-14 83.6 240 26.7
CBR_g30241 Chara braunii HOM05D005241 ORTHO05D005862 1.2e-12 78.6 297 26.9
MBI18_g11928_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 6.7e-11 72.8 49 75.5
MBI19_g36862_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 1.7e-09 68.2 49 57.1
Peaxi162Scf00013g00004 Petunia axillaris HOM05D000090 ORTHO05D001322 1.7e-09 68.2 41 63.4
arahy.Tifrunner.gnm1.ann1.6LUE8P Arachis hypogaea HOM05D005241 ORTHO05D005862 2.6e-07 60.8 69 46.4


User provided reference genes

Program Settings