Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 1.9e-135 485.7 228 100.0
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 1.2e-81 307.0 242 64.9
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 6.7e-80 301.2 201 70.1
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 5.0e-75 285.0 201 67.7
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 1.2e-73 280.4 201 67.7
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 4.6e-73 278.5 201 66.2
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 1.8e-72 276.6 200 68.0
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 5.1e-72 275.0 200 68.0
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 1.5e-71 273.5 201 64.7
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 1.5e-71 273.5 200 66.0
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 2.0e-71 273.1 199 64.8
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 5.7e-71 271.6 199 64.8
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 9.7e-71 270.8 201 65.2
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 1.3e-70 270.4 201 63.7
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.2e-70 269.6 199 64.8
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.2e-70 269.6 199 64.8
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 6.3e-70 268.1 201 64.7
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 1.4e-69 266.9 201 64.7
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 3.1e-69 265.8 200 62.5
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 1.5e-68 263.5 192 65.6
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 4.5e-68 261.9 197 62.4
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 7.7e-68 261.2 202 63.4
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 1.0e-67 260.8 198 64.6
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 1.0e-67 260.8 201 62.7
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 1.0e-67 260.8 201 65.2
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 1.3e-67 260.4 193 66.3
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 2.2e-67 259.6 202 62.9
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 2.9e-67 259.2 202 61.9
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 5.0e-67 258.5 210 60.5
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 8.5e-67 257.7 195 64.1
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 8.5e-67 257.7 198 63.1
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 1.1e-66 257.3 200 62.0
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 7.2e-66 254.6 196 62.8
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 1.2e-65 253.8 201 61.2
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 3.6e-65 252.3 203 62.1
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 1.4e-64 250.4 200 58.5
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 1.8e-64 250.0 200 60.0
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 3.0e-64 249.2 201 61.7
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 2.6e-63 246.1 201 59.2
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 3.3e-63 245.7 200 63.0
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 4.4e-63 245.4 198 60.6
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 5.7e-63 245.0 203 59.6
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 5.7e-63 245.0 194 57.7
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 9.7e-63 244.2 194 57.2
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 9.7e-63 244.2 200 56.0
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 1.3e-62 243.8 203 60.6
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 1.7e-62 243.4 202 59.4
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 2.8e-62 242.7 207 59.9
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 4.8e-62 241.9 203 60.1
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 4.8e-62 241.9 197 60.4
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 6.3e-62 241.5 197 58.9
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 6.3e-62 241.5 201 57.7
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 1.1e-61 240.7 200 60.0
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 1.1e-61 240.7 197 60.4
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 1.8e-61 240.0 203 58.1
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 3.1e-61 239.2 205 57.6
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 9.1e-61 237.7 200 55.5
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 9.1e-61 237.7 199 60.3
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 1.5e-60 236.9 200 55.0
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 1.5e-60 236.9 194 60.8
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 5.9e-60 235.0 271 49.4
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 1.0e-59 234.2 207 58.9
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 1.3e-59 233.8 200 55.0
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 1.7e-59 233.4 195 56.4
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 1.7e-59 233.4 193 57.5
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 3.8e-59 232.3 197 57.4
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 5.0e-59 231.9 205 53.7
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 1.1e-58 230.7 202 59.9
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 5.5e-58 228.4 212 55.7
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 5.5e-58 228.4 200 56.5
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 7.2e-58 228.0 200 56.5
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 9.4e-58 227.6 210 52.4
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 9.4e-58 227.6 167 67.1
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 3.6e-57 225.7 201 56.7
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 3.6e-57 225.7 242 50.0
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 4.7e-57 225.3 167 64.7
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 4.7e-57 225.3 196 57.1
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 6.1e-57 224.9 202 56.9
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 1.4e-56 223.8 202 56.4
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.4e-56 223.8 167 64.1
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 1.1e-55 220.7 201 55.2
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 9.7e-55 217.6 160 66.9
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 2.2e-54 216.5 160 66.2
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 4.1e-53 212.2 168 59.5
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 2.0e-52 209.9 219 51.6
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 2.0e-52 209.9 199 52.8
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 2.2e-51 206.5 167 60.5
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 1.6e-49 200.3 173 54.9
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 2.1e-49 199.9 201 53.2
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 3.6e-49 199.1 172 55.8
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 2.3e-48 196.4 197 55.3
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 1.5e-47 193.7 169 55.6
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 1.3e-46 190.7 179 54.2
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 2.2e-46 189.9 164 58.5
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 4.1e-45 185.7 166 53.6
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 9.1e-45 184.5 162 58.6
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 9.1e-45 184.5 197 50.3
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 9.1e-45 184.5 197 50.3
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 2.7e-44 183.0 162 56.2
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 2.7e-44 183.0 162 56.2
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 3.5e-44 182.6 197 48.7
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 4.5e-44 182.2 161 55.9
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 4.5e-44 182.2 158 53.2
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 1.0e-43 181.0 160 56.2
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 8.5e-43 177.9 161 55.3
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 5.5e-42 175.3 165 50.9
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 2.1e-41 173.3 200 48.5
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 2.3e-40 169.9 164 53.7
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 6.8e-40 168.3 172 51.7
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 4.5e-36 155.6 194 42.3
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 2.3e-35 153.3 176 45.5
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 5.2e-32 142.1 111 64.0
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 1.7e-30 137.1 111 62.2
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 2.3e-27 126.7 102 60.8
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 1.5e-18 97.4 200 34.0
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 1.4e-16 90.9 54 66.7
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 2.1e-12 77.0 44 65.9


User provided reference genes

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