Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1456 Trochodendron aralioides HOM05D006376 ORTHO05D008046 1.8e-145 519.2 262 100.0
Nn3g18015 Nelumbo nucifera HOM05D006376 ORTHO05D008046 4.8e-98 361.7 266 71.4
Dinv13549 Davidia involucrata HOM05D006376 ORTHO05D008046 1.2e-96 357.1 257 71.6
GSVIVG01008377001 Vitis vinifera HOM05D006376 ORTHO05D008046 2.5e-91 339.3 259 67.6
Prupe.5G228200 Prunus persica HOM05D006376 ORTHO05D008046 6.3e-90 334.7 261 66.3
CiPaw.15G138400 Carya illinoinensis HOM05D006376 ORTHO05D008046 6.9e-89 331.3 262 66.4
CiPaw.15G139000 Carya illinoinensis HOM05D006376 ORTHO05D008046 1.5e-88 330.1 254 66.9
Atru.chr9.942 Acer truncatum HOM05D006376 ORTHO05D008046 3.4e-88 328.9 234 71.8
Actinidia02655 Actinidia chinensis HOM05D006376 ORTHO05D008046 2.9e-87 325.9 246 67.1
Oeu024338.1 Olea europaea HOM05D006376 ORTHO05D008046 3.8e-87 325.5 267 62.9
RhsimUnG0086600 Rhododendron simsii HOM05D006376 ORTHO05D008046 3.8e-87 325.5 266 66.9
QL10p027316 Quercus lobata HOM05D006376 ORTHO05D008046 8.5e-87 324.3 269 64.7
Cc04_g06670 Coffea canephora HOM05D006376 ORTHO05D008046 2.5e-86 322.8 259 63.3
Rhsim07G0069700 Rhododendron simsii HOM05D006376 ORTHO05D008046 3.2e-86 322.4 265 66.8
RcHm_v2.0_Chr7g0179071 Rosa chinensis HOM05D006376 ORTHO05D008046 4.7e-85 318.5 242 66.5
Aqoxy3G03987 Aquilegia oxysepala HOM05D006376 ORTHO05D008046 1.0e-84 317.4 255 65.9
Cpa.g.sc3.442 Carica papaya HOM05D006376 ORTHO05D008046 1.0e-84 317.4 264 62.9
Eucgr.B00851 Eucalyptus grandis HOM05D006376 ORTHO05D008046 1.0e-84 317.4 199 75.4
Lj9A422G67 Lonicera japonica HOM05D006376 ORTHO05D008046 1.0e-84 317.4 259 67.2
Gohir.D12G268200 Gossypium hirsutum HOM05D006376 ORTHO05D008046 1.4e-84 317.0 261 63.6
Gorai.008G288200 Gossypium raimondii HOM05D006376 ORTHO05D008046 1.8e-84 316.6 261 63.6
arahy.Tifrunner.gnm1.ann1.5Y9SE5 Arachis hypogaea HOM05D006376 ORTHO05D008046 2.3e-84 316.2 217 71.0
Rhsim07G0070500 Rhododendron simsii HOM05D006376 ORTHO05D008046 3.0e-84 315.8 267 64.8
Manes.14G168100 Manihot esculenta HOM05D006376 ORTHO05D008046 8.8e-84 314.3 266 64.3
Thecc.03G047000 Theobroma cacao HOM05D006376 ORTHO05D008046 8.8e-84 314.3 235 66.0
arahy.Tifrunner.gnm1.ann1.CZ5T9B Arachis hypogaea HOM05D006376 ORTHO05D008046 1.1e-83 313.9 217 70.0
TPR.G12760 Trifolium pratense HOM05D006376 ORTHO05D008046 1.5e-83 313.5 264 61.7
FvH4_5g16950 Fragaria vesca HOM05D006376 ORTHO05D008046 2.0e-83 313.2 242 65.3
FAN18G1549 Fragaria x ananassa HOM05D006376 ORTHO05D008046 2.0e-83 313.2 242 65.3
MELO3C017340.2 Cucumis melo HOM05D006376 ORTHO05D008046 2.6e-83 312.8 212 74.1
CsaV3_1G004140 Cucumis sativus L. HOM05D006376 ORTHO05D008046 7.4e-83 311.2 275 62.5
FAN08G1323 Fragaria x ananassa HOM05D006376 ORTHO05D008046 9.7e-83 310.8 242 65.3
AUR62029950 Chenopodium quinoa HOM05D006376 ORTHO05D008046 1.3e-82 310.5 239 65.7
MBI16_g21168_MAGBIO Magnolia biondii HOM05D006376 ORTHO05D008046 1.3e-82 310.5 261 64.8
Ciclev10009207m.g Citrus clementina HOM05D006376 ORTHO05D008046 1.7e-82 310.1 246 67.1
FAN13G1861 Fragaria x ananassa HOM05D006376 ORTHO05D008046 8.2e-82 307.8 242 64.0
Lj4g0006852 Lotus japonicus HOM05D006376 ORTHO05D008046 8.2e-82 307.8 226 69.0
Duzib205G0506 Durio zibethinus HOM05D006376 ORTHO05D008046 1.1e-81 307.4 235 66.4
FAN04G0856 Fragaria x ananassa HOM05D006376 ORTHO05D008046 1.1e-81 307.4 242 64.0
Nitab4.5_0001194g0140 Nicotiana tabacum HOM05D006376 ORTHO05D008046 1.1e-81 307.4 238 66.0
Nitab4.5_0012340g0010 Nicotiana tabacum HOM05D006376 ORTHO05D008046 1.1e-81 307.4 222 68.5
Lalb_Chr09g0330601 Lupinus albus HOM05D006376 ORTHO05D008046 4.1e-81 305.4 260 62.7
Hma1.2p1_0660F.1_g197700 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 7.0e-81 304.7 202 74.8
COL.COLO4_37647 Corchorus olitorius HOM05D006376 ORTHO05D008046 9.1e-81 304.3 261 61.7
Phvul.002G327000 Phaseolus vulgaris HOM05D006376 ORTHO05D008046 1.5e-80 303.5 253 62.5
vmacro17793 Vaccinium macrocarpon HOM05D006376 ORTHO05D008046 1.5e-80 303.5 286 59.8
PGR083G0770 Punica granatum HOM05D006376 ORTHO05D008046 2.0e-80 303.1 198 72.2
Hund02337 Selenicereus undatus HOM05D006376 ORTHO05D008046 2.6e-80 302.8 204 73.0
VMungo0251G1463 Vigna mungo HOM05D006376 ORTHO05D008046 4.5e-80 302.0 256 62.9
Lsat_1_v5_gn_8_3561 Lactuca sativa HOM05D006376 ORTHO05D008046 5.9e-80 301.6 250 61.6
Glyma.05G243300 Glycine max HOM05D006376 ORTHO05D008046 1.3e-79 300.4 240 64.2
TWI81G0521 Tripterygium wilfordii HOM05D006376 ORTHO05D008046 1.3e-79 300.4 269 62.1
AUR62033755 Chenopodium quinoa HOM05D006376 ORTHO05D008046 5.0e-79 298.5 245 61.6
CANSAT21G0790 Cannabis sativa HOM05D006376 ORTHO05D008046 1.1e-78 297.4 267 60.7
Peaxi162Scf00332g00023 Petunia axillaris HOM05D006376 ORTHO05D008046 1.1e-78 297.4 250 61.2
Solyc06g069030.3 Solanum lycopersicum HOM05D006376 ORTHO05D008046 1.1e-78 297.4 225 66.7
Medtr8g106690 Medicago truncatula HOM05D006376 ORTHO05D008046 1.4e-78 297.0 231 65.4
Psat7g004120 Pisum sativum HOM05D006376 ORTHO05D008046 4.2e-78 295.4 246 62.2
Haze_18787 Corylus avellana HOM05D006376 ORTHO05D008046 7.2e-78 294.7 203 71.4
Cfa019704 Carpinus fangiana HOM05D006376 ORTHO05D008046 9.4e-78 294.3 173 79.8
Potri.012G052300 Populus trichocarpa HOM05D006376 ORTHO05D008046 9.4e-78 294.3 267 60.7
MSTRG.4559 Avicennia marina HOM05D006376 ORTHO05D008046 1.2e-77 293.9 232 65.5
CAN.G423.18 Capsicum annuum HOM05D006376 ORTHO05D008046 3.6e-77 292.4 257 60.7
Glyma.08G051100 Glycine max HOM05D006376 ORTHO05D008046 3.6e-77 292.4 256 61.3
Sopen06g026320 Solanum pennellii HOM05D006376 ORTHO05D008046 3.6e-77 292.4 222 66.7
Sabra12G0035600 Salix brachista HOM05D006376 ORTHO05D008046 8.0e-77 291.2 263 60.8
PGSC0003DMG400028793 Solanum tuberosum HOM05D006376 ORTHO05D008046 8.0e-77 291.2 238 63.4
EL10Ac5g11519 Beta vulgaris HOM05D006376 ORTHO05D008046 6.7e-76 288.1 276 55.4
DCAR_014774 Daucus carota HOM05D006376 ORTHO05D008046 3.3e-75 285.8 203 67.0
THA.LOC104813912 Tarenaya hassleriana HOM05D006376 ORTHO05D008046 3.3e-75 285.8 219 66.7
ATR0691G291 Amborella trichopoda HOM05D006376 ORTHO05D008046 9.7e-75 284.3 213 70.0
PSO717G0073 Papaver somniferum HOM05D006376 ORTHO05D008046 9.7e-75 284.3 274 56.6
Sc04g0003270 Simmondsia chinensis HOM05D006376 ORTHO05D008046 9.7e-75 284.3 174 75.9
Thhalv10008687m.g Eutrema salsugineum HOM05D006376 ORTHO05D008046 1.3e-74 283.9 199 70.4
PSO675G4918 Papaver somniferum HOM05D006376 ORTHO05D008046 1.3e-74 283.9 268 57.1
A08p30580 Brassica napus HOM05D006376 ORTHO05D008046 2.8e-74 282.7 191 72.3
Carub.0001s1773 Capsella rubella HOM05D006376 ORTHO05D008046 3.7e-74 282.3 192 71.4
SGA_v2.0_scaffold171G38935 Striga asiatica HOM05D006376 ORTHO05D008046 3.7e-74 282.3 235 64.7
C08p18330 Brassica napus HOM05D006376 ORTHO05D008046 6.3e-74 281.6 191 72.3
BolC8t49467H Brassica oleracea HOM05D006376 ORTHO05D008046 6.3e-74 281.6 191 72.3
HanXRQChr05g0144491 Helianthus annuus HOM05D006376 ORTHO05D008046 6.3e-74 281.6 223 63.7
CDE03G0312 Ceratophyllum demersum HOM05D006376 ORTHO05D008046 8.2e-74 281.2 236 61.9
AL1G30420 Arabidopsis lyrata HOM05D006376 ORTHO05D008046 1.4e-73 280.4 191 70.7
ECA233G1742 Erigeron canadensis HOM05D006376 ORTHO05D008046 1.8e-73 280.0 213 63.8
Zm00001eb334810 Zea mays HOM05D006376 ORTHO05D008046 7.0e-73 278.1 250 60.0
CARHR018640 Cardamine hirsuta HOM05D006376 ORTHO05D008046 1.6e-72 276.9 199 67.8
BraA08t34989Z Brassica rapa HOM05D000280 ORTHO05D004091 5.9e-72 275.0 175 74.9
AT1G18060 Arabidopsis thaliana HOM05D006376 ORTHO05D008046 7.7e-72 274.6 199 67.8
Os01g0120500 Oryza sativa ssp. japonica HOM05D006376 ORTHO05D008046 3.8e-71 272.3 264 57.2
Lj3g0018404 Lotus japonicus HOM05D006376 ORTHO05D008046 3.6e-69 265.8 176 75.0
Duzib084G1315 Durio zibethinus HOM05D006376 ORTHO05D008046 1.4e-68 263.8 231 60.2
Aa31LG6G2990 Aethionema arabicum HOM05D006376 ORTHO05D008046 2.3e-68 263.1 210 64.3
HPP92_000150 Vanilla planifolia HOM05D006376 ORTHO05D008046 3.0e-68 262.7 175 72.6
BcaC07g38909 Brassica carinata HOM05D006376 ORTHO05D008046 1.1e-65 254.2 159 74.2
ClCG06G014480 Citrullus lanatus HOM05D006376 ORTHO05D008046 1.1e-65 254.2 264 53.0
Ca_17222_v3 Cicer arietinum L. HOM05D006376 ORTHO05D008046 4.1e-65 252.3 228 55.7
Gohir.A12G267700 Gossypium hirsutum HOM05D006376 ORTHO05D008046 1.6e-64 250.4 261 54.0
Sp1g16080 Schrenkiella parvula HOM05D006376 ORTHO05D008046 2.2e-63 246.5 147 76.9
SEGI_27865 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 4.2e-62 242.3 202 61.4
Migut.D01443 Erythranthe guttata HOM05D006376 ORTHO05D008046 2.4e-57 226.5 174 64.4
Pp3c8_21790 Physcomitrium patens HOM05D006376 ORTHO05D008046 5.9e-56 221.9 237 51.5
unitig_21.g20431 Utricularia gibba HOM05D006376 ORTHO05D008046 3.3e-54 216.1 189 59.3
AagrBONN_evm.TU.Sc2ySwM_340.32 Anthoceros agrestis HOM05D006376 ORTHO05D008046 1.6e-53 213.8 209 51.2
MD06G1223100 Malus domestica HOM05D006376 ORTHO05D008046 2.2e-50 203.4 120 75.0
Mapoly0001s0324 Marchantia polymorpha HOM05D006376 ORTHO05D008046 1.2e-48 197.6 181 50.3
SMO116G0316 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 2.0e-48 196.8 192 51.6
SMO164G0083 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 3.9e-47 192.6 179 53.1
SEGI_30520 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 5.6e-38 162.2 97 74.2
MD14G1232300 Malus domestica HOM05D006376 ORTHO05D008046 3.1e-36 156.4 169 58.0
Hma1.2p1_0660F.1_g197690 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 3.5e-32 142.9 149 60.4
Rhsim07G0070600 Rhododendron simsii HOM05D006376 ORTHO05D008046 1.1e-30 137.9 165 55.8
Thecc.03G047400 Theobroma cacao HOM05D006376 ORTHO05D008046 2.8e-29 133.3 169 51.5
PRCOL_00002665 Prasinoderma coloniale HOM05D006376 ORTHO05D008046 3.5e-24 116.3 171 39.2
Cre09.g401350 Chlamydomonas reinhardtii HOM05D006376 ORTHO05D008046 4.4e-19 99.4 174 34.5
arahy.Tifrunner.gnm1.ann1.Y3IZ58 Arachis hypogaea HOM05D006376 ORTHO05D008046 1.7e-18 97.4 124 52.4
arahy.Tifrunner.gnm1.ann1.8TB400 Arachis hypogaea HOM05D006376 ORTHO05D008046 2.2e-18 97.1 124 52.4
arahy.Tifrunner.gnm1.ann1.W819WZ Arachis hypogaea HOM05D006376 ORTHO05D008046 1.4e-17 94.4 126 50.0
arahy.Tifrunner.gnm1.ann1.VLX8JM Arachis hypogaea HOM05D006376 ORTHO05D008046 2.4e-17 93.6 141 46.8
arahy.Tifrunner.gnm1.ann1.FQ3MGU Arachis hypogaea HOM05D006376 ORTHO05D008046 4.2e-17 92.8 124 51.6
SEGI_17791 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 5.1e-15 85.9 155 35.5
arahy.Tifrunner.gnm1.ann1.XS5A0Y Arachis hypogaea HOM05D006376 ORTHO05D008046 7.6e-11 72.0 73 60.3
Dinv17636 Davidia involucrata HOM05D012663 ORTHO05D004533 2.2e-10 70.5 90 48.9
arahy.Tifrunner.gnm1.ann1.QNQ2AZ Arachis hypogaea HOM05D006376 ORTHO05D008046 6.4e-10 68.9 105 47.6
arahy.Tifrunner.gnm1.ann1.PN4BM4 Arachis hypogaea HOM05D001163 ORTHO05D001769 2.4e-09 67.0 105 47.6
SMO170G0025 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 1.1e-06 58.2 74 48.6
SMO137G0132 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 1.9e-06 57.4 63 52.4
VMungo0647G1967 Vigna mungo HOM05D006376 ORTHO05D008046 2.5e-06 57.0 39 82.1


User provided reference genes

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